RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 NOCTQ9UK39 431 aaKnown RBP15.59■□□□□ 0.09
PALB2-205ENST00000567003 DAAM1Q9Y4D1 1078 aa15.59■□□□□ 0.09
PALB2-205ENST00000567003 TSPAN11A1L157 253 aa15.58■□□□□ 0.08
PALB2-205ENST00000567003 GFPT2O94808 682 aa15.58■□□□□ 0.08
PALB2-205ENST00000567003 CCL4P13236 92 aa15.58■□□□□ 0.08
PALB2-205ENST00000567003 UCHL3P15374 230 aa15.58■□□□□ 0.08
PALB2-205ENST00000567003 GLB1P16278 677 aa15.58■□□□□ 0.08
PALB2-205ENST00000567003 EPHB2P29323 1055 aa15.58■□□□□ 0.08
PALB2-205ENST00000567003 PTPN9P43378 593 aa15.58■□□□□ 0.08
PALB2-205ENST00000567003 RGRP47804 291 aa15.58■□□□□ 0.08
PALB2-205ENST00000567003 MAZP56270 477 aaKnown RBP15.58■□□□□ 0.08
PALB2-205ENST00000567003 FMO1Q01740 532 aa15.58■□□□□ 0.08
PALB2-205ENST00000567003 MTM1Q13496 603 aa15.58■□□□□ 0.08
PALB2-205ENST00000567003 HLTFQ14527 1009 aaKnown RBP eCLIP15.58■□□□□ 0.082e-6■■□□□ 13.6
PALB2-205ENST00000567003 UGP2Q16851 508 aa15.58■□□□□ 0.08
PALB2-205ENST00000567003 AMZ1Q400G9 498 aa15.58■□□□□ 0.08
PALB2-205ENST00000567003 MAP9Q49MG5 647 aa15.58■□□□□ 0.08
PALB2-205ENST00000567003 C14orf28Q4W4Y0 310 aa15.58■□□□□ 0.08
PALB2-205ENST00000567003 SPECC1LQ69YQ0 1117 aa15.58■□□□□ 0.08
PALB2-205ENST00000567003 STRADAQ7RTN6 431 aa15.58■□□□□ 0.08
PALB2-205ENST00000567003 DTX1Q86Y01 620 aa15.58■□□□□ 0.08
PALB2-205ENST00000567003 PTRH1Q86Y79 214 aaKnown RBP15.58■□□□□ 0.08
PALB2-205ENST00000567003 CAMK1DQ8IU85 385 aa15.58■□□□□ 0.08
PALB2-205ENST00000567003 PELI3Q8N2H9 469 aa15.58■□□□□ 0.08
PALB2-205ENST00000567003 OR6C4Q8NGE1 309 aa15.58■□□□□ 0.08
PALB2-205ENST00000567003 CENPIQ92674 756 aaPredicted RBP15.58■□□□□ 0.08
PALB2-205ENST00000567003 TUBGCP2Q9BSJ2 902 aa15.58■□□□□ 0.08
PALB2-205ENST00000567003 SUV39H2Q9H5I1 410 aa15.58■□□□□ 0.08
PALB2-205ENST00000567003 LRIT1Q9P2V4 623 aa15.58■□□□□ 0.08
PALB2-205ENST00000567003 MOSPD1Q9UJG1 213 aa15.58■□□□□ 0.08
PALB2-205ENST00000567003 APPL1Q9UKG1 709 aa15.58■□□□□ 0.08
PALB2-205ENST00000567003 DGKBQ9Y6T7 804 aa15.58■□□□□ 0.08
PALB2-205ENST00000567003 CREB3O43889 395 aa15.57■□□□□ 0.08
PALB2-205ENST00000567003 CYP1A1P04798 512 aaPredicted RBP15.57■□□□□ 0.08
PALB2-205ENST00000567003 MMP8P22894 467 aa15.57■□□□□ 0.08
PALB2-205ENST00000567003 KLK7P49862 253 aa15.57■□□□□ 0.08
PALB2-205ENST00000567003 OR1D5P58170 312 aa15.57■□□□□ 0.08
PALB2-205ENST00000567003 B4GALNT1Q00973 533 aa15.57■□□□□ 0.08
PALB2-205ENST00000567003 TLE1Q04724 770 aa15.57■□□□□ 0.08
PALB2-205ENST00000567003 RALGDSQ12967 914 aa15.57■□□□□ 0.08
PALB2-205ENST00000567003 SERINC3Q13530 473 aa15.57■□□□□ 0.08
PALB2-205ENST00000567003 ARHGEF7Q14155 803 aa15.57■□□□□ 0.08
PALB2-205ENST00000567003 INO80DQ53TQ3 878 aaPredicted RBP15.57■□□□□ 0.08
PALB2-205ENST00000567003 SMYD5Q6GMV2 418 aa15.57■□□□□ 0.08
PALB2-205ENST00000567003 ERAP2Q6P179 960 aa15.57■□□□□ 0.08
PALB2-205ENST00000567003 OGFOD3Q6PK18 319 aa15.57■□□□□ 0.08
PALB2-205ENST00000567003 XKR5Q6UX68 686 aa15.57■□□□□ 0.08
PALB2-205ENST00000567003 ZSCAN1Q8NBB4 408 aa15.57■□□□□ 0.08
PALB2-205ENST00000567003 RCBTB1Q8NDN9 531 aa15.57■□□□□ 0.08
PALB2-205ENST00000567003 OR56A4Q8NGH8 313 aa15.57■□□□□ 0.08
PALB2-205ENST00000567003 ATL2Q8NHH9 583 aa15.57■□□□□ 0.08
PALB2-205ENST00000567003 CASKIN2Q8WXE0 1202 aa15.57■□□□□ 0.08
PALB2-205ENST00000567003 CMKLR1Q99788 373 aa15.57■□□□□ 0.08
PALB2-205ENST00000567003 DPEP2Q9H4A9 486 aa15.57■□□□□ 0.08
PALB2-205ENST00000567003 RETREG1Q9H6L5 497 aa15.57■□□□□ 0.08
PALB2-205ENST00000567003 UBA2Q9UBT2 640 aaPredicted RBP15.57■□□□□ 0.08
PALB2-205ENST00000567003 ATP8A1Q9Y2Q0 1164 aa15.57■□□□□ 0.08
PALB2-205ENST00000567003 A8MX80 341 aa15.56■□□□□ 0.08
PALB2-205ENST00000567003 J3KR12 359 aa15.56■□□□□ 0.08
PALB2-205ENST00000567003 B4GAT1O43505 415 aa15.56■□□□□ 0.08
PALB2-205ENST00000567003 PPFIA2O75334 1257 aa15.56■□□□□ 0.08
PALB2-205ENST00000567003 RECQL5O94762 991 aaPredicted RBP15.56■□□□□ 0.08
PALB2-205ENST00000567003 GM2AP17900 193 aa15.56■□□□□ 0.08
PALB2-205ENST00000567003 RFC1P35251 1148 aaPredicted RBP15.56■□□□□ 0.08
PALB2-205ENST00000567003 ARSDP51689 593 aa15.56■□□□□ 0.08
PALB2-205ENST00000567003 KIAA1024LP59773 190 aa15.56■□□□□ 0.08
PALB2-205ENST00000567003 PTP4A2Q12974 167 aa15.56■□□□□ 0.08
PALB2-205ENST00000567003 CFAP58Q5T655 872 aa15.56■□□□□ 0.08
PALB2-205ENST00000567003 SCYL2Q6P3W7 929 aa15.56■□□□□ 0.08
PALB2-205ENST00000567003 SLFN11Q7Z7L1 901 aa15.56■□□□□ 0.08
PALB2-205ENST00000567003 DNAAF5Q86Y56 855 aa15.56■□□□□ 0.08
PALB2-205ENST00000567003 NTAN1Q96AB6 310 aa15.56■□□□□ 0.08
PALB2-205ENST00000567003 CELF6Q96J87 481 aaKnown RBP15.56■□□□□ 0.08
PALB2-205ENST00000567003 PCDHB18PQ96TA0 734 aa15.56■□□□□ 0.08
PALB2-205ENST00000567003 SEMA3CQ99985 751 aa15.56■□□□□ 0.08
PALB2-205ENST00000567003 NUDT22Q9BRQ3 303 aa15.56■□□□□ 0.08
PALB2-205ENST00000567003 LGR4Q9BXB1 951 aa15.56■□□□□ 0.08
PALB2-205ENST00000567003 STK33Q9BYT3 514 aa15.56■□□□□ 0.08
PALB2-205ENST00000567003 PDFQ9HBH1 243 aa15.56■□□□□ 0.08
PALB2-205ENST00000567003 CYP4F12Q9HCS2 524 aa15.56■□□□□ 0.08
PALB2-205ENST00000567003 PCDHB11Q9Y5F2 797 aa15.56■□□□□ 0.08
PALB2-205ENST00000567003 A0A1W2PQC6 194 aa15.55■□□□□ 0.08
PALB2-205ENST00000567003 CACNB4O00305 520 aaPredicted RBP15.55■□□□□ 0.08
PALB2-205ENST00000567003 CCP110O43303 1012 aa15.55■□□□□ 0.08
PALB2-205ENST00000567003 GPD1P21695 349 aa15.55■□□□□ 0.08
PALB2-205ENST00000567003 SUOXP51687 545 aa15.55■□□□□ 0.08
PALB2-205ENST00000567003 CDR2Q01850 454 aa15.55■□□□□ 0.08
PALB2-205ENST00000567003 AGERQ15109 404 aa15.55■□□□□ 0.08
PALB2-205ENST00000567003 SKIDA1Q1XH10 827 aa15.55■□□□□ 0.08
PALB2-205ENST00000567003 ZNF574Q6ZN55 896 aaPredicted RBP15.55■□□□□ 0.08
PALB2-205ENST00000567003 FAM114A1Q8IWE2 563 aa15.55■□□□□ 0.08
PALB2-205ENST00000567003 SLC25A18Q9H1K4 315 aa15.55■□□□□ 0.08
PALB2-205ENST00000567003 GANQ9H2C0 597 aa15.55■□□□□ 0.08
PALB2-205ENST00000567003 SPATS2LQ9NUQ6 558 aaKnown RBP15.55■□□□□ 0.08
PALB2-205ENST00000567003 UTP20O75691 2785 aaKnown RBP15.54■□□□□ 0.08
PALB2-205ENST00000567003 TEX33O43247 280 aa15.54■□□□□ 0.08
PALB2-205ENST00000567003 KRT3P12035 628 aa15.54■□□□□ 0.08
PALB2-205ENST00000567003 PNLIPP16233 465 aa15.54■□□□□ 0.08
PALB2-205ENST00000567003 ALDH4A1P30038 563 aa15.54■□□□□ 0.08
PALB2-205ENST00000567003 YBEYP58557 167 aaPredicted RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms