RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 MDM1Q8TC05 714 aa10.78□□□□□ -0.68
UBFD1-205ENST00000566136 LRRC1Q9BTT6 524 aa10.78□□□□□ -0.68
UBFD1-205ENST00000566136 MECRQ9BV79 373 aa10.78□□□□□ -0.68
UBFD1-205ENST00000566136 WDR11Q9BZH6 1224 aa10.78□□□□□ -0.68
UBFD1-205ENST00000566136 PLEKHA4Q9H4M7 779 aa10.78□□□□□ -0.68
UBFD1-205ENST00000566136 STN1Q9H668 368 aaKnown RBP10.78□□□□□ -0.68
UBFD1-205ENST00000566136 SIX2Q9NPC8 291 aa10.78□□□□□ -0.68
UBFD1-205ENST00000566136 CYP39A1Q9NYL5 469 aa10.78□□□□□ -0.68
UBFD1-205ENST00000566136 VPS18Q9P253 973 aa10.78□□□□□ -0.68
UBFD1-205ENST00000566136 SLC8A2Q9UPR5 921 aa10.78□□□□□ -0.68
UBFD1-205ENST00000566136 CHTOPQ9Y3Y2 248 aaKnown RBP10.78□□□□□ -0.68
UBFD1-205ENST00000566136 ZNF536O15090 1300 aa10.78□□□□□ -0.68
UBFD1-205ENST00000566136 MYH11P35749 1972 aa10.78□□□□□ -0.68
UBFD1-205ENST00000566136 CLCA1A8K7I4 914 aa10.78□□□□□ -0.68
UBFD1-205ENST00000566136 PDHXO00330 501 aa10.78□□□□□ -0.68
UBFD1-205ENST00000566136 HNRNPCL1O60812 293 aaKnown RBP10.78□□□□□ -0.68
UBFD1-205ENST00000566136 LILRB5O75023 590 aa10.78□□□□□ -0.68
UBFD1-205ENST00000566136 RASSF9O75901 435 aa10.78□□□□□ -0.68
UBFD1-205ENST00000566136 SMNDC1O75940 238 aaKnown RBP eCLIP10.78□□□□□ -0.68
UBFD1-205ENST00000566136 TCP1P17987 556 aaKnown RBP10.78□□□□□ -0.68
UBFD1-205ENST00000566136 CDH8P55286 799 aa10.78□□□□□ -0.68
UBFD1-205ENST00000566136 RNASELQ05823 741 aaKnown RBP10.78□□□□□ -0.68
UBFD1-205ENST00000566136 LMAN2Q12907 356 aa10.78□□□□□ -0.68
UBFD1-205ENST00000566136 VEPH1Q14D04 833 aa10.78□□□□□ -0.68
UBFD1-205ENST00000566136 NAB2Q15742 525 aa10.78□□□□□ -0.68
UBFD1-205ENST00000566136 ZNF792Q3KQV3 632 aa10.78□□□□□ -0.68
UBFD1-205ENST00000566136 SCYL3Q8IZE3 742 aa10.78□□□□□ -0.68
UBFD1-205ENST00000566136 TRIML2Q8N7C3 387 aa10.78□□□□□ -0.68
UBFD1-205ENST00000566136 C3orf20Q8ND61 904 aa10.78□□□□□ -0.68
UBFD1-205ENST00000566136 FIZ1Q96SL8 496 aa10.78□□□□□ -0.68
UBFD1-205ENST00000566136 MXRA8Q9BRK3 442 aa10.78□□□□□ -0.68
UBFD1-205ENST00000566136 GOLPH3Q9H4A6 298 aa10.78□□□□□ -0.68
UBFD1-205ENST00000566136 RAVER2Q9HCJ3 691 aaKnown RBP10.78□□□□□ -0.68
UBFD1-205ENST00000566136 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.78□□□□□ -0.68
UBFD1-205ENST00000566136 MORF4L1Q9UBU8 362 aa10.78□□□□□ -0.68
UBFD1-205ENST00000566136 TEX264Q9Y6I9 313 aa10.78□□□□□ -0.68
UBFD1-205ENST00000566136 ZHX2Q9Y6X8 837 aa10.78□□□□□ -0.68
UBFD1-205ENST00000566136 FRMPD4Q14CM0 1322 aa10.78□□□□□ -0.68
UBFD1-205ENST00000566136 ZSWIM8A7E2V4 1837 aa10.78□□□□□ -0.68
UBFD1-205ENST00000566136 A0A0A6YYC8 382 aaPredicted RBP10.77□□□□□ -0.69
UBFD1-205ENST00000566136 GOLGA6L7A0A1B0GV03 622 aa10.77□□□□□ -0.69
UBFD1-205ENST00000566136 SHISA3A0PJX4 238 aa10.77□□□□□ -0.69
UBFD1-205ENST00000566136 TARSL2A2RTX5 802 aaKnown RBP10.77□□□□□ -0.69
UBFD1-205ENST00000566136 ARHGEF35A5YM69 484 aa10.77□□□□□ -0.69
UBFD1-205ENST00000566136 I3L1I5 382 aaPredicted RBP10.77□□□□□ -0.69
UBFD1-205ENST00000566136 SLC16A3O15427 465 aaKnown RBP10.77□□□□□ -0.69
UBFD1-205ENST00000566136 GCATO75600 419 aa10.77□□□□□ -0.69
UBFD1-205ENST00000566136 ASNSP08243 561 aa10.77□□□□□ -0.69
UBFD1-205ENST00000566136 TRIM49P0CI25 452 aa10.77□□□□□ -0.69
UBFD1-205ENST00000566136 TRIM49CP0CI26 452 aa10.77□□□□□ -0.69
UBFD1-205ENST00000566136 GNAT1P11488 350 aa10.77□□□□□ -0.69
UBFD1-205ENST00000566136 MAGEA8P43361 318 aa10.77□□□□□ -0.69
UBFD1-205ENST00000566136 TJAP1Q5JTD0 557 aa10.77□□□□□ -0.69
UBFD1-205ENST00000566136 ZDHHC24Q6UX98 284 aa10.77□□□□□ -0.69
UBFD1-205ENST00000566136 GAREM2Q75VX8 874 aa10.77□□□□□ -0.69
UBFD1-205ENST00000566136 KCTD20Q7Z5Y7 419 aa10.77□□□□□ -0.69
UBFD1-205ENST00000566136 HOOK3Q86VS8 718 aa10.77□□□□□ -0.69
UBFD1-205ENST00000566136 HDDC3Q8N4P3 179 aa10.77□□□□□ -0.69
UBFD1-205ENST00000566136 DCBLD2Q96PD2 775 aa10.77□□□□□ -0.69
UBFD1-205ENST00000566136 NACC1Q96RE7 527 aa10.77□□□□□ -0.69
UBFD1-205ENST00000566136 NR1H4Q96RI1 486 aaPredicted RBP10.77□□□□□ -0.69
UBFD1-205ENST00000566136 MRPL46Q9H2W6 279 aaKnown RBP10.77□□□□□ -0.69
UBFD1-205ENST00000566136 SUCLA2Q9P2R7 463 aaPredicted RBP10.77□□□□□ -0.69
UBFD1-205ENST00000566136 SCOCQ9UIL1 159 aa10.77□□□□□ -0.69
UBFD1-205ENST00000566136 J3QL48 77 aa10.77□□□□□ -0.69
UBFD1-205ENST00000566136 GSTA4O15217 222 aa10.77□□□□□ -0.69
UBFD1-205ENST00000566136 EIF3DO15371 548 aaKnown RBP eCLIP10.77□□□□□ -0.69
UBFD1-205ENST00000566136 ICAM1P05362 532 aa10.77□□□□□ -0.69
UBFD1-205ENST00000566136 ALDH4A1P30038 563 aa10.77□□□□□ -0.69
UBFD1-205ENST00000566136 RDXP35241 583 aaKnown RBP10.77□□□□□ -0.69
UBFD1-205ENST00000566136 AP3M2P53677 418 aa10.77□□□□□ -0.69
UBFD1-205ENST00000566136 GPS2Q13227 327 aa10.77□□□□□ -0.69
UBFD1-205ENST00000566136 FRG1Q14331 258 aaKnown RBP10.77□□□□□ -0.69
UBFD1-205ENST00000566136 ZNF720Q7Z2F6 126 aa10.77□□□□□ -0.69
UBFD1-205ENST00000566136 MIER3Q7Z3K6 550 aa10.77□□□□□ -0.69
UBFD1-205ENST00000566136 MIB1Q86YT6 1006 aa10.77□□□□□ -0.69
UBFD1-205ENST00000566136 RNF10Q8N5U6 811 aaKnown RBP10.77□□□□□ -0.69
UBFD1-205ENST00000566136 SLC4A11Q8NBS3 891 aa10.77□□□□□ -0.69
UBFD1-205ENST00000566136 HIPK4Q8NE63 616 aa10.77□□□□□ -0.69
UBFD1-205ENST00000566136 OR52M1Q8NGK5 317 aa10.77□□□□□ -0.69
UBFD1-205ENST00000566136 FUZQ9BT04 418 aa10.77□□□□□ -0.69
UBFD1-205ENST00000566136 ZNF552Q9H707 407 aaPredicted RBP10.77□□□□□ -0.69
UBFD1-205ENST00000566136 SEMA4BQ9NPR2 832 aaPredicted RBP10.77□□□□□ -0.69
UBFD1-205ENST00000566136 KCNH7Q9NS40 1196 aa10.77□□□□□ -0.69
UBFD1-205ENST00000566136 GRID2IPA4D2P6 1211 aa10.76□□□□□ -0.69
UBFD1-205ENST00000566136 TMEM150BA6NC51 233 aa10.76□□□□□ -0.69
UBFD1-205ENST00000566136 RNF223E7ERA6 249 aa10.76□□□□□ -0.69
UBFD1-205ENST00000566136 RRP8O43159 456 aaKnown RBP10.76□□□□□ -0.69
UBFD1-205ENST00000566136 CSF2RAP15509 400 aa10.76□□□□□ -0.69
UBFD1-205ENST00000566136 PSMC2P35998 433 aaKnown RBP10.76□□□□□ -0.69
UBFD1-205ENST00000566136 DOC2AQ14183 400 aa10.76□□□□□ -0.69
UBFD1-205ENST00000566136 CLPPQ16740 277 aaPredicted RBP10.76□□□□□ -0.69
UBFD1-205ENST00000566136 PCGF3Q3KNV8 242 aa10.76□□□□□ -0.69
UBFD1-205ENST00000566136 GPAT2Q6NUI2 795 aa10.76□□□□□ -0.69
UBFD1-205ENST00000566136 C17orf99Q6UX52 265 aa10.76□□□□□ -0.69
UBFD1-205ENST00000566136 CCNI2Q6ZMN8 369 aaPredicted RBP10.76□□□□□ -0.69
UBFD1-205ENST00000566136 HID1Q8IV36 788 aa10.76□□□□□ -0.69
UBFD1-205ENST00000566136 DAW1Q8N136 415 aa10.76□□□□□ -0.69
UBFD1-205ENST00000566136 MMGT1Q8N4V1 131 aa10.76□□□□□ -0.69
UBFD1-205ENST00000566136 MRPL43Q8N983 215 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms