RNA–Protein interactions for RNA: ENST00000554534.5

PCNX4-208, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 357 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-208ENST00000554534 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.74□□□□□ -1.33
PCNX4-208ENST00000554534 PAF1Q8N7H5 531 aa6.74□□□□□ -1.33
PCNX4-208ENST00000554534 DENND6BQ8NEG7 585 aa6.74□□□□□ -1.33
PCNX4-208ENST00000554534 FAM174AQ8TBP5 190 aa6.74□□□□□ -1.33
PCNX4-208ENST00000554534 FAM172AQ8WUF8 416 aa6.74□□□□□ -1.33
PCNX4-208ENST00000554534 ASB12Q8WXK4 309 aa6.74□□□□□ -1.33
PCNX4-208ENST00000554534 NKD1Q969G9 470 aa6.74□□□□□ -1.33
PCNX4-208ENST00000554534 RAB7BQ96AH8 199 aa6.74□□□□□ -1.33
PCNX4-208ENST00000554534 ISG20Q96AZ6 181 aaKnown RBP6.74□□□□□ -1.33
PCNX4-208ENST00000554534 TBC1D31Q96DN5 1066 aa6.74□□□□□ -1.33
PCNX4-208ENST00000554534 PGAP3Q96FM1 320 aaPredicted RBP6.74□□□□□ -1.33
PCNX4-208ENST00000554534 CCDC74BQ96LY2 380 aa6.74□□□□□ -1.33
PCNX4-208ENST00000554534 WDR92Q96MX6 357 aa6.74□□□□□ -1.33
PCNX4-208ENST00000554534 GDAP1L1Q96MZ0 367 aa6.74□□□□□ -1.33
PCNX4-208ENST00000554534 TMEM74Q96NL1 305 aa6.74□□□□□ -1.33
PCNX4-208ENST00000554534 SLC12A9Q9BXP2 914 aa6.74□□□□□ -1.33
PCNX4-208ENST00000554534 SUV39H2Q9H5I1 410 aa6.74□□□□□ -1.33
PCNX4-208ENST00000554534 TMEM248Q9NWD8 314 aa6.74□□□□□ -1.33
PCNX4-208ENST00000554534 HOOK1Q9UJC3 728 aaKnown RBP6.74□□□□□ -1.33
PCNX4-208ENST00000554534 TMEM98Q9Y2Y6 226 aa6.74□□□□□ -1.33
PCNX4-208ENST00000554534 PCDHB11Q9Y5F2 797 aa6.74□□□□□ -1.33
PCNX4-208ENST00000554534 PCDHGA7Q9Y5G6 932 aa6.74□□□□□ -1.33
PCNX4-208ENST00000554534 B3GALT1Q9Y5Z6 326 aa6.74□□□□□ -1.33
PCNX4-208ENST00000554534 TNRC6AQ8NDV7 1962 aaKnown RBP6.74□□□□□ -1.33
PCNX4-208ENST00000554534 PRRC2CQ9Y520 2896 aaKnown RBP6.74□□□□□ -1.33
PCNX4-208ENST00000554534 SPENQ96T58 3664 aaKnown RBP6.73□□□□□ -1.33
PCNX4-208ENST00000554534 USP9YO00507 2555 aaPredicted RBP6.73□□□□□ -1.33
PCNX4-208ENST00000554534 IGHV5-10-1A0A0J9YXX1 117 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 BLACEA4D250 179 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 GOLGA6CA6NDK9 693 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 GOLGA6BA6NDN3 693 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 PPM1DO15297 605 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 PPFIA2O75334 1257 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 RECQL5O94762 991 aaPredicted RBP6.73□□□□□ -1.33
PCNX4-208ENST00000554534 ECEL1O95672 775 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 FGF1P05230 155 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 GOLGA6DP0CG33 693 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 TNFAIP3P21580 790 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 CD1CP29017 333 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 EPHB2P29323 1055 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 CCKBRP32239 447 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 GNPDA1P46926 289 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 MLLT10P55197 1068 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 POLE2P56282 527 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 NOMO3P69849 1222 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 RALGDSQ12967 914 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 HLTFQ14527 1009 aaKnown RBP eCLIP6.73□□□□□ -1.33
PCNX4-208ENST00000554534 ACOX1Q15067 660 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 CA9Q16790 459 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 UGP2Q16851 508 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 TPD52L1Q16890 204 aaPredicted RBP6.73□□□□□ -1.33
PCNX4-208ENST00000554534 DEFB109BQ30KR1 87 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 C14orf28Q4W4Y0 310 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 VWA3BQ502W6 1294 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 MIIPQ5JXC2 388 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 CERCAMQ5T4B2 595 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 KLHDC7AQ5VTJ3 777 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 C16orf46Q6P387 395 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 WDR59Q6PJI9 974 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 OGFOD3Q6PK18 319 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 SLC30A9Q6PML9 568 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 ZNF783Q6ZMS7 281 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 MARK2Q7KZI7 788 aaKnown RBP6.73□□□□□ -1.33
PCNX4-208ENST00000554534 SRLQ86TD4 932 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 TRIM74Q86UV6 250 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 DTX1Q86Y01 620 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 SLITRK4Q8IW52 837 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 NRSN1Q8IZ57 195 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 FSTL5Q8N475 847 aaPredicted RBP6.73□□□□□ -1.33
PCNX4-208ENST00000554534 IL22RA1Q8N6P7 574 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 ZSCAN1Q8NBB4 408 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 TSEN2Q8NCE0 465 aaKnown RBP6.73□□□□□ -1.33
PCNX4-208ENST00000554534 ZDHHC1Q8WTX9 485 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 ART4Q93070 314 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 GRAMD1AQ96CP6 724 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 RBM15Q96T37 977 aaKnown RBP eCLIP6.73□□□□□ -1.33
PCNX4-208ENST00000554534 SLC39A8Q9C0K1 460 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 SLC25A18Q9H1K4 315 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 MAGEH1Q9H213 219 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 NDST4Q9H3R1 872 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 CARS2Q9HA77 564 aaKnown RBP6.73□□□□□ -1.33
PCNX4-208ENST00000554534 NLRC4Q9NPP4 1024 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 SAMSN1Q9NSI8 373 aaKnown RBP6.73□□□□□ -1.33
PCNX4-208ENST00000554534 GOLGA6AQ9NYA3 693 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 TAB2Q9NYJ8 693 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 RRN3Q9NYV6 651 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 SEPT10Q9P0V9 454 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 PPARGC1AQ9UBK2 798 aaKnown RBP6.73□□□□□ -1.33
PCNX4-208ENST00000554534 KLHL3Q9UH77 587 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 CD84Q9UIB8 345 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 RWDD2AQ9UIY3 292 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 PRKAB1Q9Y478 270 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 MFHAS1Q9Y4C4 1052 aa6.73□□□□□ -1.33
PCNX4-208ENST00000554534 MRPS18BQ9Y676 258 aaKnown RBP6.73□□□□□ -1.33
PCNX4-208ENST00000554534 USP9XQ93008 2570 aaPredicted RBP6.73□□□□□ -1.33
PCNX4-208ENST00000554534 LOC101059948A0A1B0GTJ6 334 aa6.72□□□□□ -1.33
PCNX4-208ENST00000554534 C2CD4BA6NLJ0 364 aa6.72□□□□□ -1.33
PCNX4-208ENST00000554534 EFCAB7A8K855 629 aa6.72□□□□□ -1.33
PCNX4-208ENST00000554534 RHPN2P1A8MT19 583 aa6.72□□□□□ -1.33
PCNX4-208ENST00000554534 EPHB6O15197 1021 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms