RNA–Protein interactions for RNA: ENST00000541461.5

PHACTR3-209, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,349 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-209ENST00000541461 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 UPF3AQ9H1J1 476 aaKnown RBP10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 MEAF6Q9HAF1 191 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 MRPL40Q9NQ50 206 aaKnown RBP10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 IGSF5Q9NSI5 407 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 PDCD11Q14690 1871 aaKnown RBP10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 ATP6AP2A0A1C7CYW4 349 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 SAC3D1A6NKF1 404 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 AKAP10O43572 662 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 ATP6AP2O75787 350 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 LRIG2O94898 1065 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 SMIM10L2AP0DMW4 78 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 SMIM10L2BP0DMW5 78 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 TSPAN8P19075 237 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 GRIA3P42263 894 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 PSEN2P49810 448 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 SLC7A2P52569 658 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 LILRA4P59901 499 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 DNAJB13P59910 316 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 PLOD1Q02809 727 aaPredicted RBP10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 ZNF789Q5FWF6 425 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 WSCD1Q658N2 575 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 ZNF470Q6ECI4 717 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 DENND5AQ6IQ26 1287 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 NOTUMQ6P988 496 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 LIMS2Q7Z4I7 341 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 LINC00523Q86TU6 105 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 CUZD1Q86UP6 607 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 DHFR2Q86XF0 187 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 LZICQ8WZA0 190 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 DPF3Q92784 378 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 PBXIP1Q96AQ6 731 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 ZNF419Q96HQ0 510 aaPredicted RBP10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 ZNF560Q96MR9 790 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 RANBP9Q96S59 729 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 UHRF1Q96T88 793 aaPredicted RBP10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 VAT1Q99536 393 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 COLEC11Q9BWP8 271 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 BRD8Q9H0E9 1235 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 TKTL2Q9H0I9 626 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 RNF208Q9H0X6 261 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 ATXN3LQ9H3M9 355 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 CLK4Q9HAZ1 481 aaKnown RBP10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 FBRSL1Q9HCM7 1045 aaKnown RBP10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 RRN3Q9NYV6 651 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 TMEM181Q9P2C4 612 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 CACNG4Q9UBN1 327 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 EBF1Q9UH73 591 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 CROTQ9UKG9 612 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 COL1A2P08123 1366 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 NRCAMQ92823 1304 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 A8MT66 165 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 DFFAO00273 331 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 NRP2O60462 931 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 SRP72O76094 671 aaKnown RBP10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 UGT1A6P19224 532 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 ATP6V1B2P21281 511 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 LRPAP1P30533 357 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 CHRNA4P43681 627 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 SLC12A2P55011 1212 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 NME5P56597 212 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 DAOAP59103 153 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 CTBSQ01459 385 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 MAPRE2Q15555 327 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 INTS6LQ5JSJ4 861 aaKnown RBP10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 BTBD8Q5XKL5 378 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 CLEC6AQ6EIG7 209 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 CLVS1Q8IUQ0 354 aaPredicted RBP10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 TFAP2CQ92754 450 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 DUS3LQ96G46 650 aaKnown RBP10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 ANKRD60Q9BZ19 345 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 WDCPQ9H6R7 721 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 IL1RL2Q9HB29 575 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 TMEM30AQ9NV96 361 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 SLC8A2Q9UPR5 921 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 KIAA0100Q14667 2235 aaKnown RBP10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 A0A087X1B8 175 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 FAM149AA5PLN7 773 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 TREHO43280 583 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 FOXD2O60548 495 aaPredicted RBP10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 GPR32O75388 356 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 BMP10O95393 424 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 CCL5P13501 91 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 WARSP23381 471 aaKnown RBP10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 DNAJB1P25685 340 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 CD151P48509 253 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 ENTPD1P49961 510 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 AIF1P55008 147 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 NKX3-2P78367 333 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 ARL13BQ3SXY8 428 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 SV2CQ496J9 727 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 TECRLQ5HYJ1 363 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 SAMD4BQ5PRF9 694 aaKnown RBP10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 IL31Q6EBC2 164 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 PPP4R4Q6NUP7 873 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 RWDD4Q6NW29 188 aaKnown RBP10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 RNF180Q86T96 592 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 ANKFN1Q8N957 763 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 KLHDC9Q8NEP7 349 aa10.58□□□□□ -0.72
PHACTR3-209ENST00000541461 PPHLN1Q8NEY8 458 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms