RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 CLCN5P51795 746 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 NEK3P51956 506 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 PTPN5P54829 565 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 TRAF2Q12933 501 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 GALNT3Q14435 633 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 CBX2Q14781 532 aaPredicted RBP12.63□□□□□ -0.39
CACNB3-217ENST00000550483 CNGA3Q16281 694 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 TAF1BQ53T94 588 aaPredicted RBP12.63□□□□□ -0.39
CACNB3-217ENST00000550483 CARD16Q5EG05 197 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 AARS2Q5JTZ9 985 aaKnown RBP12.63□□□□□ -0.39
CACNB3-217ENST00000550483 RNF187Q5TA31 235 aaPredicted RBP12.63□□□□□ -0.39
CACNB3-217ENST00000550483 MROH9Q5TGP6 573 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 ZDHHC20Q5W0Z9 365 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 MBLAC2Q68D91 279 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 SYCE2Q6PIF2 218 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 AFTPHQ6ULP2 937 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 CES3Q6UWW8 571 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 SH2D5Q6ZV89 423 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 NUDT18Q6ZVK8 323 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 GET4Q7L5D6 327 aaPredicted RBP12.63□□□□□ -0.39
CACNB3-217ENST00000550483 KDELC2Q7Z4H8 507 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 SDCCAG8Q86SQ7 713 aaPredicted RBP12.63□□□□□ -0.39
CACNB3-217ENST00000550483 ANKRD42Q8N9B4 389 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 LPCAT1Q8NF37 534 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 RAB3IL1Q8TBN0 382 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 BLOC1S5Q8TDH9 187 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 HCAR2Q8TDS4 363 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 CKAP2Q8WWK9 683 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 ELSPBP1Q96BH3 223 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 TSPAN17Q96FV3 270 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 EXOC2Q96KP1 924 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 TSNARE1Q96NA8 513 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 TCF12Q99081 682 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 GPR22Q99680 433 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 MCMBPQ9BTE3 642 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 OSBPL1AQ9BXW6 950 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 VPS11Q9H270 941 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 IGFLR1Q9H665 355 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 NLE1Q9NVX2 485 aaPredicted RBP12.63□□□□□ -0.39
CACNB3-217ENST00000550483 GRID1Q9ULK0 1009 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 CHKBQ9Y259 395 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 MYO18AQ92614 2054 aaKnown RBP12.63□□□□□ -0.39
CACNB3-217ENST00000550483 H7C0S8 307 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 PRLP01236 227 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 APOA4P06727 396 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 PYGBP11216 843 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 POU3F3P20264 500 aaPredicted RBP12.62□□□□□ -0.39
CACNB3-217ENST00000550483 CRABP2P29373 138 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 TYK2P29597 1187 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 PPARGP37231 505 aaPredicted RBP12.62□□□□□ -0.39
CACNB3-217ENST00000550483 LEPRP48357 1165 aaKnown RBP12.62□□□□□ -0.39
CACNB3-217ENST00000550483 KPNA2P52292 529 aaKnown RBP12.62□□□□□ -0.39
CACNB3-217ENST00000550483 ZNF140P52738 457 aaPredicted RBP12.62□□□□□ -0.39
CACNB3-217ENST00000550483 ST8SIA6P61647 398 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 POLR2LP62875 67 aaKnown RBP12.62□□□□□ -0.39
CACNB3-217ENST00000550483 POU4F1Q01851 419 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 FCHO2Q0JRZ9 810 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 IHHQ14623 411 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 PDK4Q16654 411 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 QPCTQ16769 361 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 MYLK3Q32MK0 819 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 ZNF470Q6ECI4 717 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 GRAMD4Q6IC98 578 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 MTSS1LQ765P7 747 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 ADIPOR2Q86V24 386 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 TAX1BP1Q86VP1 789 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 ZC3HC1Q86WB0 502 aaKnown RBP12.62□□□□□ -0.39
CACNB3-217ENST00000550483 SPATS2Q86XZ4 545 aaKnown RBP12.62□□□□□ -0.39
CACNB3-217ENST00000550483 MFSD6LQ8IWD5 586 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 YAF2Q8IY57 180 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 OR13J1Q8NGT2 312 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 MDM1Q8TC05 714 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 GRAMD1AQ96CP6 724 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 VPS39Q96JC1 886 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 SERAC1Q96JX3 654 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 LYSMD1Q96S90 227 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 FAM83CQ9BQN1 747 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 LINC00597Q9H2U6 94 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 INTS10Q9NVR2 710 aaKnown RBP12.62□□□□□ -0.39
CACNB3-217ENST00000550483 FBXO5Q9UKT4 447 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 CLEC4EQ9ULY5 219 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 PHTF1Q9UMS5 762 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 ERVW-1Q9UQF0 538 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 PKP3Q9Y446 797 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 PCDHGC4Q9Y5F7 938 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 NOTCH4Q99466 2003 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 CFAP54Q96N23 3096 aa12.62□□□□□ -0.39
CACNB3-217ENST00000550483 TRAFD1O14545 582 aaPredicted RBP12.61□□□□□ -0.39
CACNB3-217ENST00000550483 NDUFAB1O14561 156 aa12.61□□□□□ -0.39
CACNB3-217ENST00000550483 SPAG7O75391 227 aa12.61□□□□□ -0.39
CACNB3-217ENST00000550483 ECI2O75521 394 aa12.61□□□□□ -0.39
CACNB3-217ENST00000550483 MT-CO1P00395 513 aa12.61□□□□□ -0.39
CACNB3-217ENST00000550483 DLDP09622 509 aaKnown RBP12.61□□□□□ -0.39
CACNB3-217ENST00000550483 ARNTP27540 789 aa12.61□□□□□ -0.39
CACNB3-217ENST00000550483 RPA3P35244 121 aaPredicted RBP12.61□□□□□ -0.39
CACNB3-217ENST00000550483 HMGCLP35914 325 aa12.61□□□□□ -0.39
CACNB3-217ENST00000550483 SLC12A2P55011 1212 aa12.61□□□□□ -0.39
CACNB3-217ENST00000550483 BMPR2Q13873 1038 aa12.61□□□□□ -0.39
CACNB3-217ENST00000550483 CCDC153Q494R4 210 aa12.61□□□□□ -0.39
CACNB3-217ENST00000550483 FSTL4Q6MZW2 842 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms