RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 BLKP51451 505 aa8.78□□□□□ -1
VRK1-206ENST00000557222 DNA2P51530 1060 aa8.78□□□□□ -1
VRK1-206ENST00000557222 SNRPD1P62314 119 aaKnown RBP8.78□□□□□ -1
VRK1-206ENST00000557222 EIF2B5Q13144 721 aaKnown RBP8.78□□□□□ -1
VRK1-206ENST00000557222 EIF3IQ13347 325 aaKnown RBP8.78□□□□□ -1
VRK1-206ENST00000557222 CDKN3Q16667 212 aa8.78□□□□□ -1
VRK1-206ENST00000557222 MAN2A1Q16706 1144 aa8.78□□□□□ -1
VRK1-206ENST00000557222 MYLK3Q32MK0 819 aa8.78□□□□□ -1
VRK1-206ENST00000557222 ARL13BQ3SXY8 428 aa8.78□□□□□ -1
VRK1-206ENST00000557222 ZNF542PQ5EBM4 170 aa8.78□□□□□ -1
VRK1-206ENST00000557222 FAM102AQ5T9C2 384 aaPredicted RBP8.78□□□□□ -1
VRK1-206ENST00000557222 ARHGAP40Q5TG30 622 aa8.78□□□□□ -1
VRK1-206ENST00000557222 MANEALQ5VSG8 457 aa8.78□□□□□ -1
VRK1-206ENST00000557222 ESRP1Q6NXG1 681 aaKnown RBP8.78□□□□□ -1
VRK1-206ENST00000557222 GUSBP11Q6P575 273 aa8.78□□□□□ -1
VRK1-206ENST00000557222 EFL1Q7Z2Z2 1120 aaKnown RBP8.78□□□□□ -1
VRK1-206ENST00000557222 ZNF677Q86XU0 584 aa8.78□□□□□ -1
VRK1-206ENST00000557222 FAM114A1Q8IWE2 563 aa8.78□□□□□ -1
VRK1-206ENST00000557222 FSTL5Q8N475 847 aaPredicted RBP8.78□□□□□ -1
VRK1-206ENST00000557222 MLKLQ8NB16 471 aa8.78□□□□□ -1
VRK1-206ENST00000557222 OR6C4Q8NGE1 309 aa8.78□□□□□ -1
VRK1-206ENST00000557222 OR2AP1Q8NGE2 309 aa8.78□□□□□ -1
VRK1-206ENST00000557222 HCAR2Q8TDS4 363 aa8.78□□□□□ -1
VRK1-206ENST00000557222 LMX1AQ8TE12 382 aa8.78□□□□□ -1
VRK1-206ENST00000557222 ARHGEF2Q92974 986 aaKnown RBP8.78□□□□□ -1
VRK1-206ENST00000557222 MED8Q96G25 268 aa8.78□□□□□ -1
VRK1-206ENST00000557222 LIN37Q96GY3 246 aaPredicted RBP8.78□□□□□ -1
VRK1-206ENST00000557222 PRR11Q96HE9 360 aaPredicted RBP8.78□□□□□ -1
VRK1-206ENST00000557222 NAF1Q96HR8 494 aaKnown RBP8.78□□□□□ -1
VRK1-206ENST00000557222 CPNE5Q9HCH3 593 aa8.78□□□□□ -1
VRK1-206ENST00000557222 TMEM248Q9NWD8 314 aa8.78□□□□□ -1
VRK1-206ENST00000557222 DKK3Q9UBP4 350 aa8.78□□□□□ -1
VRK1-206ENST00000557222 OR12D3Q9UGF7 316 aa8.78□□□□□ -1
VRK1-206ENST00000557222 HPCAL4Q9UM19 191 aa8.78□□□□□ -1
VRK1-206ENST00000557222 SATB2Q9UPW6 733 aa8.78□□□□□ -1
VRK1-206ENST00000557222 MFHAS1Q9Y4C4 1052 aa8.78□□□□□ -1
VRK1-206ENST00000557222 ENTPD2Q9Y5L3 495 aa8.78□□□□□ -1
VRK1-206ENST00000557222 SNX10Q9Y5X0 201 aa8.78□□□□□ -1
VRK1-206ENST00000557222 CHD5Q8TDI0 1954 aa8.78□□□□□ -1
VRK1-206ENST00000557222 CCDC187A0A096LP49 1063 aa8.77□□□□□ -1.01
VRK1-206ENST00000557222 NTN3O00634 580 aaPredicted RBP8.77□□□□□ -1.01
VRK1-206ENST00000557222 NEMP1O14524 444 aa8.77□□□□□ -1.01
VRK1-206ENST00000557222 ANXA6P08133 673 aa8.77□□□□□ -1.01
VRK1-206ENST00000557222 ITGA2BP08514 1039 aa8.77□□□□□ -1.01
VRK1-206ENST00000557222 ADRA1BP35368 520 aa8.77□□□□□ -1.01
VRK1-206ENST00000557222 SOX18P35713 384 aa8.77□□□□□ -1.01
VRK1-206ENST00000557222 FLT3P36888 993 aa8.77□□□□□ -1.01
VRK1-206ENST00000557222 THOP1P52888 689 aa8.77□□□□□ -1.01
VRK1-206ENST00000557222 APBA1Q02410 837 aa8.77□□□□□ -1.01
VRK1-206ENST00000557222 RAD51Q06609 339 aa8.77□□□□□ -1.01
VRK1-206ENST00000557222 DRAP1Q14919 205 aaPredicted RBP8.77□□□□□ -1.01
VRK1-206ENST00000557222 ELOCQ15369 112 aa8.77□□□□□ -1.01
VRK1-206ENST00000557222 DEFB133Q30KQ1 61 aa8.77□□□□□ -1.01
VRK1-206ENST00000557222 INO80DQ53TQ3 878 aaPredicted RBP8.77□□□□□ -1.01
VRK1-206ENST00000557222 C3orf38Q5JPI3 329 aa8.77□□□□□ -1.01
VRK1-206ENST00000557222 DPY19L2P1Q6NXN4 242 aa8.77□□□□□ -1.01
VRK1-206ENST00000557222 SHISA2Q6UWI4 295 aa8.77□□□□□ -1.01
VRK1-206ENST00000557222 MACC1Q6ZN28 852 aa8.77□□□□□ -1.01
VRK1-206ENST00000557222 NLRP14Q86W24 1093 aa8.77□□□□□ -1.01
VRK1-206ENST00000557222 CREBRFQ8IUR6 639 aa8.77□□□□□ -1.01
VRK1-206ENST00000557222 PHACTR4Q8IZ21 702 aa8.77□□□□□ -1.01
VRK1-206ENST00000557222 ATXN7L3BQ96GX2 97 aa8.77□□□□□ -1.01
VRK1-206ENST00000557222 NSUN5Q96P11 429 aaKnown RBP8.77□□□□□ -1.01
VRK1-206ENST00000557222 NAA15Q9BXJ9 866 aaKnown RBP8.77□□□□□ -1.01
VRK1-206ENST00000557222 SLC13A1Q9BZW2 595 aa8.77□□□□□ -1.01
VRK1-206ENST00000557222 NDST4Q9H3R1 872 aa8.77□□□□□ -1.01
VRK1-206ENST00000557222 ZDHHC6Q9H6R6 413 aa8.77□□□□□ -1.01
VRK1-206ENST00000557222 TPSG1Q9NRR2 321 aa8.77□□□□□ -1.01
VRK1-206ENST00000557222 APOBEC3BQ9UH17 382 aaKnown RBP8.77□□□□□ -1.01
VRK1-206ENST00000557222 ACSL6Q9UKU0 697 aa8.77□□□□□ -1.01
VRK1-206ENST00000557222 PADI4Q9UM07 663 aa8.77□□□□□ -1.01
VRK1-206ENST00000557222 PCDHGA7Q9Y5G6 932 aa8.77□□□□□ -1.01
VRK1-206ENST00000557222 A0A1W2PNU3 283 aaPredicted RBP8.76□□□□□ -1.01
VRK1-206ENST00000557222 MUSKO15146 869 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 YY2O15391 372 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 KDELR3O43731 214 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 GCATO75600 419 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 TM7SF2O76062 418 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 ALPIP09923 528 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 MYF5P13349 255 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 ACVRL1P37023 503 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 PTPN9P43378 593 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 ADKP55263 362 aaKnown RBP8.76□□□□□ -1.01
VRK1-206ENST00000557222 PPARDQ03181 441 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 ELP6Q0PNE2 266 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 SPIDRQ14159 915 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 GRM3Q14832 879 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 TPD52L1Q16890 204 aaPredicted RBP8.76□□□□□ -1.01
VRK1-206ENST00000557222 KIF26BQ2KJY2 2108 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 VWA3BQ502W6 1294 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 FAXCQ5TGI0 409 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 KLHDC7AQ5VTJ3 777 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 GDPD4Q6W3E5 623 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 CCDC81Q6ZN84 652 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 STRADAQ7RTN6 431 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 TTC7BQ86TV6 843 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 FAM131BQ86XD5 332 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 WFDC8Q8IUA0 241 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 SLC35F3Q8IY50 421 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 DRC7Q8IY82 874 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms