RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 OXTRP30559 389 aa13.15□□□□□ -0.3
DDX11-227ENST00000544652 RPL21P46778 160 aaKnown RBP13.15□□□□□ -0.3
DDX11-227ENST00000544652 ADPRHP54922 357 aa13.15□□□□□ -0.3
DDX11-227ENST00000544652 MRPS25P82663 173 aaKnown RBP13.15□□□□□ -0.3
DDX11-227ENST00000544652 DMWDQ09019 674 aa13.15□□□□□ -0.3
DDX11-227ENST00000544652 OLIG2Q13516 323 aa13.15□□□□□ -0.3
DDX11-227ENST00000544652 GALNT3Q14435 633 aa13.15□□□□□ -0.3
DDX11-227ENST00000544652 SPARCL1Q14515 664 aa13.15□□□□□ -0.3
DDX11-227ENST00000544652 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.15□□□□□ -0.3
DDX11-227ENST00000544652 ZNF534Q76KX8 674 aa13.15□□□□□ -0.3
DDX11-227ENST00000544652 TTC7BQ86TV6 843 aa13.15□□□□□ -0.3
DDX11-227ENST00000544652 HOOK3Q86VS8 718 aa13.15□□□□□ -0.3
DDX11-227ENST00000544652 PPIL6Q8IXY8 311 aa13.15□□□□□ -0.3
DDX11-227ENST00000544652 NDUFAF2Q8N183 169 aa13.15□□□□□ -0.3
DDX11-227ENST00000544652 MCUQ8NE86 351 aa13.15□□□□□ -0.3
DDX11-227ENST00000544652 LPCAT1Q8NF37 534 aa13.15□□□□□ -0.3
DDX11-227ENST00000544652 SNF8Q96H20 258 aa13.15□□□□□ -0.3
DDX11-227ENST00000544652 PHOX2BQ99453 314 aa13.15□□□□□ -0.3
DDX11-227ENST00000544652 FICDQ9BVA6 458 aa13.15□□□□□ -0.3
DDX11-227ENST00000544652 TMUB1Q9BVT8 246 aa13.15□□□□□ -0.3
DDX11-227ENST00000544652 TPSD1Q9BZJ3 242 aa13.15□□□□□ -0.3
DDX11-227ENST00000544652 SGK2Q9HBY8 427 aa13.15□□□□□ -0.3
DDX11-227ENST00000544652 CASS4Q9NQ75 786 aa13.15□□□□□ -0.3
DDX11-227ENST00000544652 RRAGDQ9NQL2 400 aaPredicted RBP13.15□□□□□ -0.3
DDX11-227ENST00000544652 WSB2Q9NYS7 404 aaPredicted RBP13.15□□□□□ -0.3
DDX11-227ENST00000544652 UTP11Q9Y3A2 253 aaKnown RBP13.15□□□□□ -0.3
DDX11-227ENST00000544652 FADS3Q9Y5Q0 445 aa13.15□□□□□ -0.3
DDX11-227ENST00000544652 IGHV1OR15-9A0A0B4J2B8 117 aa13.14□□□□□ -0.31
DDX11-227ENST00000544652 CAPN8A6NHC0 703 aa13.14□□□□□ -0.31
DDX11-227ENST00000544652 NDC80O14777 642 aa13.14□□□□□ -0.31
DDX11-227ENST00000544652 USP12O75317 370 aa13.14□□□□□ -0.31
DDX11-227ENST00000544652 TMEM63AO94886 807 aa13.14□□□□□ -0.31
DDX11-227ENST00000544652 SLU7O95391 586 aaKnown RBP13.14□□□□□ -0.31
DDX11-227ENST00000544652 ITIH2P19823 946 aa13.14□□□□□ -0.31
DDX11-227ENST00000544652 NFKBIAP25963 317 aa13.14□□□□□ -0.31
DDX11-227ENST00000544652 MMP12P39900 470 aa13.14□□□□□ -0.31
DDX11-227ENST00000544652 CHRNA4P43681 627 aa13.14□□□□□ -0.31
DDX11-227ENST00000544652 PXNP49023 591 aaPredicted RBP13.14□□□□□ -0.31
DDX11-227ENST00000544652 CSTF1Q05048 431 aaKnown RBP13.14□□□□□ -0.31
DDX11-227ENST00000544652 ELP6Q0PNE2 266 aa13.14□□□□□ -0.31
DDX11-227ENST00000544652 RALGDSQ12967 914 aa13.14□□□□□ -0.31
DDX11-227ENST00000544652 CBLBQ13191 982 aa13.14□□□□□ -0.31
DDX11-227ENST00000544652 MORF4L2Q15014 288 aa13.14□□□□□ -0.31
DDX11-227ENST00000544652 CDKN3Q16667 212 aa13.14□□□□□ -0.31
DDX11-227ENST00000544652 TMEM52BQ4KMG9 183 aa13.14□□□□□ -0.31
DDX11-227ENST00000544652 SYCP2LQ5T4T6 812 aa13.14□□□□□ -0.31
DDX11-227ENST00000544652 ANKRD22Q5VYY1 191 aa13.14□□□□□ -0.31
DDX11-227ENST00000544652 IZUMO3Q5VZ72 239 aa13.14□□□□□ -0.31
DDX11-227ENST00000544652 CCDC70Q6NSX1 233 aa13.14□□□□□ -0.31
DDX11-227ENST00000544652 HIBCHQ6NVY1 386 aaPredicted RBP13.14□□□□□ -0.31
DDX11-227ENST00000544652 DPPA4Q7L190 304 aa13.14□□□□□ -0.31
DDX11-227ENST00000544652 KDELC2Q7Z4H8 507 aa13.14□□□□□ -0.31
DDX11-227ENST00000544652 LONP2Q86WA8 852 aa13.14□□□□□ -0.31
DDX11-227ENST00000544652 BBOF1Q8ND07 529 aa13.14□□□□□ -0.31
DDX11-227ENST00000544652 RMDN1Q96DB5 314 aa13.14□□□□□ -0.31
DDX11-227ENST00000544652 SRPK1Q96SB4 655 aaKnown RBP13.14□□□□□ -0.31
DDX11-227ENST00000544652 LRFN3Q9BTN0 628 aa13.14□□□□□ -0.31
DDX11-227ENST00000544652 MAGEE1Q9HCI5 957 aa13.14□□□□□ -0.31
DDX11-227ENST00000544652 PCDH12Q9NPG4 1184 aa13.14□□□□□ -0.31
DDX11-227ENST00000544652 GRHL1Q9NZI5 618 aa13.14□□□□□ -0.31
DDX11-227ENST00000544652 WHRNQ9P202 907 aa13.14□□□□□ -0.31
DDX11-227ENST00000544652 DMGDHQ9UI17 866 aaKnown RBP13.14□□□□□ -0.31
DDX11-227ENST00000544652 TTC28Q96AY4 2481 aa13.14□□□□□ -0.31
DDX11-227ENST00000544652 LRP4O75096 1905 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 NPIPB15A6NHN6 443 aaPredicted RBP13.13□□□□□ -0.31
DDX11-227ENST00000544652 H0Y858 1186 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 AP3B1O00203 1094 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 TSPAN6O43657 245 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 HEXIM1O94992 359 aaKnown RBP13.13□□□□□ -0.31
DDX11-227ENST00000544652 ALPIP09923 528 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 CYP2A6P11509 494 aaPredicted RBP13.13□□□□□ -0.31
DDX11-227ENST00000544652 MLNP12872 115 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 CTPS1P17812 591 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 XPAP23025 273 aaPredicted RBP13.13□□□□□ -0.31
DDX11-227ENST00000544652 CD6P30203 668 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 ACSL1P33121 698 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 HNF1BP35680 557 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 GRIA1P42261 906 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 TNNT3P45378 269 aaPredicted RBP13.13□□□□□ -0.31
DDX11-227ENST00000544652 LMAN1P49257 510 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 FNTBP49356 437 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 EPHB1P54762 984 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 TUBB4BP68371 445 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 SLC7A5Q01650 507 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 CDH17Q12864 832 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 ANGPT1Q15389 498 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 LRRC73Q5JTD7 316 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 ERAP2Q6P179 960 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 NEK5Q6P3R8 708 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 LRRC8BQ6P9F7 803 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 USP45Q70EL2 814 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 RAVER1Q8IY67 606 aaKnown RBP13.13□□□□□ -0.31
DDX11-227ENST00000544652 CBARPQ8N350 705 aaPredicted RBP13.13□□□□□ -0.31
DDX11-227ENST00000544652 SLC25A41Q8N5S1 370 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 FRMD1Q8N878 549 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 OR52K1Q8NGK4 314 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 SMIM14Q96QK8 99 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 APOL2Q9BQE5 337 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 BTBD1Q9H0C5 482 aa13.13□□□□□ -0.31
DDX11-227ENST00000544652 PREBQ9HCU5 417 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms