RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 IFT80Q9P2H3 777 aaPredicted RBP14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 MTRRQ9UBK8 725 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 GJD2Q9UKL4 321 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 AP4E1Q9UPM8 1137 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 PCDHGA7Q9Y5G6 932 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 H7C0C1 242 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 LRCH4O75427 683 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 CDH1P12830 882 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 CNTFP26441 200 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 ATP5OP48047 213 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 KRT6CP48668 564 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 HLCSP50747 726 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 CHRNEQ04844 493 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 AQP6Q13520 282 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 CDO1Q16878 200 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 GRAMD2AQ8IUY3 354 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 PARP8Q8N3A8 854 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 TTC30BQ8N4P2 665 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 SNX31Q8N9S9 440 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 ZUFSPQ96AP4 578 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 XPNPEP3Q9NQH7 507 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 PKD2L2Q9NZM6 624 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 WARS2Q9UGM6 360 aaKnown RBP14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 PRORSD1PA6NEY8 169 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 SNPHO15079 494 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 TREHO43280 583 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 CHRNGP07510 517 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 MBL2P11226 248 aaPredicted RBP14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 TFE3P19532 575 aaPredicted RBP14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 IFNA8P32881 189 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 POU5F1BQ06416 359 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 TRIM32Q13049 653 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 STILQ15468 1287 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 TMTC4Q5T4D3 741 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 PRR23BQ6ZRT6 265 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 KIAA0408Q6ZU52 694 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 ERMP1Q7Z2K6 904 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 ZNF467Q7Z7K2 595 aaPredicted RBP14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 ACOT1Q86TX2 421 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 RALGPS2Q86X27 583 aaPredicted RBP14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 XYLT1Q86Y38 959 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 PACRGLQ8N7B6 248 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 KCTD6Q8NC69 237 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 SEPT8Q92599 483 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 NRBF2Q96F24 287 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 CDK5RAP1Q96SZ6 601 aaKnown RBP14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 CLSTN3Q9BQT9 956 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 MRPL45Q9BRJ2 306 aaKnown RBP14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 ZNF518BQ9C0D4 1074 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 GOLGA2P5Q9HBQ8 144 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 HEATR9A2RTY3 570 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 KCNU1A8MYU2 1149 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 CCRL2O00421 344 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 SCO2O43819 266 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 IDH3BO43837 385 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 TPST1O60507 370 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 BCAS1O75363 584 aaPredicted RBP14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 TPPPO94811 219 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 UGT2B4P06133 528 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 CDH5P33151 784 aaPredicted RBP14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 GPD2P43304 727 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 SLC25A11Q02978 314 aaKnown RBP14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 HERC3Q15034 1050 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 CEP78Q5JTW2 689 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 FAM102AQ5T9C2 384 aaPredicted RBP14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 SEL1L3Q68CR1 1132 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 TLK2Q86UE8 772 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 ARMC8Q8IUR7 673 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 TOP1MTQ969P6 601 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 TP53INP1Q96A56 240 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 EBNA1BP2Q99848 306 aaKnown RBP14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 RNF39Q9H2S5 420 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 TSPAN16Q9UKR8 245 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 AURKCQ9UQB9 309 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 SLC45A1Q9Y2W3 748 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 FAM172BPA6NC97 362 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 HDAC3O15379 428 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 MED7O43513 233 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 SYNCRIPO60506 623 aaKnown RBP14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 TYK2P29597 1187 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 TUBA1BP68363 451 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 ECT2LQ008S8 904 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 SLC13A2Q13183 592 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 INTS11Q5TA45 600 aaKnown RBP14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 LRRC8EQ6NSJ5 796 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 CRTC3Q6UUV7 619 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 TUBA1AQ71U36 451 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 CNTD1Q8N815 330 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 CMASQ8NFW8 434 aaPredicted RBP14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 S100ZQ8WXG8 99 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 ILKAPQ9H0C8 392 aaPredicted RBP14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 NMRK2Q9NPI5 230 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 NME7Q9Y5B8 376 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 ANGPTL3Q9Y5C1 460 aa14.09□□□□□ -0.15
GTF3C1-203ENST00000562609 SLC22A2O15244 555 aa14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 KCNN4O15554 427 aa14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 TIMM44O43615 452 aa14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 GPR32O75388 356 aa14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 ALX3O95076 343 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms