RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 TUBD1Q9UJT1 453 aa6.38□□□□□ -1.39
CLPX-202ENST00000558103 FBXO2Q9UK22 296 aaPredicted RBP6.38□□□□□ -1.39
CLPX-202ENST00000558103 ITGA11Q9UKX5 1188 aa6.38□□□□□ -1.39
CLPX-202ENST00000558103 ARHGAP26Q9UNA1 814 aa6.38□□□□□ -1.39
CLPX-202ENST00000558103 AGAP1Q9UPQ3 857 aa6.38□□□□□ -1.39
CLPX-202ENST00000558103 REXO2Q9Y3B8 237 aaKnown RBP6.38□□□□□ -1.39
CLPX-202ENST00000558103 SNX9Q9Y5X1 595 aa6.38□□□□□ -1.39
CLPX-202ENST00000558103 PTPRJQ12913 1337 aa6.38□□□□□ -1.39
CLPX-202ENST00000558103 IGF2RP11717 2491 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 PTPRBP23467 1997 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 MYMKA6NI61 221 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 DRGXA6NNA5 263 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 C4orf47A7E2U8 309 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 CDX4O14627 284 aaPredicted RBP6.37□□□□□ -1.39
CLPX-202ENST00000558103 ATP2C2O75185 946 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 RHOBTB1O94844 696 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 SNUPNO95149 360 aaKnown RBP6.37□□□□□ -1.39
CLPX-202ENST00000558103 GCNT3O95395 438 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 NFATC1O95644 943 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 CAVIN2O95810 425 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 PROS1P07225 676 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 TMEM191BP0C7N4 346 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 GAP43P17677 238 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 MAKP20794 623 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 C5AR1P21730 350 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 BCKDHBP21953 392 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 NR4A1P22736 598 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 PCSK1P29120 753 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 EIF2DP41214 584 aaKnown RBP6.37□□□□□ -1.39
CLPX-202ENST00000558103 LHX1P48742 406 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 NOVA1P51513 510 aaKnown RBP6.37□□□□□ -1.39
CLPX-202ENST00000558103 DGKEP52429 567 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 PSMC1P62191 440 aaKnown RBP6.37□□□□□ -1.39
CLPX-202ENST00000558103 CREB5Q02930 508 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 ALCAMQ13740 583 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 KCNB1Q14721 858 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 ATXN7L2Q5T6C5 722 aaPredicted RBP6.37□□□□□ -1.39
CLPX-202ENST00000558103 ANO7Q6IWH7 933 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 VSTM1Q6UX27 236 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 SPATA2LQ8IUW3 424 aaPredicted RBP6.37□□□□□ -1.39
CLPX-202ENST00000558103 SCN4BQ8IWT1 228 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 FSIP1Q8NA03 581 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 TSTD1Q8NFU3 115 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 OLIG1Q8TAK6 271 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 CCHCR1Q8TD31 782 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 MYLPFQ96A32 169 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 SPATA17Q96L03 361 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 ACCSQ96QU6 501 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 SYT15Q9BQS2 421 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 TTLL2Q9BWV7 592 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 TPSD1Q9BZJ3 242 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 SLC13A1Q9BZW2 595 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 LINC00597Q9H2U6 94 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 PDE11AQ9HCR9 933 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 TMEM140Q9NV12 185 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 TRPM5Q9NZQ8 1165 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 FAM30AQ9NZY2 134 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 TBC1D7Q9P0N9 293 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 AJAP1Q9UKB5 411 aaPredicted RBP6.37□□□□□ -1.39
CLPX-202ENST00000558103 MMP17Q9ULZ9 603 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 EXOC7Q9UPT5 735 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 SMC3Q9UQE7 1217 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 NME7Q9Y5B8 376 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 CACNA1EQ15878 2313 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 CKAP5Q14008 2032 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 PLXNB3Q9ULL4 1909 aa6.37□□□□□ -1.39
CLPX-202ENST00000558103 TMEM131Q92545 1883 aa6.36□□□□□ -1.39
CLPX-202ENST00000558103 DSPP15924 2871 aaKnown RBP6.36□□□□□ -1.39
CLPX-202ENST00000558103 GOLGA8IPA6NC78 632 aa6.36□□□□□ -1.39
CLPX-202ENST00000558103 GOLGA8JA6NMD2 632 aa6.36□□□□□ -1.39
CLPX-202ENST00000558103 DIRC3C9JPN6 131 aa6.36□□□□□ -1.39
CLPX-202ENST00000558103 OAS1P00973 400 aaKnown RBP6.36□□□□□ -1.39
CLPX-202ENST00000558103 AMY1AP04745 511 aa6.36□□□□□ -1.39
CLPX-202ENST00000558103 KRT19P08727 400 aa6.36□□□□□ -1.39
CLPX-202ENST00000558103 HDCP19113 662 aa6.36□□□□□ -1.39
CLPX-202ENST00000558103 CSRP1P21291 193 aaKnown RBP6.36□□□□□ -1.39
CLPX-202ENST00000558103 WARSP23381 471 aaKnown RBP6.36□□□□□ -1.39
CLPX-202ENST00000558103 LMO2P25791 158 aa6.36□□□□□ -1.39
CLPX-202ENST00000558103 PTGS2P35354 604 aa6.36□□□□□ -1.39
CLPX-202ENST00000558103 PDE6CP51160 858 aa6.36□□□□□ -1.39
CLPX-202ENST00000558103 NOP14P78316 857 aaKnown RBP6.36□□□□□ -1.39
CLPX-202ENST00000558103 SLC7A9P82251 487 aa6.36□□□□□ -1.39
CLPX-202ENST00000558103 RBP5P82980 135 aa6.36□□□□□ -1.39
CLPX-202ENST00000558103 DAB2IPQ5VWQ8 1189 aa6.36□□□□□ -1.39
CLPX-202ENST00000558103 METRNLQ641Q3 311 aa6.36□□□□□ -1.39
CLPX-202ENST00000558103 LMBRD2Q68DH5 695 aaPredicted RBP6.36□□□□□ -1.39
CLPX-202ENST00000558103 C4orf50Q6ZRC1 276 aa6.36□□□□□ -1.39
CLPX-202ENST00000558103 DENND5BQ6ZUT9 1274 aa6.36□□□□□ -1.39
CLPX-202ENST00000558103 GDF7Q7Z4P5 450 aa6.36□□□□□ -1.39
CLPX-202ENST00000558103 SFTPA1Q8IWL2 248 aa6.36□□□□□ -1.39
CLPX-202ENST00000558103 CHPFQ8IZ52 775 aa6.36□□□□□ -1.39
CLPX-202ENST00000558103 GPD1LQ8N335 351 aa6.36□□□□□ -1.39
CLPX-202ENST00000558103 CSGALNACT2Q8N6G5 542 aa6.36□□□□□ -1.39
CLPX-202ENST00000558103 OR5B17Q8NGF7 314 aa6.36□□□□□ -1.39
CLPX-202ENST00000558103 CCDC26Q8TAB7 109 aa6.36□□□□□ -1.39
CLPX-202ENST00000558103 CLIP3Q96DZ5 547 aa6.36□□□□□ -1.39
CLPX-202ENST00000558103 PCED1BQ96HM7 432 aa6.36□□□□□ -1.39
CLPX-202ENST00000558103 SORCS2Q96PQ0 1159 aa6.36□□□□□ -1.39
CLPX-202ENST00000558103 PCED1AQ9H1Q7 454 aa6.36□□□□□ -1.39
CLPX-202ENST00000558103 ZNF768Q9H5H4 540 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms