RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 RWDD2BP57060 319 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 RPL26P61254 145 aaKnown RBP8.53□□□□□ -1.04
TPM1-213ENST00000558400 IFI35P80217 286 aaPredicted RBP8.53□□□□□ -1.04
TPM1-213ENST00000558400 AP1B1Q10567 949 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 LRRC14Q15048 493 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 PPP2R5EQ16537 467 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 HS1BP3Q53T59 392 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 KYAT3Q6YP21 454 aaKnown RBP8.53□□□□□ -1.04
TPM1-213ENST00000558400 SPOCD1Q6ZMY3 1216 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 GLRX5Q86SX6 157 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 TMEM139Q8IV31 216 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 CCDC50Q8IVM0 306 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 NAXDQ8IW45 347 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 RAVER1Q8IY67 606 aaKnown RBP8.53□□□□□ -1.04
TPM1-213ENST00000558400 PGBD5Q8N414 524 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 UBL4BQ8N7F7 174 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 KDF1Q8NAX2 398 aaPredicted RBP8.53□□□□□ -1.04
TPM1-213ENST00000558400 DEFB124Q8NES8 71 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 ATL2Q8NHH9 583 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 PDCD6IPQ8WUM4 868 aaKnown RBP8.53□□□□□ -1.04
TPM1-213ENST00000558400 TFB1MQ8WVM0 346 aaKnown RBP8.53□□□□□ -1.04
TPM1-213ENST00000558400 SCRN2Q96FV2 425 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 VAT1Q99536 393 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 LGMNQ99538 433 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 KLF6Q99612 283 aaPredicted RBP8.53□□□□□ -1.04
TPM1-213ENST00000558400 IL12RB2Q99665 862 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 LACRTQ9GZZ8 138 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 IL21RQ9HBE5 538 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 SALL4Q9UJQ4 1053 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 AMFRQ9UKV5 643 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 RPL26L1Q9UNX3 145 aaKnown RBP8.53□□□□□ -1.04
TPM1-213ENST00000558400 APOBEC2Q9Y235 224 aaKnown RBP8.53□□□□□ -1.04
TPM1-213ENST00000558400 REXO2Q9Y3B8 237 aaKnown RBP8.53□□□□□ -1.04
TPM1-213ENST00000558400 HYOU1Q9Y4L1 999 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 PCDHGC4Q9Y5F7 938 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 DUSP10Q9Y6W6 482 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 CABIN1Q9Y6J0 2220 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 TRPM6Q9BX84 2022 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 ADAMTS20P59510 1910 aa8.52□□□□□ -1.04
TPM1-213ENST00000558400 TNRC6BQ9UPQ9 1833 aaKnown RBP8.52□□□□□ -1.04
TPM1-213ENST00000558400 ASCC3Q8N3C0 2202 aaKnown RBP8.52□□□□□ -1.05
TPM1-213ENST00000558400 SPTY2D1-AS1A0A0U1RR47 76 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 POM121BA6NF01 834 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 HACD1B0YJ81 288 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 PSMD11O00231 422 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 PDE2AO00408 941 aaPredicted RBP8.52□□□□□ -1.05
TPM1-213ENST00000558400 CBFA2T3O75081 653 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 TJP3O95049 919 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 PGLSO95336 258 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 ELFN1P0C7U0 828 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 CTNNA2P26232 953 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 HTR1BP28222 390 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 MMP12P39900 470 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 LIG3P49916 1009 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 BLKP51451 505 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 THOP1P52888 689 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 EPHB1P54762 984 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 CLDN2P57739 230 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 PFN3P60673 137 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 MAXP61244 160 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 HNRNPKP61978 463 aaKnown RBP eCLIP8.52□□□□□ -1.05
TPM1-213ENST00000558400 SIM1P81133 766 aaPredicted RBP8.52□□□□□ -1.05
TPM1-213ENST00000558400 XRCC4Q13426 336 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 ARHGEF7Q14155 803 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 FGL2Q14314 439 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 TEX44Q53QW1 395 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 PRAMEF14Q5SWL7 426 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 CCDC181Q5TID7 509 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 KAZNQ674X7 775 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 CCDC70Q6NSX1 233 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 LAYNQ6UX15 382 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 LIPIQ6XZB0 460 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 GCNT7Q6ZNI0 430 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 USP45Q70EL2 814 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 DPPA4Q7L190 304 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 PEX26Q7Z412 305 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 PTAR1Q7Z6K3 402 aaPredicted RBP8.52□□□□□ -1.05
TPM1-213ENST00000558400 NT5DC3Q86UY8 548 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 SPATS2Q86XZ4 545 aaKnown RBP8.52□□□□□ -1.05
TPM1-213ENST00000558400 LRRC8AQ8IWT6 810 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 ACRBPQ8NEB7 543 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 OR13H1Q8NG92 308 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 SAP25Q8TEE9 199 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 BTN2A2Q8WVV5 523 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 OLFM3Q96PB7 478 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 SRPK1Q96SB4 655 aaKnown RBP8.52□□□□□ -1.05
TPM1-213ENST00000558400 WRAP53Q9BUR4 548 aaKnown RBP8.52□□□□□ -1.05
TPM1-213ENST00000558400 ADGRE3Q9BY15 652 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 FZD3Q9NPG1 666 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 PCOLCE2Q9UKZ9 415 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 TFR2Q9UP52 801 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 LHX6Q9UPM6 363 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 ITM2BQ9Y287 266 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 RAI2Q9Y5P3 530 aa8.52□□□□□ -1.05
TPM1-213ENST00000558400 ASH1LQ9NR48 2969 aaKnown RBP8.52□□□□□ -1.05
TPM1-213ENST00000558400 hCG_1818297A0A087WSY0 165 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 MACROD2A1Z1Q3 448 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 TMEM8BA6NDV4 472 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 GOLGA6L9A6NEM1 432 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 GOLGA6L3A6NEY3 463 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms