RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 SFSWAPQ12872 951 aaKnown RBP15.35■□□□□ 0.05
NEDD1-213ENST00000557644 TBC1D3GQ6DHY5 549 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 TBC1D3CQ6IPX1 549 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 DENND5AQ6IQ26 1287 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 TBC1D3Q8IZP1 549 aaPredicted RBP15.35■□□□□ 0.05
NEDD1-213ENST00000557644 ZBTB44Q8NCP5 570 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 RAB7BQ96AH8 199 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 SCRN2Q96FV2 425 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 LRRC40Q9H9A6 602 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 GOLGA6AQ9NYA3 693 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 PPIL1Q9Y3C6 166 aa15.35■□□□□ 0.05
NEDD1-213ENST00000557644 GOLGA8CPA6NN73 597 aa15.34■□□□□ 0.05
NEDD1-213ENST00000557644 PCDH8O95206 1070 aa15.34■□□□□ 0.05
NEDD1-213ENST00000557644 LHCGRP22888 699 aa15.34■□□□□ 0.05
NEDD1-213ENST00000557644 RPL26P61254 145 aaKnown RBP15.34■□□□□ 0.05
NEDD1-213ENST00000557644 PPP2CBP62714 309 aa15.34■□□□□ 0.05
NEDD1-213ENST00000557644 PPP2CAP67775 309 aa15.34■□□□□ 0.05
NEDD1-213ENST00000557644 SLC7A5Q01650 507 aa15.34■□□□□ 0.05
NEDD1-213ENST00000557644 CCDC15Q0P6D6 951 aa15.34■□□□□ 0.05
NEDD1-213ENST00000557644 KCNJ11Q14654 390 aa15.34■□□□□ 0.05
NEDD1-213ENST00000557644 ERAP2Q6P179 960 aa15.34■□□□□ 0.05
NEDD1-213ENST00000557644 SYDE1Q6ZW31 735 aaPredicted RBP15.34■□□□□ 0.05
NEDD1-213ENST00000557644 MAATS1Q7Z4T9 603 aa15.34■□□□□ 0.05
NEDD1-213ENST00000557644 GAB3Q8WWW8 586 aa15.34■□□□□ 0.05
NEDD1-213ENST00000557644 MCCC1Q96RQ3 725 aaPredicted RBP15.34■□□□□ 0.05
NEDD1-213ENST00000557644 RPL26L1Q9UNX3 145 aaKnown RBP15.34■□□□□ 0.05
NEDD1-213ENST00000557644 SPO11Q9Y5K1 396 aa15.34■□□□□ 0.05
NEDD1-213ENST00000557644 GON4LQ3T8J9 2241 aa15.34■□□□□ 0.05
NEDD1-213ENST00000557644 WDR87Q6ZQQ6 2873 aa15.34■□□□□ 0.05
NEDD1-213ENST00000557644 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.34■□□□□ 0.05
NEDD1-213ENST00000557644 TMEM63AO94886 807 aa15.34■□□□□ 0.05
NEDD1-213ENST00000557644 TNNT3P45378 269 aaPredicted RBP15.34■□□□□ 0.05
NEDD1-213ENST00000557644 RPL6Q02878 288 aaKnown RBP15.34■□□□□ 0.05
NEDD1-213ENST00000557644 RALGDSQ12967 914 aa15.34■□□□□ 0.05
NEDD1-213ENST00000557644 MTM1Q13496 603 aa15.34■□□□□ 0.05
NEDD1-213ENST00000557644 SEL1L3Q68CR1 1132 aa15.34■□□□□ 0.05
NEDD1-213ENST00000557644 USP45Q70EL2 814 aa15.34■□□□□ 0.05
NEDD1-213ENST00000557644 TMEFF1Q8IYR6 380 aa15.34■□□□□ 0.05
NEDD1-213ENST00000557644 MMGT1Q8N4V1 131 aa15.34■□□□□ 0.05
NEDD1-213ENST00000557644 OR52K1Q8NGK4 314 aa15.34■□□□□ 0.05
NEDD1-213ENST00000557644 ZFR2Q9UPR6 939 aaKnown RBP15.34■□□□□ 0.05
NEDD1-213ENST00000557644 SHOC2Q9UQ13 582 aa15.34■□□□□ 0.05
NEDD1-213ENST00000557644 R4GN57 208 aa15.34■□□□□ 0.05
NEDD1-213ENST00000557644 CAPN8A6NHC0 703 aa15.33■□□□□ 0.04
NEDD1-213ENST00000557644 MAP3K13O43283 966 aa15.33■□□□□ 0.04
NEDD1-213ENST00000557644 AP1G1O43747 822 aa15.33■□□□□ 0.04
NEDD1-213ENST00000557644 MMP20O60882 483 aa15.33■□□□□ 0.04
NEDD1-213ENST00000557644 NDUFS2O75306 463 aa15.33■□□□□ 0.04
NEDD1-213ENST00000557644 SUN1O94901 812 aa15.33■□□□□ 0.04
NEDD1-213ENST00000557644 TPH1P17752 444 aa15.33■□□□□ 0.04
NEDD1-213ENST00000557644 HLA-DPA1P20036 260 aa15.33■□□□□ 0.04
NEDD1-213ENST00000557644 MAT2AP31153 395 aaKnown RBP15.33■□□□□ 0.04
NEDD1-213ENST00000557644 CCDC70Q6NSX1 233 aa15.33■□□□□ 0.04
NEDD1-213ENST00000557644 C8orf74Q6P047 294 aa15.33■□□□□ 0.04
NEDD1-213ENST00000557644 CRTC1Q6UUV9 634 aa15.33■□□□□ 0.04
NEDD1-213ENST00000557644 OR2T34Q8NGX1 318 aa15.33■□□□□ 0.04
NEDD1-213ENST00000557644 CCHCR1Q8TD31 782 aa15.33■□□□□ 0.04
NEDD1-213ENST00000557644 KLK6Q92876 244 aa15.33■□□□□ 0.04
NEDD1-213ENST00000557644 SNX24Q9Y343 169 aa15.33■□□□□ 0.04
NEDD1-213ENST00000557644 FAM187AA6NFU0 413 aa15.33■□□□□ 0.04
NEDD1-213ENST00000557644 ERI2A8K979 691 aaKnown RBP15.33■□□□□ 0.04
NEDD1-213ENST00000557644 EFCAB8A8MWE9 144 aa15.33■□□□□ 0.04
NEDD1-213ENST00000557644 GOLGA8MH3BSY2 632 aa15.33■□□□□ 0.04
NEDD1-213ENST00000557644 AURKAO14965 403 aa15.33■□□□□ 0.04
NEDD1-213ENST00000557644 PSMD3O43242 534 aa15.33■□□□□ 0.04
NEDD1-213ENST00000557644 RPL21P46778 160 aaKnown RBP15.33■□□□□ 0.04
NEDD1-213ENST00000557644 ELP6Q0PNE2 266 aa15.33■□□□□ 0.04
NEDD1-213ENST00000557644 RNASEH2BQ5TBB1 312 aaKnown RBP15.33■□□□□ 0.04
NEDD1-213ENST00000557644 DENND2CQ68D51 928 aa15.33■□□□□ 0.04
NEDD1-213ENST00000557644 NAPEPLDQ6IQ20 393 aa15.33■□□□□ 0.04
NEDD1-213ENST00000557644 DPPA4Q7L190 304 aa15.33■□□□□ 0.04
NEDD1-213ENST00000557644 LRRC45Q96CN5 670 aa15.33■□□□□ 0.04
NEDD1-213ENST00000557644 ERP44Q9BS26 406 aa15.33■□□□□ 0.04
NEDD1-213ENST00000557644 DPH5Q9H2P9 285 aa15.33■□□□□ 0.04
NEDD1-213ENST00000557644 EIF2B3Q9NR50 452 aaKnown RBP15.33■□□□□ 0.04
NEDD1-213ENST00000557644 COQ6Q9Y2Z9 468 aa15.33■□□□□ 0.04
NEDD1-213ENST00000557644 PCDHGA2Q9Y5H1 932 aa15.33■□□□□ 0.04
NEDD1-213ENST00000557644 MUC6Q6W4X9 2439 aa15.33■□□□□ 0.04
NEDD1-213ENST00000557644 A0A1W2PQU0 124 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 IGLON5A6NGN9 336 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 LRRC72A6NJI9 287 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 DNALI1O14645 258 aaPredicted RBP15.32■□□□□ 0.04
NEDD1-213ENST00000557644 TSPAN6O43657 245 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 RNGTTO60942 597 aaKnown RBP15.32■□□□□ 0.04
NEDD1-213ENST00000557644 SLC4A1P02730 911 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 FGF1P05230 155 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 MAGEA6P43360 314 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 LIG3P49916 1009 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 SUOXP51687 545 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 MSLNQ13421 630 aaPredicted RBP15.32■□□□□ 0.04
NEDD1-213ENST00000557644 TRADDQ15628 312 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 CNGA3Q16281 694 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 CDKN3Q16667 212 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 IZUMO3Q5VZ72 239 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 LRRC66Q68CR7 880 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 ZNF534Q76KX8 674 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 NAT8LQ8N9F0 302 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 BLOC1S5Q8TDH9 187 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 EID2BQ96D98 161 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 ARNT2Q9HBZ2 717 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms