RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 VPS41P49754 854 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 SUOXP51687 545 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 GEMP55040 296 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 RPL26P61254 145 aaKnown RBP8.2□□□□□ -1.1
CDH13-208ENST00000566333 RPL6Q02878 288 aaKnown RBP8.2□□□□□ -1.1
CDH13-208ENST00000566333 CDK18Q07002 472 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 CKAP4Q07065 602 aaKnown RBP8.2□□□□□ -1.1
CDH13-208ENST00000566333 ELP6Q0PNE2 266 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 MSLNQ13421 630 aaPredicted RBP8.2□□□□□ -1.1
CDH13-208ENST00000566333 KCNJ11Q14654 390 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 SLC1A5Q15758 541 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 CNGA3Q16281 694 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 CDKN3Q16667 212 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 ZNF284Q2VY69 593 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 TMEM52BQ4KMG9 183 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 SIRPB2Q5JXA9 342 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 SYCP2LQ5T4T6 812 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 CFAP58Q5T655 872 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 KIAA0895LQ68EN5 471 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 ZC3H14Q6PJT7 736 aaKnown RBP8.2□□□□□ -1.1
CDH13-208ENST00000566333 RANBP10Q6VN20 620 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 SLC36A4Q6YBV0 504 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 USP45Q70EL2 814 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 GSTA5Q7RTV2 222 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 KDELC2Q7Z4H8 507 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 HORMAD1Q86X24 394 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 JAMLQ86YT9 394 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 KLHL7Q8IXQ5 586 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 TMEFF1Q8IYR6 380 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 GRK7Q8WTQ7 553 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 BIRC7Q96CA5 298 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 EID2BQ96D98 161 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 HSPA12BQ96MM6 686 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 PPP1R2P1Q96PQ5 205 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 KRT12Q99456 494 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 TBL1YQ9BQ87 522 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 APOL2Q9BQE5 337 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 TRIM51Q9BSJ1 452 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 PCED1AQ9H1Q7 454 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 LRRC40Q9H9A6 602 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 EBF2Q9HAK2 575 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 ETNK1Q9HBU6 452 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 EIF2B3Q9NR50 452 aaKnown RBP8.2□□□□□ -1.1
CDH13-208ENST00000566333 RAB6BQ9NRW1 208 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 FAM86C1Q9NVL1 165 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 PHTF1Q9UMS5 762 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 RPL26L1Q9UNX3 145 aaKnown RBP8.2□□□□□ -1.1
CDH13-208ENST00000566333 NCKAP1Q9Y2A7 1128 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 SPO11Q9Y5K1 396 aa8.2□□□□□ -1.1
CDH13-208ENST00000566333 ARID1BQ8NFD5 2236 aaPredicted RBP8.19□□□□□ -1.1
CDH13-208ENST00000566333 A0A1W2PQU0 124 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 TCRBV7S3A2A0A539 114 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 PRR23AA6NEV1 266 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 FAM47DPA6NHR8 397 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 LRRC72A6NJI9 287 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 METTL12A8MUP2 240 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 ANKRD66B4E2M5 251 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 TP73O15350 636 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 TTI1O43156 1089 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 RAD51CO43502 376 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 TSPAN6O43657 245 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 RNGTTO60942 597 aaKnown RBP8.19□□□□□ -1.1
CDH13-208ENST00000566333 SUN1O94901 812 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 HEXIM1O94992 359 aaKnown RBP8.19□□□□□ -1.1
CDH13-208ENST00000566333 GAS8O95995 478 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 AGTP01019 485 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 EPOP01588 193 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 KRT14P02533 472 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 FGF1P05230 155 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 C1SP09871 688 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 PIRTP0C851 137 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 HLA-DPA1P20036 260 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 IVDP26440 423 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 VIPR1P32241 457 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 HNF1BP35680 557 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 GRIA1P42261 906 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 CCR5P51681 352 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 MRPS25P82663 173 aaKnown RBP8.19□□□□□ -1.1
CDH13-208ENST00000566333 DR1Q01658 176 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 LMNB2Q03252 620 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 SFSWAPQ12872 951 aaKnown RBP8.19□□□□□ -1.1
CDH13-208ENST00000566333 GPS1Q13098 491 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 SPARCL1Q14515 664 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 SPDYCQ5MJ68 293 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 PEAR1Q5VY43 1037 aaPredicted RBP8.19□□□□□ -1.1
CDH13-208ENST00000566333 ANKRD22Q5VYY1 191 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 LRRC66Q68CR7 880 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 KIAA1161Q6NSJ0 714 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 ERAP2Q6P179 960 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 NEK5Q6P3R8 708 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 CRTC1Q6UUV9 634 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 LIPIQ6XZB0 460 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 ARMCX6Q7L4S7 300 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 LYSMD3Q7Z3D4 306 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 TTC7BQ86TV6 843 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 C11orf74Q86VG3 221 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 TTC30BQ8N4P2 665 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 DEFB119Q8N690 84 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 PDCD7Q8N8D1 485 aaKnown RBP8.19□□□□□ -1.1
CDH13-208ENST00000566333 SUMF1Q8NBK3 374 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms