RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 HTR1BP28222 390 aa12.73□□□□□ -0.37
SMG8-202ENST00000543872 HNRNPFP52597 415 aaKnown RBP12.73□□□□□ -0.37
SMG8-202ENST00000543872 STX1BP61266 288 aa12.73□□□□□ -0.37
SMG8-202ENST00000543872 CLEC6AQ6EIG7 209 aa12.73□□□□□ -0.37
SMG8-202ENST00000543872 XAF1Q6GPH4 301 aa12.73□□□□□ -0.37
SMG8-202ENST00000543872 CLEC4FQ8N1N0 589 aa12.73□□□□□ -0.37
SMG8-202ENST00000543872 PRMT6Q96LA8 375 aaPredicted RBP12.73□□□□□ -0.37
SMG8-202ENST00000543872 CSPG4P5Q96PW8 444 aa12.73□□□□□ -0.37
SMG8-202ENST00000543872 TRIT1Q9H3H1 467 aaKnown RBP12.73□□□□□ -0.37
SMG8-202ENST00000543872 QPCTLQ9NXS2 382 aa12.73□□□□□ -0.37
SMG8-202ENST00000543872 FEM1BQ9UK73 627 aa12.73□□□□□ -0.37
SMG8-202ENST00000543872 RAD54BQ9Y620 910 aa12.73□□□□□ -0.37
SMG8-202ENST00000543872 ASNA1O43681 348 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 FARP2O94887 1054 aaPredicted RBP12.72□□□□□ -0.37
SMG8-202ENST00000543872 VDRP11473 427 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 PCNAP12004 261 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 YBX3P16989 372 aaKnown RBP eCLIP12.72□□□□□ -0.373e-6■■■■□ 19.7
SMG8-202ENST00000543872 MAGEA12P43365 314 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 AP3M2P53677 418 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 KIAA0408Q6ZU52 694 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 LOXHD1Q8IVV2 1947 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 COLGALT2Q8IYK4 626 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 LGI2Q8N0V4 545 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 TMEM151AQ8N4L1 468 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 TRPV3Q8NET8 790 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 DNAJB14Q8TBM8 379 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 DUS3LQ96G46 650 aaKnown RBP12.72□□□□□ -0.37
SMG8-202ENST00000543872 ZNF486Q96H40 463 aaPredicted RBP12.72□□□□□ -0.37
SMG8-202ENST00000543872 EGLN2Q96KS0 407 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 ACOT9Q9Y305 439 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 TAF4O00268 1085 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 INMTO95050 263 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 CPNE6O95741 557 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 LDLRP01130 860 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 BMP4P12644 408 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 PSMD8P48556 350 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 ECT2LQ008S8 904 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 FAM98CQ17RN3 349 aaKnown RBP12.72□□□□□ -0.37
SMG8-202ENST00000543872 GTF2IRD2BQ6EKJ0 949 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 CCDC81Q6ZN84 652 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 GTF2IRD2Q86UP8 949 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 ADGRG5Q8IZF4 528 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 SDCCAG3Q96C92 435 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 RNF145Q96MT1 663 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 SCUBE2Q9NQ36 999 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 EXD2Q9NVH0 621 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 TSPAN16Q9UKR8 245 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 MTF2Q9Y483 593 aaPredicted RBP12.72□□□□□ -0.37
SMG8-202ENST00000543872 GREB1LQ9C091 1923 aaPredicted RBP12.72□□□□□ -0.37
SMG8-202ENST00000543872 AXIN1O15169 862 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 ABCB7O75027 752 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 MFN2O95140 757 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 EIF2S1P05198 315 aaKnown RBP12.72□□□□□ -0.37
SMG8-202ENST00000543872 CES1P23141 567 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 CAP2P40123 477 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 NAMPTP43490 491 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 GJA9P57773 515 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 BAATQ14032 418 aaPredicted RBP12.72□□□□□ -0.37
SMG8-202ENST00000543872 CRY1Q16526 586 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 CRY2Q49AN0 593 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 CCDC58Q4VC31 144 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 RSBN1Q5VWQ0 802 aaPredicted RBP12.72□□□□□ -0.37
SMG8-202ENST00000543872 STK32CQ86UX6 486 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 ZNF567Q8N184 647 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 ELMOD1Q8N336 334 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 TXNDC5Q8NBS9 432 aaKnown RBP12.72□□□□□ -0.37
SMG8-202ENST00000543872 OR7A2PQ8NGA2 310 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 STYXQ8WUJ0 223 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 DACH2Q96NX9 599 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 KCTD15Q96SI1 283 aaPredicted RBP12.72□□□□□ -0.37
SMG8-202ENST00000543872 CHST12Q9NRB3 414 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 PCDHGA11Q9Y5H2 935 aa12.72□□□□□ -0.37
SMG8-202ENST00000543872 ARPC2O15144 300 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 MFSD11O43934 449 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 POLR2EP19388 210 aaKnown RBP12.71□□□□□ -0.37
SMG8-202ENST00000543872 LEPRP48357 1165 aaKnown RBP12.71□□□□□ -0.37
SMG8-202ENST00000543872 CTBP1Q13363 440 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 LAMC2Q13753 1193 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 VPS72Q15906 364 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 MEP1AQ16819 746 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 GEN1Q17RS7 908 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 XKR3Q5GH77 459 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 MAP1SQ66K74 1059 aaPredicted RBP12.71□□□□□ -0.37
SMG8-202ENST00000543872 FAM131BQ86XD5 332 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 SPARTQ8N0X7 666 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 SCML4Q8N228 414 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 PELI3Q8N2H9 469 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 POC5Q8NA72 575 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 SMG8Q8ND04 991 aaKnown RBP12.71□□□□□ -0.37
SMG8-202ENST00000543872 PORCNQ9H237 461 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 JPH1Q9HDC5 661 aaPredicted RBP12.71□□□□□ -0.37
SMG8-202ENST00000543872 AKIP1Q9NQ31 210 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 PXMP2Q9NR77 195 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 PNMA8BQ9ULN7 279 aaPredicted RBP12.71□□□□□ -0.37
SMG8-202ENST00000543872 SNX5Q9Y5X3 404 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 ILVBLA1L0T0 632 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 ITGB3P05106 788 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 NR3C2P08235 984 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 ARL4AP40617 200 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 NCBP2-AS2Q69YL0 99 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms