RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 FRMD1Q8N878 549 aa15.78■□□□□ 0.12
SPG7-218ENST00000568205 LRRN4CLQ8ND94 238 aa15.78■□□□□ 0.12
SPG7-218ENST00000568205 SNF8Q96H20 258 aa15.78■□□□□ 0.12
SPG7-218ENST00000568205 LYSMD1Q96S90 227 aa15.78■□□□□ 0.12
SPG7-218ENST00000568205 ARNT2Q9HBZ2 717 aa15.78■□□□□ 0.12
SPG7-218ENST00000568205 PREBQ9HCU5 417 aa15.78■□□□□ 0.12
SPG7-218ENST00000568205 ZSCAN32Q9NX65 697 aa15.78■□□□□ 0.12
SPG7-218ENST00000568205 MBD1Q9UIS9 605 aaPredicted RBP15.78■□□□□ 0.12
SPG7-218ENST00000568205 GGT7Q9UJ14 662 aa15.78■□□□□ 0.12
SPG7-218ENST00000568205 TPX2Q9ULW0 747 aaKnown RBP15.78■□□□□ 0.12
SPG7-218ENST00000568205 ZNF318Q5VUA4 2279 aa15.78■□□□□ 0.12
SPG7-218ENST00000568205 NPIPB15A6NHN6 443 aaPredicted RBP15.77■□□□□ 0.12
SPG7-218ENST00000568205 LRRC72A6NJI9 287 aa15.77■□□□□ 0.12
SPG7-218ENST00000568205 TSPAN6O43657 245 aa15.77■□□□□ 0.12
SPG7-218ENST00000568205 TMEM63AO94886 807 aa15.77■□□□□ 0.12
SPG7-218ENST00000568205 PIRTP0C851 137 aa15.77■□□□□ 0.12
SPG7-218ENST00000568205 CYP2A6P11509 494 aaPredicted RBP15.77■□□□□ 0.12
SPG7-218ENST00000568205 VIPR1P32241 457 aa15.77■□□□□ 0.12
SPG7-218ENST00000568205 GRIA1P42261 906 aa15.77■□□□□ 0.12
SPG7-218ENST00000568205 RPL21P46778 160 aaKnown RBP15.77■□□□□ 0.12
SPG7-218ENST00000568205 PTPRRQ15256 657 aa15.77■□□□□ 0.12
SPG7-218ENST00000568205 TMEM52BQ4KMG9 183 aa15.77■□□□□ 0.12
SPG7-218ENST00000568205 GLE1Q53GS7 698 aaKnown RBP15.77■□□□□ 0.12
SPG7-218ENST00000568205 DUPD1Q68J44 220 aa15.77■□□□□ 0.12
SPG7-218ENST00000568205 PPP1R21Q6ZMI0 780 aa15.77■□□□□ 0.12
SPG7-218ENST00000568205 PPIL6Q8IXY8 311 aa15.77■□□□□ 0.12
SPG7-218ENST00000568205 NAT8LQ8N9F0 302 aa15.77■□□□□ 0.12
SPG7-218ENST00000568205 OR52K1Q8NGK4 314 aa15.77■□□□□ 0.12
SPG7-218ENST00000568205 OR2T34Q8NGX1 318 aa15.77■□□□□ 0.12
SPG7-218ENST00000568205 GPR174Q9BXC1 333 aa15.77■□□□□ 0.12
SPG7-218ENST00000568205 RAB17Q9H0T7 212 aa15.77■□□□□ 0.12
SPG7-218ENST00000568205 DPH5Q9H2P9 285 aa15.77■□□□□ 0.12
SPG7-218ENST00000568205 KDM4CQ9H3R0 1056 aa15.77■□□□□ 0.12
SPG7-218ENST00000568205 SNX24Q9Y343 169 aa15.77■□□□□ 0.12
SPG7-218ENST00000568205 UTP11Q9Y3A2 253 aaKnown RBP15.77■□□□□ 0.12
SPG7-218ENST00000568205 SPO11Q9Y5K1 396 aa15.77■□□□□ 0.12
SPG7-218ENST00000568205 KMT2EQ8IZD2 1858 aa15.77■□□□□ 0.11
SPG7-218ENST00000568205 TBC1D3DA0A087WVF3 549 aa15.76■□□□□ 0.11
SPG7-218ENST00000568205 TBC1D3IA0A087WXS9 549 aa15.76■□□□□ 0.11
SPG7-218ENST00000568205 TBC1D3EA0A087X179 549 aa15.76■□□□□ 0.11
SPG7-218ENST00000568205 TBC1D3KA0A087X1G2 549 aa15.76■□□□□ 0.11
SPG7-218ENST00000568205 TBC1D3FA6NER0 549 aaPredicted RBP15.76■□□□□ 0.11
SPG7-218ENST00000568205 PRR23AA6NEV1 266 aa15.76■□□□□ 0.11
SPG7-218ENST00000568205 FAM47DPA6NHR8 397 aa15.76■□□□□ 0.11
SPG7-218ENST00000568205 A8MX80 341 aa15.76■□□□□ 0.11
SPG7-218ENST00000568205 TBC1D3LB9A6J9 549 aa15.76■□□□□ 0.11
SPG7-218ENST00000568205 RPP40O75818 363 aaKnown RBP15.76■□□□□ 0.11
SPG7-218ENST00000568205 SEC31AO94979 1220 aaKnown RBP15.76■□□□□ 0.11
SPG7-218ENST00000568205 HEXIM1O94992 359 aaKnown RBP15.76■□□□□ 0.11
SPG7-218ENST00000568205 PCDH8O95206 1070 aa15.76■□□□□ 0.11
SPG7-218ENST00000568205 TBC1D3HP0C7X1 549 aa15.76■□□□□ 0.11
SPG7-218ENST00000568205 BCKDHBP21953 392 aa15.76■□□□□ 0.11
SPG7-218ENST00000568205 SARNPP82979 210 aaKnown RBP15.76■□□□□ 0.11
SPG7-218ENST00000568205 SLC7A5Q01650 507 aa15.76■□□□□ 0.11
SPG7-218ENST00000568205 CDH17Q12864 832 aa15.76■□□□□ 0.11
SPG7-218ENST00000568205 RALGDSQ12967 914 aa15.76■□□□□ 0.11
SPG7-218ENST00000568205 TBC1D3GQ6DHY5 549 aa15.76■□□□□ 0.11
SPG7-218ENST00000568205 TBC1D3CQ6IPX1 549 aa15.76■□□□□ 0.11
SPG7-218ENST00000568205 NEK5Q6P3R8 708 aa15.76■□□□□ 0.11
SPG7-218ENST00000568205 CRTC1Q6UUV9 634 aa15.76■□□□□ 0.11
SPG7-218ENST00000568205 SLC36A4Q6YBV0 504 aa15.76■□□□□ 0.11
SPG7-218ENST00000568205 PCGF5Q86SE9 256 aa15.76■□□□□ 0.11
SPG7-218ENST00000568205 TSPAN33Q86UF1 283 aa15.76■□□□□ 0.11
SPG7-218ENST00000568205 C11orf74Q86VG3 221 aa15.76■□□□□ 0.11
SPG7-218ENST00000568205 HOOK3Q86VS8 718 aa15.76■□□□□ 0.11
SPG7-218ENST00000568205 TBC1D3Q8IZP1 549 aaPredicted RBP15.76■□□□□ 0.11
SPG7-218ENST00000568205 DNAAF3Q8N9W5 541 aa15.76■□□□□ 0.11
SPG7-218ENST00000568205 ZBTB44Q8NCP5 570 aa15.76■□□□□ 0.11
SPG7-218ENST00000568205 MCUQ8NE86 351 aa15.76■□□□□ 0.11
SPG7-218ENST00000568205 GAB3Q8WWW8 586 aa15.76■□□□□ 0.11
SPG7-218ENST00000568205 SRPK1Q96SB4 655 aaKnown RBP15.76■□□□□ 0.11
SPG7-218ENST00000568205 WRAP53Q9BUR4 548 aaKnown RBP15.76■□□□□ 0.11
SPG7-218ENST00000568205 MAGEE1Q9HCI5 957 aa15.76■□□□□ 0.11
SPG7-218ENST00000568205 CASS4Q9NQ75 786 aa15.76■□□□□ 0.11
SPG7-218ENST00000568205 PCDHGA2Q9Y5H1 932 aa15.76■□□□□ 0.11
SPG7-218ENST00000568205 CACNA1HO95180 2353 aa15.76■□□□□ 0.11
SPG7-218ENST00000568205 C10orf142B7Z368 130 aa15.75■□□□□ 0.11
SPG7-218ENST00000568205 NDC80O14777 642 aa15.75■□□□□ 0.11
SPG7-218ENST00000568205 MAP3K13O43283 966 aa15.75■□□□□ 0.11
SPG7-218ENST00000568205 RNGTTO60942 597 aaKnown RBP15.75■□□□□ 0.11
SPG7-218ENST00000568205 NDUFS2O75306 463 aa15.75■□□□□ 0.11
SPG7-218ENST00000568205 LHCGRP22888 699 aa15.75■□□□□ 0.11
SPG7-218ENST00000568205 CNR2P34972 360 aa15.75■□□□□ 0.11
SPG7-218ENST00000568205 ITGA8P53708 1063 aa15.75■□□□□ 0.11
SPG7-218ENST00000568205 RPL6Q02878 288 aaKnown RBP15.75■□□□□ 0.11
SPG7-218ENST00000568205 SRSF5Q13243 272 aaKnown RBP15.75■□□□□ 0.11
SPG7-218ENST00000568205 MORF4L2Q15014 288 aa15.75■□□□□ 0.11
SPG7-218ENST00000568205 CNGA3Q16281 694 aa15.75■□□□□ 0.11
SPG7-218ENST00000568205 KIAA1161Q6NSJ0 714 aa15.75■□□□□ 0.11
SPG7-218ENST00000568205 ZNF534Q76KX8 674 aa15.75■□□□□ 0.11
SPG7-218ENST00000568205 HORMAD1Q86X24 394 aa15.75■□□□□ 0.11
SPG7-218ENST00000568205 BBOF1Q8ND07 529 aa15.75■□□□□ 0.11
SPG7-218ENST00000568205 BLOC1S5Q8TDH9 187 aa15.75■□□□□ 0.11
SPG7-218ENST00000568205 CXorf40AQ8TE69 158 aa15.75■□□□□ 0.11
SPG7-218ENST00000568205 PRRX2Q99811 253 aa15.75■□□□□ 0.11
SPG7-218ENST00000568205 PCED1AQ9H1Q7 454 aa15.75■□□□□ 0.11
SPG7-218ENST00000568205 TRABDQ9H4I3 376 aa15.75■□□□□ 0.11
SPG7-218ENST00000568205 C6orf106Q9H6K1 298 aaPredicted RBP15.75■□□□□ 0.11
SPG7-218ENST00000568205 XAB2Q9HCS7 855 aaKnown RBP15.75■□□□□ 0.11
SPG7-218ENST00000568205 PIH1D1Q9NWS0 290 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms