RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 APCP25054 2843 aa12.88□□□□□ -0.35
PSEN1-219ENST00000556951 MED13LQ71F56 2210 aa12.88□□□□□ -0.35
PSEN1-219ENST00000556951 CCDC187A0A096LP49 1063 aa12.87□□□□□ -0.35
PSEN1-219ENST00000556951 C1QTNF3-AMACRE9PGA6 284 aa12.87□□□□□ -0.35
PSEN1-219ENST00000556951 NTN3O00634 580 aaPredicted RBP12.87□□□□□ -0.35
PSEN1-219ENST00000556951 ZNF185O15231 689 aa12.87□□□□□ -0.35
PSEN1-219ENST00000556951 SPINT1O43278 529 aa12.87□□□□□ -0.35
PSEN1-219ENST00000556951 FBXO21O94952 628 aa12.87□□□□□ -0.35
PSEN1-219ENST00000556951 ITGA2BP08514 1039 aa12.87□□□□□ -0.35
PSEN1-219ENST00000556951 SRCP12931 536 aa12.87□□□□□ -0.35
PSEN1-219ENST00000556951 SLC5A2P31639 672 aa12.87□□□□□ -0.35
PSEN1-219ENST00000556951 CHRNA3P32297 505 aa12.87□□□□□ -0.35
PSEN1-219ENST00000556951 CXCR5P32302 372 aa12.87□□□□□ -0.35
PSEN1-219ENST00000556951 CTNNA1P35221 906 aaKnown RBP12.87□□□□□ -0.35
PSEN1-219ENST00000556951 PAFAH1B1P43034 410 aa12.87□□□□□ -0.35
PSEN1-219ENST00000556951 PEX5P50542 639 aa12.87□□□□□ -0.35
PSEN1-219ENST00000556951 EIF2B5Q13144 721 aaKnown RBP12.87□□□□□ -0.35
PSEN1-219ENST00000556951 DEFB133Q30KQ1 61 aa12.87□□□□□ -0.35
PSEN1-219ENST00000556951 EFHC1Q5JVL4 640 aa12.87□□□□□ -0.35
PSEN1-219ENST00000556951 FAM102AQ5T9C2 384 aaPredicted RBP12.87□□□□□ -0.35
PSEN1-219ENST00000556951 CCDC181Q5TID7 509 aa12.87□□□□□ -0.35
PSEN1-219ENST00000556951 OLFML1Q6UWY5 402 aa12.87□□□□□ -0.35
PSEN1-219ENST00000556951 BEND5Q7L4P6 421 aa12.87□□□□□ -0.35
PSEN1-219ENST00000556951 ARCQ7LC44 396 aa12.87□□□□□ -0.35
PSEN1-219ENST00000556951 PTRH1Q86Y79 214 aaKnown RBP12.87□□□□□ -0.35
PSEN1-219ENST00000556951 DCP2Q8IU60 420 aaKnown RBP12.87□□□□□ -0.35
PSEN1-219ENST00000556951 PIAS4Q8N2W9 510 aaPredicted RBP12.87□□□□□ -0.35
PSEN1-219ENST00000556951 TMIEQ8NEW7 156 aa12.87□□□□□ -0.35
PSEN1-219ENST00000556951 OR2A12Q8NGT7 310 aa12.87□□□□□ -0.35
PSEN1-219ENST00000556951 BTN2A3PQ96KV6 586 aa12.87□□□□□ -0.35
PSEN1-219ENST00000556951 CAPZA3Q96KX2 299 aa12.87□□□□□ -0.35
PSEN1-219ENST00000556951 BOCQ9BWV1 1114 aa12.87□□□□□ -0.35
PSEN1-219ENST00000556951 METTL5Q9NRN9 209 aaKnown RBP12.87□□□□□ -0.35
PSEN1-219ENST00000556951 TMEM59LQ9UK28 342 aa12.87□□□□□ -0.35
PSEN1-219ENST00000556951 PNMA8BQ9ULN7 279 aaPredicted RBP12.87□□□□□ -0.35
PSEN1-219ENST00000556951 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.87□□□□□ -0.35
PSEN1-219ENST00000556951 SPG11Q96JI7 2443 aa12.87□□□□□ -0.35
PSEN1-219ENST00000556951 CTAGE15A4D2H0 777 aa12.86□□□□□ -0.35
PSEN1-219ENST00000556951 A6NNZ2 444 aa12.86□□□□□ -0.35
PSEN1-219ENST00000556951 KCNU1A8MYU2 1149 aa12.86□□□□□ -0.35
PSEN1-219ENST00000556951 K7ERQ8 282 aa12.86□□□□□ -0.35
PSEN1-219ENST00000556951 TPP1O14773 563 aa12.86□□□□□ -0.35
PSEN1-219ENST00000556951 AQP9O43315 295 aa12.86□□□□□ -0.35
PSEN1-219ENST00000556951 GCATO75600 419 aa12.86□□□□□ -0.35
PSEN1-219ENST00000556951 TCEA3O75764 348 aa12.86□□□□□ -0.35
PSEN1-219ENST00000556951 PAK4O96013 591 aaPredicted RBP12.86□□□□□ -0.35
PSEN1-219ENST00000556951 CTAGE8P0CG41 777 aa12.86□□□□□ -0.35
PSEN1-219ENST00000556951 WT1P19544 449 aaPredicted RBP12.86□□□□□ -0.35
PSEN1-219ENST00000556951 PSMA2P25787 234 aa12.86□□□□□ -0.35
PSEN1-219ENST00000556951 DNA2P51530 1060 aa12.86□□□□□ -0.35
PSEN1-219ENST00000556951 OGDHQ02218 1023 aa12.86□□□□□ -0.35
PSEN1-219ENST00000556951 LRRC38Q5VT99 294 aa12.86□□□□□ -0.35
PSEN1-219ENST00000556951 FBXL22Q6P050 247 aa12.86□□□□□ -0.35
PSEN1-219ENST00000556951 USP53Q70EK8 1073 aa12.86□□□□□ -0.35
PSEN1-219ENST00000556951 ZNF572Q7Z3I7 529 aaPredicted RBP12.86□□□□□ -0.35
PSEN1-219ENST00000556951 CTAGE6Q86UF2 777 aa12.86□□□□□ -0.35
PSEN1-219ENST00000556951 CTAGE4Q8IX94 777 aa12.86□□□□□ -0.35
PSEN1-219ENST00000556951 RHOT1Q8IXI2 618 aa12.86□□□□□ -0.35
PSEN1-219ENST00000556951 SLC35F3Q8IY50 421 aa12.86□□□□□ -0.35
PSEN1-219ENST00000556951 CHST14Q8NCH0 376 aa12.86□□□□□ -0.35
PSEN1-219ENST00000556951 JOSD2Q8TAC2 188 aa12.86□□□□□ -0.35
PSEN1-219ENST00000556951 FAM174AQ8TBP5 190 aa12.86□□□□□ -0.35
PSEN1-219ENST00000556951 ACTRT1Q8TDG2 376 aa12.86□□□□□ -0.35
PSEN1-219ENST00000556951 SGF29Q96ES7 293 aa12.86□□□□□ -0.35
PSEN1-219ENST00000556951 PSMB7Q99436 277 aa12.86□□□□□ -0.35
PSEN1-219ENST00000556951 KLF6Q99612 283 aaPredicted RBP12.86□□□□□ -0.35
PSEN1-219ENST00000556951 NCAPGQ9BPX3 1015 aa12.86□□□□□ -0.35
PSEN1-219ENST00000556951 CNPY3Q9BT09 278 aa12.86□□□□□ -0.35
PSEN1-219ENST00000556951 SLC17A9Q9BYT1 436 aa12.86□□□□□ -0.35
PSEN1-219ENST00000556951 CARD9Q9H257 536 aa12.86□□□□□ -0.35
PSEN1-219ENST00000556951 TCEAL2Q9H3H9 227 aaPredicted RBP12.86□□□□□ -0.35
PSEN1-219ENST00000556951 EVA1BQ9NVM1 165 aa12.86□□□□□ -0.35
PSEN1-219ENST00000556951 ASNSD1Q9NWL6 643 aa12.86□□□□□ -0.35
PSEN1-219ENST00000556951 GEMIN8Q9NWZ8 242 aaKnown RBP12.86□□□□□ -0.35
PSEN1-219ENST00000556951 ACSL6Q9UKU0 697 aa12.86□□□□□ -0.35
PSEN1-219ENST00000556951 TTC7AQ9ULT0 858 aaPredicted RBP12.86□□□□□ -0.35
PSEN1-219ENST00000556951 PCDHGA7Q9Y5G6 932 aa12.86□□□□□ -0.35
PSEN1-219ENST00000556951 NIPBLQ6KC79 2804 aaeCLIP12.85□□□□□ -0.35
PSEN1-219ENST00000556951 TRPM6Q9BX84 2022 aa12.85□□□□□ -0.35
PSEN1-219ENST00000556951 TCAF2A6NFQ2 919 aa12.85□□□□□ -0.35
PSEN1-219ENST00000556951 C2CD4BA6NLJ0 364 aa12.85□□□□□ -0.35
PSEN1-219ENST00000556951 EFCAB8A8MWE9 144 aa12.85□□□□□ -0.35
PSEN1-219ENST00000556951 F5H5T6 163 aa12.85□□□□□ -0.35
PSEN1-219ENST00000556951 KPNA3O00505 521 aaPredicted RBP12.85□□□□□ -0.35
PSEN1-219ENST00000556951 MUSKO15146 869 aa12.85□□□□□ -0.35
PSEN1-219ENST00000556951 SART1O43290 800 aaKnown RBP12.85□□□□□ -0.35
PSEN1-219ENST00000556951 SMAD6O43541 496 aaKnown RBP12.85□□□□□ -0.35
PSEN1-219ENST00000556951 PSTPIP1O43586 416 aa12.85□□□□□ -0.35
PSEN1-219ENST00000556951 BNIP3LO60238 219 aa12.85□□□□□ -0.35
PSEN1-219ENST00000556951 CEP104O60308 925 aa12.85□□□□□ -0.35
PSEN1-219ENST00000556951 AGFG2O95081 481 aa12.85□□□□□ -0.35
PSEN1-219ENST00000556951 PCDH8O95206 1070 aa12.85□□□□□ -0.35
PSEN1-219ENST00000556951 TRUB2O95900 331 aaKnown RBP12.85□□□□□ -0.35
PSEN1-219ENST00000556951 GLI1P08151 1106 aa12.85□□□□□ -0.35
PSEN1-219ENST00000556951 GPD1P21695 349 aa12.85□□□□□ -0.35
PSEN1-219ENST00000556951 COL8A1P27658 744 aa12.85□□□□□ -0.35
PSEN1-219ENST00000556951 UGT1A5P35504 534 aa12.85□□□□□ -0.35
PSEN1-219ENST00000556951 ZNF143P52747 638 aaPredicted RBP12.85□□□□□ -0.35
PSEN1-219ENST00000556951 RWDD2BP57060 319 aa12.85□□□□□ -0.35
PSEN1-219ENST00000556951 RNASE9P60153 205 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms