RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 TRIM24O15164 1050 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 TBX1O43435 398 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 CDK14O94921 469 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 SERPINA1P01009 418 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 SLC26A2P50443 739 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 RNF144AP50876 292 aaPredicted RBP6.33□□□□□ -1.4
DMD-228ENST00000541735 SLC12A3P55017 1021 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 RPL38P63173 70 aaKnown RBP6.33□□□□□ -1.4
DMD-228ENST00000541735 NEDD8Q15843 81 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 INTS5Q6P9B9 1019 aaKnown RBP6.33□□□□□ -1.4
DMD-228ENST00000541735 BARGINQ6ZT62 677 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 EIF3MQ7L2H7 374 aaKnown RBP6.33□□□□□ -1.4
DMD-228ENST00000541735 TCEANCQ8N8B7 351 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 MAGEE2Q8TD90 523 aaPredicted RBP6.33□□□□□ -1.4
DMD-228ENST00000541735 CENPIQ92674 756 aaPredicted RBP6.33□□□□□ -1.4
DMD-228ENST00000541735 DTNBP1Q96EV8 351 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 FCRL4Q96PJ5 515 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 C1orf50Q9BV19 199 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 TRMT61BQ9BVS5 477 aaKnown RBP6.33□□□□□ -1.4
DMD-228ENST00000541735 CRISPLD1Q9H336 500 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 NXF3Q9H4D5 531 aaKnown RBP6.33□□□□□ -1.4
DMD-228ENST00000541735 SEC61A2Q9H9S3 476 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 AGO1Q9UL18 857 aaKnown RBP6.33□□□□□ -1.4
DMD-228ENST00000541735 GOLGA4Q13439 2230 aaKnown RBP6.33□□□□□ -1.4
DMD-228ENST00000541735 MC4RP32245 332 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 RPS6KA3P51812 740 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 AQP5P55064 265 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 SPIBQ01892 262 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 FMR1Q06787 632 aaKnown RBP eCLIP6.33□□□□□ -1.4
DMD-228ENST00000541735 FCHO2Q0JRZ9 810 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 SLC29A2Q14542 456 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 SMARCD3Q6STE5 483 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 RTL4Q6ZR62 310 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 STK32CQ86UX6 486 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 RELL1Q8IUW5 271 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 EPS8L3Q8TE67 593 aaKnown RBP6.33□□□□□ -1.4
DMD-228ENST00000541735 ATP6V1G3Q96LB4 118 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 NUSAP1Q9BXS6 441 aaKnown RBP6.33□□□□□ -1.4
DMD-228ENST00000541735 CARS2Q9HA77 564 aaKnown RBP6.33□□□□□ -1.4
DMD-228ENST00000541735 ACSS2Q9NR19 701 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 GIT1Q9Y2X7 761 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 TREHO43280 583 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 NOL4O94818 638 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 C1RP00736 705 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 PSMB4P28070 264 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 TPP2P29144 1249 aaPredicted RBP6.33□□□□□ -1.4
DMD-228ENST00000541735 DLG4P78352 724 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 POU5F1Q01860 360 aaKnown RBP6.33□□□□□ -1.4
DMD-228ENST00000541735 ARHGAP40Q5TG30 622 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 TMED8Q6PL24 325 aaPredicted RBP6.33□□□□□ -1.4
DMD-228ENST00000541735 SPATA4Q8NEY3 305 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 CCDC126Q96EE4 140 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 CALR3Q96L12 384 aaKnown RBP6.33□□□□□ -1.4
DMD-228ENST00000541735 HEPHQ9BQS7 1158 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 CHID1Q9BWS9 393 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 FRMD8P1Q9BZ68 369 aaPredicted RBP6.33□□□□□ -1.4
DMD-228ENST00000541735 EIF2B3Q9NR50 452 aaKnown RBP6.33□□□□□ -1.4
DMD-228ENST00000541735 HEY2Q9UBP5 337 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 FCF1Q9Y324 198 aaKnown RBP6.33□□□□□ -1.4
DMD-228ENST00000541735 GCC2Q8IWJ2 1684 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 SLC15A5A6NIM6 579 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 FCER2P06734 321 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 C4BPBP20851 252 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 KCNA3P22001 575 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 FOXK1P85037 733 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 CDH17Q12864 832 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 BNIP3Q12983 259 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 HSDL1Q3SXM5 330 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 TOR1AIP1Q5JTV8 583 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 KLHDC7AQ5VTJ3 777 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 ZZZ3Q8IYH5 903 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 XAGE5Q8WWM1 108 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 DPF2Q92785 391 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 DGCR6LQ9BY27 220 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 ZYG11BQ9C0D3 744 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 STRADBQ9C0K7 418 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 SMG9Q9H0W8 520 aaKnown RBP6.33□□□□□ -1.4
DMD-228ENST00000541735 RBM12Q9NTZ6 932 aaKnown RBP6.33□□□□□ -1.4
DMD-228ENST00000541735 BLOC1S4Q9NUP1 217 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 KCND2Q9NZV8 630 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 DDX20Q9UHI6 824 aaKnown RBP6.33□□□□□ -1.4
DMD-228ENST00000541735 SMG5Q9UPR3 1016 aaKnown RBP6.33□□□□□ -1.4
DMD-228ENST00000541735 TSC22D4Q9Y3Q8 395 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 GRID2IPA4D2P6 1211 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 CCT8L1PA6NM43 557 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 C9IYK1 514 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 KMOO15229 486 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 PGM3O95394 542 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 CYP4B1P13584 511 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 UGT1A5P35504 534 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 ACTR1BP42025 376 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 CXCR3P49682 368 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 GJA9P57773 515 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 ACTR1AP61163 376 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 CAP1Q01518 475 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 FASTKQ14296 549 aaKnown RBP6.33□□□□□ -1.4
DMD-228ENST00000541735 ZNF846Q147U1 533 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 MAPK14Q16539 360 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 DNAL1Q4LDG9 190 aa6.33□□□□□ -1.4
DMD-228ENST00000541735 C4orf46Q504U0 113 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms