RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 LZTS1Q9Y250 596 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 PCDHA10Q9Y5I2 948 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 COMMD3-BMI1R4GMX3 469 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 CACNA1HO95180 2353 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 TTC3P53804 2025 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 PLXNA3P51805 1871 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 DOCK5Q9H7D0 1870 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 SMIM31A0A1B0GVY4 71 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 DPPA5A6NC42 116 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 RRN3P2A6NIE6 340 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 SPECC1L-ADORA2AF8WAN1 911 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 SGK1O00141 431 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 PEX1O43933 1283 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 KRT38O76015 456 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 TM7SF2O76062 418 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 FGF18O76093 207 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 RTN3O95197 1032 aaPredicted RBP6.03□□□□□ -1.44
VPS33B-203ENST00000554264 KLHL2O95198 593 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 INHBAP08476 426 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 LINGO3P0C6S8 592 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 ARP10275 920 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 PIM1P11309 404 aaPredicted RBP6.03□□□□□ -1.44
VPS33B-203ENST00000554264 CCDC130P13994 396 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 CREB1P16220 341 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 LAG3P18627 525 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 SP100P23497 879 aaPredicted RBP6.03□□□□□ -1.44
VPS33B-203ENST00000554264 ACAT1P24752 427 aaKnown RBP6.03□□□□□ -1.44
VPS33B-203ENST00000554264 GCAP28676 217 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 EPHB2P29323 1055 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 TCF7P36402 384 aaPredicted RBP6.03□□□□□ -1.44
VPS33B-203ENST00000554264 CDKN2BP42772 138 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 LIG4P49917 911 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 NEK3P51956 506 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 ZNF132P52740 706 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 SNX16P57768 344 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 SP4Q02446 784 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 WASHC5Q12768 1159 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 TUSC3Q13454 348 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 CUL3Q13618 768 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 ITGA9Q13797 1035 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 KCNC3Q14003 757 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 PRKD1Q15139 912 aaPredicted RBP6.03□□□□□ -1.44
VPS33B-203ENST00000554264 RCN1Q15293 331 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 MARCH8Q5T0T0 291 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 TRIM68Q6AZZ1 485 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 ZNF449Q6P9G9 518 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 DCUN1D2Q6PH85 259 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 SYCE2Q6PIF2 218 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 CYS1Q717R9 158 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 RTN4RL1Q86UN2 441 aaPredicted RBP6.03□□□□□ -1.44
VPS33B-203ENST00000554264 SLC26A11Q86WA9 606 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 NAT8LQ8N9F0 302 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 COLGALT1Q8NBJ5 622 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 CATSPER1Q8NEC5 780 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 VN1R2Q8NFZ6 395 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 TCP10LQ8TDR4 215 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 ACMSDQ8TDX5 336 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 SLC44A1Q8WWI5 657 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 SEPT1Q8WYJ6 367 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 CASP10Q92851 521 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 ATP2A3Q93084 1043 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 OXNAD1Q96HP4 312 aaPredicted RBP6.03□□□□□ -1.44
VPS33B-203ENST00000554264 MAGEB10Q96LZ2 347 aaPredicted RBP6.03□□□□□ -1.44
VPS33B-203ENST00000554264 FAM210AQ96ND0 272 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 YIPF3Q9GZM5 350 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 S1PR5Q9H228 398 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 LHX5Q9H2C1 402 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 SMARCAD1Q9H4L7 1026 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 Q9H521 79 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 AGO3Q9H9G7 860 aaKnown RBP6.03□□□□□ -1.44
VPS33B-203ENST00000554264 RSAD1Q9HA92 442 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 KIF9Q9HAQ2 790 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 IFT122Q9HBG6 1241 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 NGRNQ9NPE2 291 aaKnown RBP6.03□□□□□ -1.44
VPS33B-203ENST00000554264 ARHGAP28Q9P2N2 729 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 WRAP73Q9P2S5 460 aaPredicted RBP6.03□□□□□ -1.44
VPS33B-203ENST00000554264 TAGLN3Q9UI15 199 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 DSEQ9UL01 958 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 PADI3Q9ULW8 664 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 R3HDM2Q9Y2K5 976 aaKnown RBP6.03□□□□□ -1.44
VPS33B-203ENST00000554264 COQ6Q9Y2Z9 468 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 PCDHB7Q9Y5E2 793 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 TRPV2Q9Y5S1 764 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 PTPRZ1P23471 2315 aaPredicted RBP6.03□□□□□ -1.44
VPS33B-203ENST00000554264 USP34Q70CQ2 3546 aa6.03□□□□□ -1.44
VPS33B-203ENST00000554264 ZFHX2Q9C0A1 2572 aaPredicted RBP6.03□□□□□ -1.44
VPS33B-203ENST00000554264 CFAP54Q96N23 3096 aa6.02□□□□□ -1.45
VPS33B-203ENST00000554264 A0A1B0GTL3 188 aa6.02□□□□□ -1.45
VPS33B-203ENST00000554264 SIGLEC16A6NMB1 481 aa6.02□□□□□ -1.45
VPS33B-203ENST00000554264 TBKBP1A7MCY6 615 aa6.02□□□□□ -1.45
VPS33B-203ENST00000554264 A8MUI8 341 aa6.02□□□□□ -1.45
VPS33B-203ENST00000554264 C2CD4DB7Z1M9 353 aa6.02□□□□□ -1.45
VPS33B-203ENST00000554264 ZNF561-AS1K7EIQ3 104 aa6.02□□□□□ -1.45
VPS33B-203ENST00000554264 APOC4-APOC2K7ER74 178 aa6.02□□□□□ -1.45
VPS33B-203ENST00000554264 ACOT7O00154 380 aa6.02□□□□□ -1.45
VPS33B-203ENST00000554264 COPEO14579 308 aa6.02□□□□□ -1.45
VPS33B-203ENST00000554264 CAPN9O14815 690 aa6.02□□□□□ -1.45
VPS33B-203ENST00000554264 MCF2LO15068 1137 aa6.02□□□□□ -1.45
VPS33B-203ENST00000554264 SLC22A2O15244 555 aa6.02□□□□□ -1.45
VPS33B-203ENST00000554264 FAM189A1O60320 539 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms