RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 WRAP53Q9BUR4 548 aaKnown RBP16.36■□□□□ 0.21
LIMS2-217ENST00000545738 TUBB2BQ9BVA1 445 aa16.36■□□□□ 0.21
LIMS2-217ENST00000545738 FSD1LQ9BXM9 530 aa16.36■□□□□ 0.21
LIMS2-217ENST00000545738 PLXNA2O75051 1894 aa16.35■□□□□ 0.21
LIMS2-217ENST00000545738 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.35■□□□□ 0.21
LIMS2-217ENST00000545738 CAPN8A6NHC0 703 aa16.35■□□□□ 0.21
LIMS2-217ENST00000545738 SLC7A4O43246 635 aa16.35■□□□□ 0.21
LIMS2-217ENST00000545738 RPP40O75818 363 aaKnown RBP16.35■□□□□ 0.21
LIMS2-217ENST00000545738 ACTN2P35609 894 aa16.35■□□□□ 0.21
LIMS2-217ENST00000545738 FAM193AP78312 1265 aa16.35■□□□□ 0.21
LIMS2-217ENST00000545738 DHX34Q14147 1143 aaKnown RBP16.35■□□□□ 0.21
LIMS2-217ENST00000545738 DNTTIP2Q5QJE6 756 aaKnown RBP16.35■□□□□ 0.21
LIMS2-217ENST00000545738 KDM7AQ6ZMT4 941 aa16.35■□□□□ 0.21
LIMS2-217ENST00000545738 RFLNAQ6ZTI6 216 aa16.35■□□□□ 0.21
LIMS2-217ENST00000545738 TMEFF1Q8IYR6 380 aa16.35■□□□□ 0.21
LIMS2-217ENST00000545738 RMDN1Q96DB5 314 aa16.35■□□□□ 0.21
LIMS2-217ENST00000545738 IFT43Q96FT9 208 aa16.35■□□□□ 0.21
LIMS2-217ENST00000545738 ORAI3Q9BRQ5 295 aa16.35■□□□□ 0.21
LIMS2-217ENST00000545738 FAM126AQ9BYI3 521 aaPredicted RBP16.35■□□□□ 0.21
LIMS2-217ENST00000545738 TRIM31Q9BZY9 425 aa16.35■□□□□ 0.21
LIMS2-217ENST00000545738 SGK2Q9HBY8 427 aa16.35■□□□□ 0.21
LIMS2-217ENST00000545738 NCKAP1Q9Y2A7 1128 aa16.35■□□□□ 0.21
LIMS2-217ENST00000545738 COQ6Q9Y2Z9 468 aa16.35■□□□□ 0.21
LIMS2-217ENST00000545738 GOLGA8CPA6NN73 597 aa16.34■□□□□ 0.21
LIMS2-217ENST00000545738 AP1G1O43747 822 aa16.34■□□□□ 0.21
LIMS2-217ENST00000545738 SUN1O94901 812 aa16.34■□□□□ 0.21
LIMS2-217ENST00000545738 EPOP01588 193 aa16.34■□□□□ 0.21
LIMS2-217ENST00000545738 PTGER3P43115 390 aa16.34■□□□□ 0.21
LIMS2-217ENST00000545738 MAGEA6P43360 314 aa16.34■□□□□ 0.21
LIMS2-217ENST00000545738 GRIA4P48058 902 aa16.34■□□□□ 0.21
LIMS2-217ENST00000545738 SLC7A5Q01650 507 aa16.34■□□□□ 0.21
LIMS2-217ENST00000545738 PRPSAP1Q14558 356 aa16.34■□□□□ 0.21
LIMS2-217ENST00000545738 CNGA3Q16281 694 aa16.34■□□□□ 0.21
LIMS2-217ENST00000545738 TMEM259Q4ZIN3 620 aa16.34■□□□□ 0.21
LIMS2-217ENST00000545738 RNASEH2BQ5TBB1 312 aaKnown RBP16.34■□□□□ 0.21
LIMS2-217ENST00000545738 CRTC1Q6UUV9 634 aa16.34■□□□□ 0.21
LIMS2-217ENST00000545738 DPPA4Q7L190 304 aa16.34■□□□□ 0.21
LIMS2-217ENST00000545738 OR52K1Q8NGK4 314 aa16.34■□□□□ 0.21
LIMS2-217ENST00000545738 KLK6Q92876 244 aa16.34■□□□□ 0.21
LIMS2-217ENST00000545738 DUSP15Q9H1R2 295 aaPredicted RBP16.34■□□□□ 0.21
LIMS2-217ENST00000545738 ASIC3Q9UHC3 531 aa16.34■□□□□ 0.21
LIMS2-217ENST00000545738 SHOC2Q9UQ13 582 aa16.34■□□□□ 0.21
LIMS2-217ENST00000545738 ARIH1Q9Y4X5 557 aaPredicted RBP16.34■□□□□ 0.21
LIMS2-217ENST00000545738 TBC1D3DA0A087WVF3 549 aa16.33■□□□□ 0.21
LIMS2-217ENST00000545738 TBC1D3IA0A087WXS9 549 aa16.33■□□□□ 0.21
LIMS2-217ENST00000545738 TBC1D3EA0A087X179 549 aa16.33■□□□□ 0.21
LIMS2-217ENST00000545738 TBC1D3KA0A087X1G2 549 aa16.33■□□□□ 0.21
LIMS2-217ENST00000545738 CTAGE15A4D2H0 777 aa16.33■□□□□ 0.21
LIMS2-217ENST00000545738 TBC1D3FA6NER0 549 aaPredicted RBP16.33■□□□□ 0.21
LIMS2-217ENST00000545738 TBC1D3LB9A6J9 549 aa16.33■□□□□ 0.21
LIMS2-217ENST00000545738 MMP20O60882 483 aa16.33■□□□□ 0.21
LIMS2-217ENST00000545738 TBC1D3HP0C7X1 549 aa16.33■□□□□ 0.21
LIMS2-217ENST00000545738 CTAGE8P0CG41 777 aa16.33■□□□□ 0.21
LIMS2-217ENST00000545738 TPH1P17752 444 aa16.33■□□□□ 0.21
LIMS2-217ENST00000545738 MAT2AP31153 395 aaKnown RBP16.33■□□□□ 0.21
LIMS2-217ENST00000545738 RPL21P46778 160 aaKnown RBP16.33■□□□□ 0.21
LIMS2-217ENST00000545738 EPHB1P54762 984 aa16.33■□□□□ 0.21
LIMS2-217ENST00000545738 RPL26P61254 145 aaKnown RBP16.33■□□□□ 0.21
LIMS2-217ENST00000545738 RPL6Q02878 288 aaKnown RBP16.33■□□□□ 0.21
LIMS2-217ENST00000545738 LRRC66Q68CR7 880 aa16.33■□□□□ 0.21
LIMS2-217ENST00000545738 TBC1D3GQ6DHY5 549 aa16.33■□□□□ 0.21
LIMS2-217ENST00000545738 TBC1D3CQ6IPX1 549 aa16.33■□□□□ 0.21
LIMS2-217ENST00000545738 LIPIQ6XZB0 460 aa16.33■□□□□ 0.21
LIMS2-217ENST00000545738 LYSMD3Q7Z3D4 306 aa16.33■□□□□ 0.21
LIMS2-217ENST00000545738 CTAGE6Q86UF2 777 aa16.33■□□□□ 0.21
LIMS2-217ENST00000545738 CTAGE4Q8IX94 777 aa16.33■□□□□ 0.21
LIMS2-217ENST00000545738 TBC1D3Q8IZP1 549 aaPredicted RBP16.33■□□□□ 0.21
LIMS2-217ENST00000545738 AGGF1Q8N302 714 aaeCLIP16.33■□□□□ 0.21
LIMS2-217ENST00000545738 CBARPQ8N350 705 aaPredicted RBP16.33■□□□□ 0.21
LIMS2-217ENST00000545738 MMGT1Q8N4V1 131 aa16.33■□□□□ 0.21
LIMS2-217ENST00000545738 PAF1Q8N7H5 531 aa16.33■□□□□ 0.21
LIMS2-217ENST00000545738 NAT8LQ8N9F0 302 aa16.33■□□□□ 0.21
LIMS2-217ENST00000545738 OR2T34Q8NGX1 318 aa16.33■□□□□ 0.21
LIMS2-217ENST00000545738 RAB7BQ96AH8 199 aa16.33■□□□□ 0.21
LIMS2-217ENST00000545738 BIRC7Q96CA5 298 aa16.33■□□□□ 0.21
LIMS2-217ENST00000545738 LYSMD1Q96S90 227 aa16.33■□□□□ 0.21
LIMS2-217ENST00000545738 LRRC40Q9H9A6 602 aa16.33■□□□□ 0.21
LIMS2-217ENST00000545738 ARNT2Q9HBZ2 717 aa16.33■□□□□ 0.21
LIMS2-217ENST00000545738 RAPGEFL1Q9UHV5 662 aa16.33■□□□□ 0.21
LIMS2-217ENST00000545738 FEZ2Q9UHY8 353 aaPredicted RBP16.33■□□□□ 0.21
LIMS2-217ENST00000545738 RPL26L1Q9UNX3 145 aaKnown RBP16.33■□□□□ 0.21
LIMS2-217ENST00000545738 PCDHGA2Q9Y5H1 932 aa16.33■□□□□ 0.21
LIMS2-217ENST00000545738 A0A1W2PQU0 124 aa16.33■□□□□ 0.2
LIMS2-217ENST00000545738 IGLON5A6NGN9 336 aa16.33■□□□□ 0.2
LIMS2-217ENST00000545738 DNALI1O14645 258 aaPredicted RBP16.33■□□□□ 0.2
LIMS2-217ENST00000545738 RNGTTO60942 597 aaKnown RBP16.33■□□□□ 0.2
LIMS2-217ENST00000545738 AVILO75366 819 aa16.33■□□□□ 0.2
LIMS2-217ENST00000545738 PCDH8O95206 1070 aa16.33■□□□□ 0.2
LIMS2-217ENST00000545738 CLDN7O95471 211 aa16.33■□□□□ 0.2
LIMS2-217ENST00000545738 OXTRP30559 389 aa16.33■□□□□ 0.2
LIMS2-217ENST00000545738 ADCY8P40145 1251 aa16.33■□□□□ 0.2
LIMS2-217ENST00000545738 LIG3P49916 1009 aa16.33■□□□□ 0.2
LIMS2-217ENST00000545738 POLR2LP62875 67 aaKnown RBP16.33■□□□□ 0.2
LIMS2-217ENST00000545738 PTSQ03393 145 aa16.33■□□□□ 0.2
LIMS2-217ENST00000545738 ZNF284Q2VY69 593 aa16.33■□□□□ 0.2
LIMS2-217ENST00000545738 PLK5Q496M5 336 aa16.33■□□□□ 0.2
LIMS2-217ENST00000545738 TMEM52BQ4KMG9 183 aa16.33■□□□□ 0.2
LIMS2-217ENST00000545738 ARMCX6Q7L4S7 300 aa16.33■□□□□ 0.2
LIMS2-217ENST00000545738 HSD11B1LQ7Z5J1 315 aa16.33■□□□□ 0.2
LIMS2-217ENST00000545738 PELI3Q8N2H9 469 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms