RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.53■□□□□ 0.08
AP4E1-202ENST00000558439 DNAJC1Q96KC8 554 aaKnown RBP15.53■□□□□ 0.08
AP4E1-202ENST00000558439 KCTD3Q9Y597 815 aa15.53■□□□□ 0.08
AP4E1-202ENST00000558439 SNX5Q9Y5X3 404 aa15.53■□□□□ 0.08
AP4E1-202ENST00000558439 J3KR12 359 aa15.53■□□□□ 0.08
AP4E1-202ENST00000558439 IRAK2O43187 625 aa15.53■□□□□ 0.08
AP4E1-202ENST00000558439 COL6A2P12110 1019 aa15.53■□□□□ 0.08
AP4E1-202ENST00000558439 ATP6V1B2P21281 511 aa15.53■□□□□ 0.08
AP4E1-202ENST00000558439 CDH18Q13634 790 aa15.53■□□□□ 0.08
AP4E1-202ENST00000558439 GPR141Q7Z602 305 aa15.53■□□□□ 0.08
AP4E1-202ENST00000558439 CLVS1Q8IUQ0 354 aaPredicted RBP15.53■□□□□ 0.08
AP4E1-202ENST00000558439 CLYBLQ8N0X4 340 aa15.53■□□□□ 0.08
AP4E1-202ENST00000558439 ACVR1CQ8NER5 493 aa15.53■□□□□ 0.08
AP4E1-202ENST00000558439 LRTOMTQ8WZ04 291 aa15.53■□□□□ 0.08
AP4E1-202ENST00000558439 IRAK4Q9NWZ3 460 aa15.53■□□□□ 0.08
AP4E1-202ENST00000558439 AZIN1O14977 448 aa15.52■□□□□ 0.08
AP4E1-202ENST00000558439 SLC2A4P14672 509 aa15.52■□□□□ 0.08
AP4E1-202ENST00000558439 FCGRTP55899 365 aa15.52■□□□□ 0.08
AP4E1-202ENST00000558439 ZIK1Q3SY52 487 aaPredicted RBP15.52■□□□□ 0.08
AP4E1-202ENST00000558439 SMG8Q8ND04 991 aaKnown RBP15.52■□□□□ 0.08
AP4E1-202ENST00000558439 FAM162AQ96A26 154 aa15.52■□□□□ 0.08
AP4E1-202ENST00000558439 GPR22Q99680 433 aa15.52■□□□□ 0.08
AP4E1-202ENST00000558439 MIOSQ9NXC5 875 aa15.52■□□□□ 0.08
AP4E1-202ENST00000558439 UBA2Q9UBT2 640 aaPredicted RBP15.52■□□□□ 0.08
AP4E1-202ENST00000558439 ADAMTS6Q9UKP5 1117 aa15.52■□□□□ 0.08
AP4E1-202ENST00000558439 EMCNQ9ULC0 261 aa15.52■□□□□ 0.08
AP4E1-202ENST00000558439 MYRFQ9Y2G1 1151 aa15.52■□□□□ 0.08
AP4E1-202ENST00000558439 A0A0J9YYE9 177 aa15.52■□□□□ 0.08
AP4E1-202ENST00000558439 CLASP2O75122 1294 aaKnown RBP15.52■□□□□ 0.08
AP4E1-202ENST00000558439 RGS4P49798 205 aa15.52■□□□□ 0.08
AP4E1-202ENST00000558439 RHOAP61586 193 aa15.52■□□□□ 0.08
AP4E1-202ENST00000558439 GALNT2Q10471 571 aa15.52■□□□□ 0.08
AP4E1-202ENST00000558439 DDX39BQ13838 428 aaKnown RBP15.52■□□□□ 0.08
AP4E1-202ENST00000558439 ANKRD23Q86SG2 305 aa15.52■□□□□ 0.08
AP4E1-202ENST00000558439 PIM3Q86V86 326 aa15.52■□□□□ 0.08
AP4E1-202ENST00000558439 TSPAN14Q8NG11 270 aa15.52■□□□□ 0.08
AP4E1-202ENST00000558439 STAG3L4Q8TBR4 150 aa15.52■□□□□ 0.08
AP4E1-202ENST00000558439 MAGEE2Q8TD90 523 aaPredicted RBP15.52■□□□□ 0.08
AP4E1-202ENST00000558439 C1orf21Q9H246 121 aa15.52■□□□□ 0.08
AP4E1-202ENST00000558439 CCDC154A6NI56 674 aa15.52■□□□□ 0.07
AP4E1-202ENST00000558439 MYO1GB0I1T2 1018 aa15.52■□□□□ 0.07
AP4E1-202ENST00000558439 MATN2O00339 956 aa15.52■□□□□ 0.07
AP4E1-202ENST00000558439 CCNT2O60583 730 aaKnown RBP15.52■□□□□ 0.07
AP4E1-202ENST00000558439 PCNAP12004 261 aa15.52■□□□□ 0.07
AP4E1-202ENST00000558439 NEDD8Q15843 81 aa15.52■□□□□ 0.07
AP4E1-202ENST00000558439 SPRYD7Q5W111 196 aa15.52■□□□□ 0.07
AP4E1-202ENST00000558439 FAM45BPQ6NSW5 357 aa15.52■□□□□ 0.07
AP4E1-202ENST00000558439 SPPL2CQ8IUH8 684 aa15.52■□□□□ 0.07
AP4E1-202ENST00000558439 FAM45AQ8TCE6 357 aa15.52■□□□□ 0.07
AP4E1-202ENST00000558439 TM6SF2Q9BZW4 377 aa15.52■□□□□ 0.07
AP4E1-202ENST00000558439 TLE6Q9H808 572 aa15.52■□□□□ 0.07
AP4E1-202ENST00000558439 GIMAP2Q9UG22 337 aa15.52■□□□□ 0.07
AP4E1-202ENST00000558439 MOXD2PA6NHM9 499 aa15.51■□□□□ 0.07
AP4E1-202ENST00000558439 UBXN8O00124 270 aa15.51■□□□□ 0.07
AP4E1-202ENST00000558439 TLR5O60602 858 aa15.51■□□□□ 0.07
AP4E1-202ENST00000558439 KPNA6O60684 536 aa15.51■□□□□ 0.07
AP4E1-202ENST00000558439 PARNO95453 639 aaKnown RBP15.51■□□□□ 0.07
AP4E1-202ENST00000558439 TSTD2Q5T7W7 516 aa15.51■□□□□ 0.07
AP4E1-202ENST00000558439 TMEM135Q86UB9 458 aa15.51■□□□□ 0.07
AP4E1-202ENST00000558439 DENND1CQ8IV53 801 aa15.51■□□□□ 0.07
AP4E1-202ENST00000558439 FAM126BQ8IXS8 530 aa15.51■□□□□ 0.07
AP4E1-202ENST00000558439 CENPIQ92674 756 aaPredicted RBP15.51■□□□□ 0.07
AP4E1-202ENST00000558439 FCRL5Q96RD9 977 aa15.51■□□□□ 0.07
AP4E1-202ENST00000558439 TBCDQ9BTW9 1192 aa15.51■□□□□ 0.07
AP4E1-202ENST00000558439 CLPBQ9H078 707 aa15.51■□□□□ 0.07
AP4E1-202ENST00000558439 PTGESO14684 152 aa15.51■□□□□ 0.07
AP4E1-202ENST00000558439 AKT1P31749 480 aa15.51■□□□□ 0.07
AP4E1-202ENST00000558439 DUSP4Q13115 394 aa15.51■□□□□ 0.07
AP4E1-202ENST00000558439 RTL3Q8N8U3 475 aaKnown RBP15.51■□□□□ 0.07
AP4E1-202ENST00000558439 OR4K2Q8NGD2 314 aa15.51■□□□□ 0.07
AP4E1-202ENST00000558439 OR4L1Q8NH43 312 aa15.51■□□□□ 0.07
AP4E1-202ENST00000558439 FIG4Q92562 907 aa15.51■□□□□ 0.07
AP4E1-202ENST00000558439 SYT17Q9BSW7 474 aa15.51■□□□□ 0.07
AP4E1-202ENST00000558439 SLC25A51Q9H1U9 297 aa15.51■□□□□ 0.07
AP4E1-202ENST00000558439 FBRSL1Q9HCM7 1045 aaKnown RBP15.51■□□□□ 0.07
AP4E1-202ENST00000558439 MTF2Q9Y483 593 aaPredicted RBP15.51■□□□□ 0.07
AP4E1-202ENST00000558439 NUMBLQ9Y6R0 609 aa15.51■□□□□ 0.07
AP4E1-202ENST00000558439 RNASEH1O60930 286 aaKnown RBP15.51■□□□□ 0.07
AP4E1-202ENST00000558439 CKMT2P17540 419 aa15.51■□□□□ 0.07
AP4E1-202ENST00000558439 GJA5P36382 358 aa15.51■□□□□ 0.07
AP4E1-202ENST00000558439 ALDH7A1P49419 539 aaKnown RBP15.51■□□□□ 0.07
AP4E1-202ENST00000558439 GRIK3Q13003 919 aa15.51■□□□□ 0.07
AP4E1-202ENST00000558439 DPYSQ14117 519 aa15.51■□□□□ 0.07
AP4E1-202ENST00000558439 TIGD2Q4W5G0 525 aa15.51■□□□□ 0.07
AP4E1-202ENST00000558439 STXBP5Q5T5C0 1151 aa15.51■□□□□ 0.07
AP4E1-202ENST00000558439 IL27RAQ6UWB1 636 aa15.51■□□□□ 0.07
AP4E1-202ENST00000558439 CYP4V2Q6ZWL3 525 aaPredicted RBP15.51■□□□□ 0.07
AP4E1-202ENST00000558439 GPSM1Q86YR5 675 aa15.51■□□□□ 0.07
AP4E1-202ENST00000558439 C19orf60Q96EN9 201 aa15.51■□□□□ 0.07
AP4E1-202ENST00000558439 CCDC28BQ9BUN5 200 aa15.51■□□□□ 0.07
AP4E1-202ENST00000558439 MYOCOSA0A1B0GUC4 107 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 CHRNB3Q05901 458 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 GTF2H3Q13889 308 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 ARHGEF7Q14155 803 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 PKDCCQ504Y2 493 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 STEAP4Q687X5 459 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 C14orf80Q86SX3 495 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 STK32CQ86UX6 486 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 FAM47BQ8NA70 645 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 SEPT3Q9UH03 358 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms