RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 DPPA4Q7L190 304 aa13.69□□□□□ -0.22
SP140-213ENST00000543928 TRIM69Q86WT6 500 aa13.69□□□□□ -0.22
SP140-213ENST00000543928 HORMAD1Q86X24 394 aa13.69□□□□□ -0.22
SP140-213ENST00000543928 KLHL7Q8IXQ5 586 aa13.69□□□□□ -0.22
SP140-213ENST00000543928 GRK7Q8WTQ7 553 aa13.69□□□□□ -0.22
SP140-213ENST00000543928 SNX19Q92543 992 aa13.69□□□□□ -0.22
SP140-213ENST00000543928 BIRC7Q96CA5 298 aa13.69□□□□□ -0.22
SP140-213ENST00000543928 SCRN2Q96FV2 425 aa13.69□□□□□ -0.22
SP140-213ENST00000543928 MCCC1Q96RQ3 725 aaPredicted RBP13.69□□□□□ -0.22
SP140-213ENST00000543928 WRAP53Q9BUR4 548 aaKnown RBP13.69□□□□□ -0.22
SP140-213ENST00000543928 FICDQ9BVA6 458 aa13.69□□□□□ -0.22
SP140-213ENST00000543928 ETNK1Q9HBU6 452 aa13.69□□□□□ -0.22
SP140-213ENST00000543928 RAB6BQ9NRW1 208 aa13.69□□□□□ -0.22
SP140-213ENST00000543928 GOLGA6AQ9NYA3 693 aa13.69□□□□□ -0.22
SP140-213ENST00000543928 B4GALT6Q9UBX8 382 aa13.69□□□□□ -0.22
SP140-213ENST00000543928 FEZ2Q9UHY8 353 aaPredicted RBP13.69□□□□□ -0.22
SP140-213ENST00000543928 SMG5Q9UPR3 1016 aaKnown RBP13.69□□□□□ -0.22
SP140-213ENST00000543928 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.69□□□□□ -0.22
SP140-213ENST00000543928 PPIL1Q9Y3C6 166 aa13.69□□□□□ -0.22
SP140-213ENST00000543928 TRPM6Q9BX84 2022 aa13.68□□□□□ -0.22
SP140-213ENST00000543928 NPIPB15A6NHN6 443 aaPredicted RBP13.68□□□□□ -0.22
SP140-213ENST00000543928 MMP20O60882 483 aa13.68□□□□□ -0.22
SP140-213ENST00000543928 ECEL1O95672 775 aa13.68□□□□□ -0.22
SP140-213ENST00000543928 GAS8O95995 478 aa13.68□□□□□ -0.22
SP140-213ENST00000543928 AGTP01019 485 aa13.68□□□□□ -0.22
SP140-213ENST00000543928 EPOP01588 193 aa13.68□□□□□ -0.22
SP140-213ENST00000543928 IGHV4-34P06331 123 aa13.68□□□□□ -0.22
SP140-213ENST00000543928 ATXN1LP0C7T5 689 aaKnown RBP13.68□□□□□ -0.22
SP140-213ENST00000543928 CYP2A6P11509 494 aaPredicted RBP13.68□□□□□ -0.22
SP140-213ENST00000543928 VIPR1P32241 457 aa13.68□□□□□ -0.22
SP140-213ENST00000543928 HNF1BP35680 557 aa13.68□□□□□ -0.22
SP140-213ENST00000543928 FDFT1P37268 417 aa13.68□□□□□ -0.22
SP140-213ENST00000543928 CHRNA4P43681 627 aa13.68□□□□□ -0.22
SP140-213ENST00000543928 VPS41P49754 854 aa13.68□□□□□ -0.22
SP140-213ENST00000543928 RPS21P63220 83 aaKnown RBP13.68□□□□□ -0.22
SP140-213ENST00000543928 RALGDSQ12967 914 aa13.68□□□□□ -0.22
SP140-213ENST00000543928 OLIG2Q13516 323 aa13.68□□□□□ -0.22
SP140-213ENST00000543928 SPARCL1Q14515 664 aa13.68□□□□□ -0.22
SP140-213ENST00000543928 TMEM259Q4ZIN3 620 aa13.68□□□□□ -0.22
SP140-213ENST00000543928 SYCP2LQ5T4T6 812 aa13.68□□□□□ -0.22
SP140-213ENST00000543928 LYSMD4Q5XG99 296 aa13.68□□□□□ -0.22
SP140-213ENST00000543928 KIAA1161Q6NSJ0 714 aa13.68□□□□□ -0.22
SP140-213ENST00000543928 CCDC70Q6NSX1 233 aa13.68□□□□□ -0.22
SP140-213ENST00000543928 C4orf22Q6V702 233 aa13.68□□□□□ -0.22
SP140-213ENST00000543928 KLHDC8BQ8IXV7 354 aa13.68□□□□□ -0.22
SP140-213ENST00000543928 SLC25A41Q8N5S1 370 aa13.68□□□□□ -0.22
SP140-213ENST00000543928 PDCD7Q8N8D1 485 aaKnown RBP13.68□□□□□ -0.22
SP140-213ENST00000543928 SPATA4Q8NEY3 305 aa13.68□□□□□ -0.22
SP140-213ENST00000543928 CXorf40AQ8TE69 158 aa13.68□□□□□ -0.22
SP140-213ENST00000543928 KLK6Q92876 244 aa13.68□□□□□ -0.22
SP140-213ENST00000543928 APOL2Q9BQE5 337 aa13.68□□□□□ -0.22
SP140-213ENST00000543928 SEMA4AQ9H3S1 761 aa13.68□□□□□ -0.22
SP140-213ENST00000543928 PCYOX1Q9UHG3 505 aa13.68□□□□□ -0.22
SP140-213ENST00000543928 ZFR2Q9UPR6 939 aaKnown RBP13.68□□□□□ -0.22
SP140-213ENST00000543928 GPR179Q6PRD1 2367 aa13.68□□□□□ -0.22
SP140-213ENST00000543928 IGLON5A6NGN9 336 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 CAPN8A6NHC0 703 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 E7EVH7 732 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 PSMD3O43242 534 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 LATO43561 262 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 USP12O75317 370 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 AP2A1O95782 977 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 HLA-DPA1P20036 260 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 ITPKAP23677 461 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 MAOBP27338 520 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 ADRA1AP35348 466 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 LMAN1P49257 510 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 LIG3P49916 1009 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 BASP1P80723 227 aaKnown RBP13.67□□□□□ -0.22
SP140-213ENST00000543928 CKAP4Q07065 602 aaKnown RBP13.67□□□□□ -0.22
SP140-213ENST00000543928 C2orf54Q08AI8 447 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 SEMA5AQ13591 1074 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 ARHGEF7Q14155 803 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 PPP1R7Q15435 360 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 SLC1A5Q15758 541 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 WHAMMP3Q1A5X7 153 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 ZNF284Q2VY69 593 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 SIRPB2Q5JXA9 342 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 WDR45BQ5MNZ6 344 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 KCTD11Q693B1 232 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 TSPAN33Q86UF1 283 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 RGL4Q8IZJ4 473 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 SUMF1Q8NBK3 374 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 SLCO2A1Q92959 643 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 LRRC45Q96CN5 670 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 RUNDC3BQ96NL0 473 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 KRT12Q99456 494 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 TBL1YQ9BQ87 522 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 LRRC40Q9H9A6 602 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 EBF2Q9HAK2 575 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 EIF2B4Q9UI10 523 aaKnown RBP13.67□□□□□ -0.22
SP140-213ENST00000543928 TPX2Q9ULW0 747 aaKnown RBP13.67□□□□□ -0.22
SP140-213ENST00000543928 NEU2Q9Y3R4 380 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 DOCK9Q9BZ29 2069 aa13.67□□□□□ -0.22
SP140-213ENST00000543928 A0A0U1RQS6 177 aa13.66□□□□□ -0.22
SP140-213ENST00000543928 ERI2A8K979 691 aaKnown RBP13.66□□□□□ -0.22
SP140-213ENST00000543928 ESPNB1AK53 854 aa13.66□□□□□ -0.22
SP140-213ENST00000543928 SLC31A1O15431 190 aa13.66□□□□□ -0.22
SP140-213ENST00000543928 TM7SF2O76062 418 aa13.66□□□□□ -0.22
SP140-213ENST00000543928 HEXIM1O94992 359 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms