RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 RPLP0P6Q8NHW5 317 aa16.94■□□□□ 0.3
SNX1-203ENST00000558040 PEX13Q92968 403 aa16.94■□□□□ 0.3
SNX1-203ENST00000558040 ZNF669Q96BR6 464 aaPredicted RBP16.94■□□□□ 0.3
SNX1-203ENST00000558040 FAM129BQ96TA1 746 aa16.94■□□□□ 0.3
SNX1-203ENST00000558040 NELL2Q99435 816 aa16.94■□□□□ 0.3
SNX1-203ENST00000558040 CCDC77Q9BR77 488 aa16.94■□□□□ 0.3
SNX1-203ENST00000558040 RSPH9Q9H1X1 276 aaPredicted RBP16.94■□□□□ 0.3
SNX1-203ENST00000558040 EPB41L4BQ9H329 900 aa16.94■□□□□ 0.3
SNX1-203ENST00000558040 ACBD3Q9H3P7 528 aa16.94■□□□□ 0.3
SNX1-203ENST00000558040 VIPAS39Q9H9C1 493 aa16.94■□□□□ 0.3
SNX1-203ENST00000558040 CHRAC1Q9NRG0 131 aa16.94■□□□□ 0.3
SNX1-203ENST00000558040 RIMKLBQ9ULI2 386 aa16.94■□□□□ 0.3
SNX1-203ENST00000558040 PPIL1Q9Y3C6 166 aa16.94■□□□□ 0.3
SNX1-203ENST00000558040 ANTXRLA6NF34 631 aa16.93■□□□□ 0.3
SNX1-203ENST00000558040 C16orf96A6NNT2 1141 aa16.93■□□□□ 0.3
SNX1-203ENST00000558040 UPK3BL1B0FP48 263 aa16.93■□□□□ 0.3
SNX1-203ENST00000558040 UPK3BL2E5RIL1 263 aa16.93■□□□□ 0.3
SNX1-203ENST00000558040 ATP8B1O43520 1251 aa16.93■□□□□ 0.3
SNX1-203ENST00000558040 ADH1BP00325 375 aa16.93■□□□□ 0.3
SNX1-203ENST00000558040 PIRTP0C851 137 aa16.93■□□□□ 0.3
SNX1-203ENST00000558040 CYP2A6P11509 494 aaPredicted RBP16.93■□□□□ 0.3
SNX1-203ENST00000558040 CTPS1P17812 591 aa16.93■□□□□ 0.3
SNX1-203ENST00000558040 ABL2P42684 1182 aa16.93■□□□□ 0.3
SNX1-203ENST00000558040 PSMD8P48556 350 aa16.93■□□□□ 0.3
SNX1-203ENST00000558040 SUOXP51687 545 aa16.93■□□□□ 0.3
SNX1-203ENST00000558040 EIF3BP55884 814 aaKnown RBP16.93■□□□□ 0.3
SNX1-203ENST00000558040 GPX6P59796 221 aa16.93■□□□□ 0.3
SNX1-203ENST00000558040 IFFO1Q0D2I5 559 aa16.93■□□□□ 0.3
SNX1-203ENST00000558040 FRG1Q14331 258 aaKnown RBP16.93■□□□□ 0.3
SNX1-203ENST00000558040 UGP2Q16851 508 aa16.93■□□□□ 0.3
SNX1-203ENST00000558040 ANKRD20A4Q4UJ75 823 aa16.93■□□□□ 0.3
SNX1-203ENST00000558040 TSTD2Q5T7W7 516 aa16.93■□□□□ 0.3
SNX1-203ENST00000558040 ZNF776Q68DI1 518 aaPredicted RBP16.93■□□□□ 0.3
SNX1-203ENST00000558040 ZSWIM9Q86XI8 627 aa16.93■□□□□ 0.3
SNX1-203ENST00000558040 MMAAQ8IVH4 418 aaKnown RBP16.93■□□□□ 0.3
SNX1-203ENST00000558040 GJD3Q8N144 294 aa16.93■□□□□ 0.3
SNX1-203ENST00000558040 OR2T3Q8NH03 318 aa16.93■□□□□ 0.3
SNX1-203ENST00000558040 SCRN2Q96FV2 425 aa16.93■□□□□ 0.3
SNX1-203ENST00000558040 MCCC1Q96RQ3 725 aaPredicted RBP16.93■□□□□ 0.3
SNX1-203ENST00000558040 LYSMD1Q96S90 227 aa16.93■□□□□ 0.3
SNX1-203ENST00000558040 RUFY1Q96T51 708 aa16.93■□□□□ 0.3
SNX1-203ENST00000558040 FUT8Q9BYC5 575 aa16.93■□□□□ 0.3
SNX1-203ENST00000558040 GPR63Q9BZJ6 419 aa16.93■□□□□ 0.3
SNX1-203ENST00000558040 PLAAQ9Y263 795 aa16.93■□□□□ 0.3
SNX1-203ENST00000558040 ZNF711Q9Y462 761 aa16.93■□□□□ 0.3
SNX1-203ENST00000558040 SPO11Q9Y5K1 396 aa16.93■□□□□ 0.3
SNX1-203ENST00000558040 XIRP2A4UGR9 3374 aa16.92■□□□□ 0.3
SNX1-203ENST00000558040 KANSL1LA0AUZ9 987 aa16.92■□□□□ 0.3
SNX1-203ENST00000558040 KRBA1A5PL33 1030 aa16.92■□□□□ 0.3
SNX1-203ENST00000558040 MROH6A6NGR9 719 aa16.92■□□□□ 0.3
SNX1-203ENST00000558040 LDB2O43679 373 aa16.92■□□□□ 0.3
SNX1-203ENST00000558040 ADAM23O75077 832 aa16.92■□□□□ 0.3
SNX1-203ENST00000558040 PRKCGP05129 697 aa16.92■□□□□ 0.3
SNX1-203ENST00000558040 IVLP07476 585 aa16.92■□□□□ 0.3
SNX1-203ENST00000558040 ALPIP09923 528 aa16.92■□□□□ 0.3
SNX1-203ENST00000558040 LPOP22079 712 aaPredicted RBP16.92■□□□□ 0.3
SNX1-203ENST00000558040 CCDC15Q0P6D6 951 aa16.92■□□□□ 0.3
SNX1-203ENST00000558040 STAT4Q14765 748 aa16.92■□□□□ 0.3
SNX1-203ENST00000558040 SKIDA1Q1XH10 827 aa16.92■□□□□ 0.3
SNX1-203ENST00000558040 KLHL38Q2WGJ6 581 aa16.92■□□□□ 0.3
SNX1-203ENST00000558040 ERAP2Q6P179 960 aa16.92■□□□□ 0.3
SNX1-203ENST00000558040 ZNF449Q6P9G9 518 aa16.92■□□□□ 0.3
SNX1-203ENST00000558040 LRIG3Q6UXM1 1119 aa16.92■□□□□ 0.3
SNX1-203ENST00000558040 CYS1Q717R9 158 aa16.92■□□□□ 0.3
SNX1-203ENST00000558040 SIX5Q8N196 739 aa16.92■□□□□ 0.3
SNX1-203ENST00000558040 STYXQ8WUJ0 223 aa16.92■□□□□ 0.3
SNX1-203ENST00000558040 MFSD3Q96ES6 412 aa16.92■□□□□ 0.3
SNX1-203ENST00000558040 LTB4R2Q9NPC1 389 aa16.92■□□□□ 0.3
SNX1-203ENST00000558040 SARDHQ9UL12 918 aa16.92■□□□□ 0.3
SNX1-203ENST00000558040 MMP17Q9ULZ9 603 aa16.92■□□□□ 0.3
SNX1-203ENST00000558040 FAM169AQ9Y6X4 670 aa16.92■□□□□ 0.3
SNX1-203ENST00000558040 TCF20Q9UGU0 1960 aaKnown RBP16.91■□□□□ 0.3
SNX1-203ENST00000558040 CKAP5Q14008 2032 aa16.91■□□□□ 0.3
SNX1-203ENST00000558040 C1orf232A0A0U1RR37 186 aa16.91■□□□□ 0.3
SNX1-203ENST00000558040 TCRBV9S1A1TA0A576 114 aa16.91■□□□□ 0.3
SNX1-203ENST00000558040 CHRNB1P11230 501 aa16.91■□□□□ 0.3
SNX1-203ENST00000558040 TIMP2P16035 220 aa16.91■□□□□ 0.3
SNX1-203ENST00000558040 C5AR1P21730 350 aa16.91■□□□□ 0.3
SNX1-203ENST00000558040 NMBRP28336 390 aa16.91■□□□□ 0.3
SNX1-203ENST00000558040 HNF1BP35680 557 aa16.91■□□□□ 0.3
SNX1-203ENST00000558040 NEK3P51956 506 aa16.91■□□□□ 0.3
SNX1-203ENST00000558040 SATB1Q01826 763 aa16.91■□□□□ 0.3
SNX1-203ENST00000558040 UBXN2BQ14CS0 331 aa16.91■□□□□ 0.3
SNX1-203ENST00000558040 CST6Q15828 149 aa16.91■□□□□ 0.3
SNX1-203ENST00000558040 LONRF1Q17RB8 773 aa16.91■□□□□ 0.3
SNX1-203ENST00000558040 POM121L1PQ3SYA9 428 aa16.91■□□□□ 0.3
SNX1-203ENST00000558040 FBXL19Q6PCT2 694 aa16.91■□□□□ 0.3
SNX1-203ENST00000558040 CES3Q6UWW8 571 aa16.91■□□□□ 0.3
SNX1-203ENST00000558040 PARS2Q7L3T8 475 aaKnown RBP16.91■□□□□ 0.3
SNX1-203ENST00000558040 TTC7BQ86TV6 843 aa16.91■□□□□ 0.3
SNX1-203ENST00000558040 IQCKQ8N0W5 287 aa16.91■□□□□ 0.3
SNX1-203ENST00000558040 MDGA1Q8NFP4 955 aa16.91■□□□□ 0.3
SNX1-203ENST00000558040 GABPB2Q8TAK5 448 aaPredicted RBP16.91■□□□□ 0.3
SNX1-203ENST00000558040 UHMK1Q8TAS1 419 aaKnown RBP16.91■□□□□ 0.3
SNX1-203ENST00000558040 FBF1Q8TES7 1133 aa16.91■□□□□ 0.3
SNX1-203ENST00000558040 CDKL2Q92772 493 aa16.91■□□□□ 0.3
SNX1-203ENST00000558040 CYTH2Q99418 400 aa16.91■□□□□ 0.3
SNX1-203ENST00000558040 C19orf43Q9BQ61 176 aa16.91■□□□□ 0.3
SNX1-203ENST00000558040 TRIM56Q9BRZ2 755 aaKnown RBP16.91■□□□□ 0.3
SNX1-203ENST00000558040 ACSS3Q9H6R3 686 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms