RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 LPCAT1Q8NF37 534 aa12.99□□□□□ -0.33
SPG7-209ENST00000564047 RPLP0P6Q8NHW5 317 aa12.99□□□□□ -0.33
SPG7-209ENST00000564047 GRIN3AQ8TCU5 1115 aa12.99□□□□□ -0.33
SPG7-209ENST00000564047 PDCD6IPQ8WUM4 868 aaKnown RBP12.99□□□□□ -0.33
SPG7-209ENST00000564047 PIH1D2Q8WWB5 315 aa12.99□□□□□ -0.33
SPG7-209ENST00000564047 KLHL32Q96NJ5 620 aa12.99□□□□□ -0.33
SPG7-209ENST00000564047 OSBPL6Q9BZF3 934 aa12.99□□□□□ -0.33
SPG7-209ENST00000564047 RSPH9Q9H1X1 276 aaPredicted RBP12.99□□□□□ -0.33
SPG7-209ENST00000564047 SEMA4AQ9H3S1 761 aa12.99□□□□□ -0.33
SPG7-209ENST00000564047 LMAN1LQ9HAT1 526 aa12.99□□□□□ -0.33
SPG7-209ENST00000564047 BFARQ9NZS9 450 aa12.99□□□□□ -0.33
SPG7-209ENST00000564047 DKK3Q9UBP4 350 aa12.99□□□□□ -0.33
SPG7-209ENST00000564047 MMP17Q9ULZ9 603 aa12.99□□□□□ -0.33
SPG7-209ENST00000564047 MIA3Q5JRA6 1907 aa12.99□□□□□ -0.33
SPG7-209ENST00000564047 A0A1W2PQF6 199 aa12.98□□□□□ -0.33
SPG7-209ENST00000564047 SDR42E2A6NKP2 422 aa12.98□□□□□ -0.33
SPG7-209ENST00000564047 FAM170BA6NMN3 283 aa12.98□□□□□ -0.33
SPG7-209ENST00000564047 ANKRD66B4E2M5 251 aa12.98□□□□□ -0.33
SPG7-209ENST00000564047 C1QTNF3-AMACRE9PGA6 284 aa12.98□□□□□ -0.33
SPG7-209ENST00000564047 RNASEH1O60930 286 aaKnown RBP12.98□□□□□ -0.33
SPG7-209ENST00000564047 AVILO75366 819 aa12.98□□□□□ -0.33
SPG7-209ENST00000564047 CPP00450 1065 aa12.98□□□□□ -0.33
SPG7-209ENST00000564047 C7P10643 843 aa12.98□□□□□ -0.33
SPG7-209ENST00000564047 EPHB1P54762 984 aa12.98□□□□□ -0.33
SPG7-209ENST00000564047 SESN2P58004 480 aaPredicted RBP12.98□□□□□ -0.33
SPG7-209ENST00000564047 DHX9Q08211 1270 aaKnown RBP12.98□□□□□ -0.33
SPG7-209ENST00000564047 MSLNQ13421 630 aaPredicted RBP12.98□□□□□ -0.33
SPG7-209ENST00000564047 FZD5Q13467 585 aa12.98□□□□□ -0.33
SPG7-209ENST00000564047 UBXN2BQ14CS0 331 aa12.98□□□□□ -0.33
SPG7-209ENST00000564047 QPCTQ16769 361 aa12.98□□□□□ -0.33
SPG7-209ENST00000564047 BBS9Q3SYG4 887 aa12.98□□□□□ -0.33
SPG7-209ENST00000564047 MSS51Q4VC12 460 aa12.98□□□□□ -0.33
SPG7-209ENST00000564047 FAM46CQ5VWP2 391 aa12.98□□□□□ -0.33
SPG7-209ENST00000564047 CCDC25Q86WR0 208 aa12.98□□□□□ -0.33
SPG7-209ENST00000564047 NDUFAF2Q8N183 169 aa12.98□□□□□ -0.33
SPG7-209ENST00000564047 MREGQ8N565 214 aa12.98□□□□□ -0.33
SPG7-209ENST00000564047 PAF1Q8N7H5 531 aa12.98□□□□□ -0.33
SPG7-209ENST00000564047 FLCNQ8NFG4 579 aa12.98□□□□□ -0.33
SPG7-209ENST00000564047 OR2T3Q8NH03 318 aa12.98□□□□□ -0.33
SPG7-209ENST00000564047 PIP4K2CQ8TBX8 421 aa12.98□□□□□ -0.33
SPG7-209ENST00000564047 SIGLEC10Q96LC7 697 aa12.98□□□□□ -0.33
SPG7-209ENST00000564047 IL22Q9GZX6 179 aa12.98□□□□□ -0.33
SPG7-209ENST00000564047 TBC1D17Q9HA65 648 aa12.98□□□□□ -0.33
SPG7-209ENST00000564047 CD248Q9HCU0 757 aa12.98□□□□□ -0.33
SPG7-209ENST00000564047 SAYSD1Q9NPB0 183 aa12.98□□□□□ -0.33
SPG7-209ENST00000564047 PHTF1Q9UMS5 762 aa12.98□□□□□ -0.33
SPG7-209ENST00000564047 PPIL1Q9Y3C6 166 aa12.98□□□□□ -0.33
SPG7-209ENST00000564047 A0A0J9YYE9 177 aa12.97□□□□□ -0.33
SPG7-209ENST00000564047 MAGEB16A2A368 324 aa12.97□□□□□ -0.33
SPG7-209ENST00000564047 KPNA3O00505 521 aaPredicted RBP12.97□□□□□ -0.33
SPG7-209ENST00000564047 ATG13O75143 517 aa12.97□□□□□ -0.33
SPG7-209ENST00000564047 IL1BP01584 269 aa12.97□□□□□ -0.33
SPG7-209ENST00000564047 TRBC1P01850 177 aa12.97□□□□□ -0.33
SPG7-209ENST00000564047 LMNAP02545 664 aaKnown RBP12.97□□□□□ -0.33
SPG7-209ENST00000564047 TPH1P17752 444 aa12.97□□□□□ -0.33
SPG7-209ENST00000564047 ITGB7P26010 798 aa12.97□□□□□ -0.33
SPG7-209ENST00000564047 MGAT1P26572 445 aa12.97□□□□□ -0.33
SPG7-209ENST00000564047 SLC8A1P32418 973 aa12.97□□□□□ -0.33
SPG7-209ENST00000564047 MAGEA4P43358 317 aa12.97□□□□□ -0.33
SPG7-209ENST00000564047 MTM1Q13496 603 aa12.97□□□□□ -0.33
SPG7-209ENST00000564047 ANGPT1Q15389 498 aa12.97□□□□□ -0.33
SPG7-209ENST00000564047 CCDC38Q502W7 563 aa12.97□□□□□ -0.33
SPG7-209ENST00000564047 PCID2Q5JVF3 399 aa12.97□□□□□ -0.33
SPG7-209ENST00000564047 CERCAMQ5T4B2 595 aa12.97□□□□□ -0.33
SPG7-209ENST00000564047 ALS2CLQ60I27 953 aa12.97□□□□□ -0.33
SPG7-209ENST00000564047 ZNF776Q68DI1 518 aaPredicted RBP12.97□□□□□ -0.33
SPG7-209ENST00000564047 TMC3Q7Z5M5 1100 aa12.97□□□□□ -0.33
SPG7-209ENST00000564047 ZSWIM9Q86XI8 627 aa12.97□□□□□ -0.33
SPG7-209ENST00000564047 CCNJLQ8IV13 435 aa12.97□□□□□ -0.33
SPG7-209ENST00000564047 KIAA2013Q8IYS2 634 aa12.97□□□□□ -0.33
SPG7-209ENST00000564047 ZBED8Q8IZ13 594 aa12.97□□□□□ -0.33
SPG7-209ENST00000564047 AGGF1Q8N302 714 aaeCLIP12.97□□□□□ -0.33
SPG7-209ENST00000564047 PTCD2Q8WV60 388 aaKnown RBP12.97□□□□□ -0.33
SPG7-209ENST00000564047 PPP1R16AQ96I34 528 aa12.97□□□□□ -0.33
SPG7-209ENST00000564047 RANBP9Q96S59 729 aa12.97□□□□□ -0.33
SPG7-209ENST00000564047 SRPK1Q96SB4 655 aaKnown RBP12.97□□□□□ -0.33
SPG7-209ENST00000564047 EBNA1BP2Q99848 306 aaKnown RBP12.97□□□□□ -0.33
SPG7-209ENST00000564047 NAT9Q9BTE0 207 aa12.97□□□□□ -0.33
SPG7-209ENST00000564047 TXLNGYQ9BZA5 131 aa12.97□□□□□ -0.33
SPG7-209ENST00000564047 FOXQ1Q9C009 403 aa12.97□□□□□ -0.33
SPG7-209ENST00000564047 PIH1D1Q9NWS0 290 aaKnown RBP12.97□□□□□ -0.33
SPG7-209ENST00000564047 HACD3Q9P035 362 aa12.97□□□□□ -0.33
SPG7-209ENST00000564047 SARDHQ9UL12 918 aa12.97□□□□□ -0.33
SPG7-209ENST00000564047 MTF2Q9Y483 593 aaPredicted RBP12.97□□□□□ -0.33
SPG7-209ENST00000564047 TEX264Q9Y6I9 313 aa12.97□□□□□ -0.33
SPG7-209ENST00000564047 OTOGLQ3ZCN5 2332 aa12.97□□□□□ -0.33
SPG7-209ENST00000564047 C16orf96A6NNT2 1141 aa12.96□□□□□ -0.33
SPG7-209ENST00000564047 POLR3GO15318 223 aaPredicted RBP12.96□□□□□ -0.33
SPG7-209ENST00000564047 ADH1BP00325 375 aa12.96□□□□□ -0.33
SPG7-209ENST00000564047 C5AR1P21730 350 aa12.96□□□□□ -0.33
SPG7-209ENST00000564047 ADRA1DP25100 572 aa12.96□□□□□ -0.33
SPG7-209ENST00000564047 NFKBIAP25963 317 aa12.96□□□□□ -0.33
SPG7-209ENST00000564047 ELK3P41970 407 aa12.96□□□□□ -0.33
SPG7-209ENST00000564047 SUOXP51687 545 aa12.96□□□□□ -0.33
SPG7-209ENST00000564047 COPAP53621 1224 aa12.96□□□□□ -0.33
SPG7-209ENST00000564047 SATB1Q01826 763 aa12.96□□□□□ -0.33
SPG7-209ENST00000564047 LAMB3Q13751 1172 aa12.96□□□□□ -0.33
SPG7-209ENST00000564047 CST6Q15828 149 aa12.96□□□□□ -0.33
SPG7-209ENST00000564047 CRY1Q16526 586 aa12.96□□□□□ -0.33
SPG7-209ENST00000564047 UGP2Q16851 508 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms