RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 CXADRP78310 365 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 GABREP78334 506 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 SLC20A2Q08357 652 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 CDKN3Q16667 212 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 ISXQ2M1V0 245 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 C15orf59Q2T9L4 293 aaPredicted RBP5.88□□□□□ -1.47
USP3-215ENST00000559771 DEFB133Q30KQ1 61 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 DPCR1Q3MIW9 517 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 CCDC14Q49A88 953 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 VWA3BQ502W6 1294 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 HSP90AA4PQ58FG1 418 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 LRRC73Q5JTD7 316 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 KCTD16Q68DU8 428 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 KIAA1161Q6NSJ0 714 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 RETSATQ6NUM9 610 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 ZCCHC8Q6NZY4 707 aaKnown RBP5.88□□□□□ -1.47
USP3-215ENST00000559771 LRRC31Q6UY01 552 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 LEKR1Q6ZMV7 388 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 ARCQ7LC44 396 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 PTAR1Q7Z6K3 402 aaPredicted RBP5.88□□□□□ -1.47
USP3-215ENST00000559771 PARGQ86W56 976 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 DCP2Q8IU60 420 aaKnown RBP5.88□□□□□ -1.47
USP3-215ENST00000559771 CREBRFQ8IUR6 639 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 DRC7Q8IY82 874 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 CCDC185Q8N715 623 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 MLKLQ8NB16 471 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 NETO2Q8NC67 525 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 ZNF248Q8NDW4 579 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 JOSD2Q8TAC2 188 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 IFI44Q8TCB0 444 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 ASB12Q8WXK4 309 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 TTC9Q92623 222 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 CENPIQ92674 756 aaPredicted RBP5.88□□□□□ -1.47
USP3-215ENST00000559771 ARHGEF2Q92974 986 aaKnown RBP5.88□□□□□ -1.47
USP3-215ENST00000559771 ISG20Q96AZ6 181 aaKnown RBP5.88□□□□□ -1.47
USP3-215ENST00000559771 ATXN7L3BQ96GX2 97 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 NAF1Q96HR8 494 aaKnown RBP5.88□□□□□ -1.47
USP3-215ENST00000559771 CCDC114Q96M63 670 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 ZNF578Q96N58 590 aaPredicted RBP5.88□□□□□ -1.47
USP3-215ENST00000559771 SLC46A1Q96NT5 459 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 PCDHB18PQ96TA0 734 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 TUBGCP2Q9BSJ2 902 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 FUCA2Q9BTY2 467 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 SPON2Q9BUD6 331 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 BOCQ9BWV1 1114 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 TM6SF2Q9BZW4 377 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 CLPBQ9H078 707 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 MRPL18Q9H0U6 180 aaKnown RBP5.88□□□□□ -1.47
USP3-215ENST00000559771 NUP62CLQ9H1M0 184 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 GANQ9H2C0 597 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 SYNCQ9H7C4 482 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 POLR1BQ9H9Y6 1135 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 ATP13A1Q9HD20 1204 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 MBNL1Q9NR56 388 aaKnown RBP5.88□□□□□ -1.47
USP3-215ENST00000559771 METTL5Q9NRN9 209 aaKnown RBP5.88□□□□□ -1.47
USP3-215ENST00000559771 HECAQ9UBI9 543 aaPredicted RBP5.88□□□□□ -1.47
USP3-215ENST00000559771 STAP1Q9ULZ2 295 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 SATB2Q9UPW6 733 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 ENTPD2Q9Y5L3 495 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 CSNK1G3Q9Y6M4 447 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 RP1P56715 2156 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 BOD1L1Q8NFC6 3051 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 ANKRD36A6QL64 1941 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 TCRBV5S1A1TA0A578 114 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 C2CD4BA6NLJ0 364 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 C16orf96A6NNT2 1141 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 CDRT15L2A8MXV6 281 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 GOLGA6L6A8MZA4 724 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 TMEM229AB2RXF0 380 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 F8VZ95 297 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 TPP1O14773 563 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 INSIG1O15503 277 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 AQP9O43315 295 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 TSPAN6O43657 245 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 LRIG2O94898 1065 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 LSM8O95777 96 aaKnown RBP5.87□□□□□ -1.47
USP3-215ENST00000559771 GSRP00390 522 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 UNGP13051 313 aaPredicted RBP5.87□□□□□ -1.47
USP3-215ENST00000559771 UCHL3P15374 230 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 MMP8P22894 467 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 RABIFP47224 123 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 DNA2P51530 1060 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 HDAC4P56524 1084 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 JAM2P57087 298 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 SNX16P57768 344 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 BPIFB4P59827 614 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 ERVPABLB-1P60509 514 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 ATP11AP98196 1134 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 FMO1Q01740 532 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 CFHR1Q03591 330 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 CCDC15Q0P6D6 951 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 C1orf61Q13536 156 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 RAPGEF1Q13905 1077 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 PDE1CQ14123 709 aaPredicted RBP5.87□□□□□ -1.47
USP3-215ENST00000559771 ZNF805Q5CZA5 627 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 ATXN7L2Q5T6C5 722 aaPredicted RBP5.87□□□□□ -1.47
USP3-215ENST00000559771 ACBD5Q5T8D3 534 aaPredicted RBP5.87□□□□□ -1.47
USP3-215ENST00000559771 NAA35Q5VZE5 725 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 CRTC1Q6UUV9 634 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 EFL1Q7Z2Z2 1120 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms