RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 YWHAGP61981 247 aaKnown RBP eCLIP4.78□□□□□ -1.64
CDR2-203ENST00000563573 RPL7AP62424 266 aaKnown RBP4.78□□□□□ -1.64
CDR2-203ENST00000563573 SPIDRQ14159 915 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 PTPROQ16827 1216 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 PABPC1LQ4VXU2 614 aaKnown RBP4.78□□□□□ -1.64
CDR2-203ENST00000563573 BOLA3Q53S33 107 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 RABL3Q5HYI8 236 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 CCDC181Q5TID7 509 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 PLPP4Q5VZY2 271 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 C11orf63Q6NUN7 778 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 Q6ZRM9 215 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 SLC26A9Q7LBE3 791 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 KANSL1Q7Z3B3 1105 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 SLFN11Q7Z7L1 901 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 TADA2BQ86TJ2 420 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 NT5DC3Q86UY8 548 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 RHOT1Q8IXI2 618 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 TCEAL8Q8IYN2 117 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 DEFB106AQ8N104 65 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 ATAD1Q8NBU5 361 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 STKLD1Q8NE28 680 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 MDGA1Q8NFP4 955 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 OLIG1Q8TAK6 271 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 RNF139Q8WU17 664 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 HDAC7Q8WUI4 952 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 SLC25A43Q8WUT9 341 aaPredicted RBP4.78□□□□□ -1.64
CDR2-203ENST00000563573 RXFP2Q8WXD0 754 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 ATRIPQ8WXE1 791 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 AUTS2Q8WXX7 1259 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 PPP2R3CQ969Q6 453 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 ZG16BQ96DA0 208 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 MFSD3Q96ES6 412 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 ZNF512Q96ME7 567 aaPredicted RBP4.78□□□□□ -1.64
CDR2-203ENST00000563573 MCEEQ96PE7 176 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 KLHL5Q96PQ7 755 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 SLITRK1Q96PX8 696 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 NAP1L3Q99457 506 aaPredicted RBP4.78□□□□□ -1.64
CDR2-203ENST00000563573 MNTQ99583 582 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 SEPT5Q99719 369 aaPredicted RBP4.78□□□□□ -1.64
CDR2-203ENST00000563573 ORAI3Q9BRQ5 295 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 CNPY3Q9BT09 278 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 DDX23Q9BUQ8 820 aaKnown RBP4.78□□□□□ -1.64
CDR2-203ENST00000563573 VN1R3Q9BXE9 311 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 RHOBTB2Q9BYZ6 727 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 ULBP1Q9BZM6 244 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 PLEKHA4Q9H4M7 779 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 TLR8Q9NR97 1041 aaKnown RBP4.78□□□□□ -1.64
CDR2-203ENST00000563573 DDX56Q9NY93 547 aaKnown RBP4.78□□□□□ -1.64
CDR2-203ENST00000563573 TRPM5Q9NZQ8 1165 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 RNF14Q9UBS8 474 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 CHORDC1Q9UHD1 332 aaPredicted RBP4.78□□□□□ -1.64
CDR2-203ENST00000563573 SLC12A6Q9UHW9 1150 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 STAP1Q9ULZ2 295 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 MAGED2Q9UNF1 606 aaPredicted RBP4.78□□□□□ -1.64
CDR2-203ENST00000563573 COG5Q9UP83 839 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 SCML2Q9UQR0 700 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 HYOU1Q9Y4L1 999 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 PCDHA3Q9Y5H8 950 aa4.78□□□□□ -1.64
CDR2-203ENST00000563573 PLXNA3P51805 1871 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 CEP290O15078 2479 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 TCRBV5S1A1TA0A578 114 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 C2CD4BA6NLJ0 364 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 HHLA1C9JL84 531 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 CES2O00748 559 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 GRM6O15303 877 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 ADAM12O43184 909 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 TGM5O43548 720 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 PRPSAP2O60256 369 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 ZRANB2O95218 330 aaKnown RBP eCLIP4.77□□□□□ -1.65
CDR2-203ENST00000563573 FGF19O95750 216 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 FTCDO95954 541 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 ATP1A1P05023 1023 aaKnown RBP4.77□□□□□ -1.65
CDR2-203ENST00000563573 KRT7P08729 469 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 LINC00271P0C7V0 271 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 JMJD7P0C870 316 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 PTPN2P17706 415 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 PTX3P26022 381 aaPredicted RBP4.77□□□□□ -1.65
CDR2-203ENST00000563573 CTNNA2P26232 953 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 PCK1P35558 622 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 PTPN9P43378 593 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 SULT1E1P49888 294 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 KPNA1P52294 538 aaPredicted RBP4.77□□□□□ -1.65
CDR2-203ENST00000563573 SLC5A3P53794 718 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 CACNA2D1P54289 1103 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 GYS2P54840 703 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 RWDD2BP57060 319 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 TUBB4BP68371 445 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 DEUP1Q05D60 604 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 TWF1Q12792 350 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 MYBPC3Q14896 1274 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 CDO1Q16878 200 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 ARL13BQ3SXY8 428 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 SLC25A52Q3SY17 297 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 CCDC14Q49A88 953 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 DCAF6Q58WW2 860 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 PPM1LQ5SGD2 360 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 ERMARDQ5T6L9 678 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 SEL1L2Q5TEA6 688 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 BSPRYQ5W0U4 402 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 PAPD7Q5XG87 772 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms