RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 ADSLP30566 484 aaPredicted RBP8.05□□□□□ -1.12
PDLIM5-221ENST00000542407 SDC4P31431 198 aa8.05□□□□□ -1.12
PDLIM5-221ENST00000542407 PHBP35232 272 aa8.05□□□□□ -1.12
PDLIM5-221ENST00000542407 CASP2P42575 452 aa8.05□□□□□ -1.12
PDLIM5-221ENST00000542407 ALDH1A3P47895 512 aa8.05□□□□□ -1.12
PDLIM5-221ENST00000542407 IST1P53990 364 aa8.05□□□□□ -1.12
PDLIM5-221ENST00000542407 ATXN1P54253 815 aaKnown RBP8.05□□□□□ -1.12
PDLIM5-221ENST00000542407 DYNLT1P63172 113 aa8.05□□□□□ -1.12
PDLIM5-221ENST00000542407 DAB2P98082 770 aa8.05□□□□□ -1.12
PDLIM5-221ENST00000542407 CSTF3Q12996 717 aaKnown RBP8.05□□□□□ -1.12
PDLIM5-221ENST00000542407 ATP1A4Q13733 1029 aa8.05□□□□□ -1.12
PDLIM5-221ENST00000542407 SSPNQ14714 243 aa8.05□□□□□ -1.12
PDLIM5-221ENST00000542407 C21orf62-AS1Q17RA5 79 aa8.05□□□□□ -1.12
PDLIM5-221ENST00000542407 ZNF423Q2M1K9 1284 aa8.05□□□□□ -1.12
PDLIM5-221ENST00000542407 ITPRIPL1Q6GPH6 555 aa8.05□□□□□ -1.12
PDLIM5-221ENST00000542407 COLGALT2Q8IYK4 626 aa8.05□□□□□ -1.12
PDLIM5-221ENST00000542407 PQLC3Q8N755 202 aa8.05□□□□□ -1.12
PDLIM5-221ENST00000542407 CCNYL1Q8N7R7 359 aa8.05□□□□□ -1.12
PDLIM5-221ENST00000542407 ZMIZ2Q8NF64 920 aa8.05□□□□□ -1.12
PDLIM5-221ENST00000542407 FAM174AQ8TBP5 190 aa8.05□□□□□ -1.12
PDLIM5-221ENST00000542407 NT5C3BQ969T7 300 aa8.05□□□□□ -1.12
PDLIM5-221ENST00000542407 TMIGD2Q96BF3 282 aa8.05□□□□□ -1.12
PDLIM5-221ENST00000542407 MECRQ9BV79 373 aa8.05□□□□□ -1.12
PDLIM5-221ENST00000542407 SNRNP25Q9BV90 132 aaKnown RBP8.05□□□□□ -1.12
PDLIM5-221ENST00000542407 VPS11Q9H270 941 aa8.05□□□□□ -1.12
PDLIM5-221ENST00000542407 C8orf33Q9H7E9 229 aaPredicted RBP8.05□□□□□ -1.12
PDLIM5-221ENST00000542407 MRPL40Q9NQ50 206 aaKnown RBP8.05□□□□□ -1.12
PDLIM5-221ENST00000542407 GPATCH2LQ9NWQ4 482 aa8.05□□□□□ -1.12
PDLIM5-221ENST00000542407 MTMR10Q9NXD2 777 aa8.05□□□□□ -1.12
PDLIM5-221ENST00000542407 NLRC5Q86WI3 1866 aa8.05□□□□□ -1.12
PDLIM5-221ENST00000542407 PATJQ8NI35 1801 aa8.05□□□□□ -1.12
PDLIM5-221ENST00000542407 A0A1B0GTW7 788 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 ZNF487B1APH4 448 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 HHLA1C9JL84 531 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 M0QZQ0 153 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 DNALI1O14645 258 aaPredicted RBP8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 PEX1O43933 1283 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 PRPSAP2O60256 369 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 TNFAIP8O95379 198 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 CYP11A1P05108 521 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 CDH2P19022 906 aaPredicted RBP8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 RCVRNP35243 200 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 SLC26A3P40879 764 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 LHX1P48742 406 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 CLK3P49761 638 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 CDH6P55285 790 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 CCNIQ14094 377 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 RAB41Q5JT25 222 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 C6orf52Q5T4I8 152 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 CFAP161Q6P656 301 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 AAGABQ6PD74 315 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 LPCAT2Q7L5N7 544 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 HID1Q8IV36 788 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 ZNF276Q8N554 614 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 PLD5Q8N7P1 536 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 PSD4Q8NDX1 1056 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 PDZD8Q8NEN9 1154 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 RAET1EQ8TD07 263 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 NDRG1Q92597 394 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 DCUN1D1Q96GG9 259 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 SMOQ99835 787 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 PAIP1Q9H074 479 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 RBM38Q9H0Z9 239 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 C10orf88Q9H8K7 445 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 PLGRKTQ9HBL7 147 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 PCDH9Q9HC56 1237 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 RGS18Q9NS28 235 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 UCKL1Q9NWZ5 548 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 TRNAU1APQ9NX07 287 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 KCNN3Q9UGI6 736 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 RSL24D1Q9UHA3 163 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 COQ6Q9Y2Z9 468 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 GPSM3Q9Y4H4 160 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 ANGPTL3Q9Y5C1 460 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 TIMM13Q9Y5L4 95 aaPredicted RBP8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 CEP350Q5VT06 3117 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 LOC100653049A0A140TA62 436 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 MYBPHLA2RUH7 354 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 CAPN14A8MX76 684 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 C9IYK1 514 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 TRDMT1O14717 391 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 DAB1O75553 588 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 KRT34O76011 436 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 POMCP01189 267 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 PROCP04070 461 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 OCM2P0CE71 109 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 OCMP0CE72 109 aaPredicted RBP8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 L1CAMP32004 1257 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 SOX11P35716 441 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 MAPKAPK2P49137 400 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 GPR85P60893 370 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 MRPS5P82675 430 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 ADIGQ0VDE8 80 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 PEX6Q13608 980 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 SQLEQ14534 574 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 PDK2Q15119 407 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 PRKD1Q15139 912 aaPredicted RBP8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 NOMO1Q15155 1222 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 SLC9A4Q6AI14 798 aa8.04□□□□□ -1.12
PDLIM5-221ENST00000542407 NPNTQ6UXI9 565 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms