RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 MLLT3P42568 568 aaPredicted RBP12.59□□□□□ -0.39
VAMP1-206ENST00000538970 SRP54P61011 504 aaKnown RBP12.59□□□□□ -0.39
VAMP1-206ENST00000538970 KCNC4Q03721 635 aa12.59□□□□□ -0.39
VAMP1-206ENST00000538970 RALGDSQ12967 914 aa12.59□□□□□ -0.39
VAMP1-206ENST00000538970 ERMARDQ5T6L9 678 aa12.59□□□□□ -0.39
VAMP1-206ENST00000538970 ENPP7Q6UWV6 458 aa12.59□□□□□ -0.39
VAMP1-206ENST00000538970 ARHGAP36Q6ZRI8 547 aa12.59□□□□□ -0.39
VAMP1-206ENST00000538970 CYP4V2Q6ZWL3 525 aaPredicted RBP12.59□□□□□ -0.39
VAMP1-206ENST00000538970 CLEC14AQ86T13 490 aa12.59□□□□□ -0.39
VAMP1-206ENST00000538970 SRLQ86TD4 932 aa12.59□□□□□ -0.39
VAMP1-206ENST00000538970 GKN2Q86XP6 184 aa12.59□□□□□ -0.39
VAMP1-206ENST00000538970 SDR16C5Q8N3Y7 309 aa12.59□□□□□ -0.39
VAMP1-206ENST00000538970 AOPEPQ8N6M6 819 aa12.59□□□□□ -0.39
VAMP1-206ENST00000538970 PLA2G15Q8NCC3 412 aa12.59□□□□□ -0.39
VAMP1-206ENST00000538970 ATL2Q8NHH9 583 aa12.59□□□□□ -0.39
VAMP1-206ENST00000538970 WDR36Q8NI36 951 aaKnown RBP12.59□□□□□ -0.39
VAMP1-206ENST00000538970 SCG3Q8WXD2 468 aaKnown RBP12.59□□□□□ -0.39
VAMP1-206ENST00000538970 CCDC74AQ96AQ1 378 aa12.59□□□□□ -0.39
VAMP1-206ENST00000538970 PDXPQ96GD0 296 aa12.59□□□□□ -0.39
VAMP1-206ENST00000538970 WDR92Q96MX6 357 aa12.59□□□□□ -0.39
VAMP1-206ENST00000538970 GBP4Q96PP9 640 aa12.59□□□□□ -0.39
VAMP1-206ENST00000538970 CINPQ9BW66 212 aaPredicted RBP12.59□□□□□ -0.39
VAMP1-206ENST00000538970 ATP13A3Q9H7F0 1226 aa12.59□□□□□ -0.39
VAMP1-206ENST00000538970 SIRPGQ9P1W8 387 aa12.59□□□□□ -0.39
VAMP1-206ENST00000538970 GULP1Q9UBP9 304 aa12.59□□□□□ -0.39
VAMP1-206ENST00000538970 PCSK1NQ9UHG2 260 aa12.59□□□□□ -0.39
VAMP1-206ENST00000538970 RABGEF1Q9UJ41 708 aa12.59□□□□□ -0.39
VAMP1-206ENST00000538970 CCDC187A0A096LP49 1063 aa12.58□□□□□ -0.4
VAMP1-206ENST00000538970 CFAP69A5D8W1 941 aa12.58□□□□□ -0.4
VAMP1-206ENST00000538970 TMEM191CA6NGB0 347 aa12.58□□□□□ -0.4
VAMP1-206ENST00000538970 TEX33O43247 280 aa12.58□□□□□ -0.4
VAMP1-206ENST00000538970 PALMO75781 387 aa12.58□□□□□ -0.4
VAMP1-206ENST00000538970 ERCC2P18074 760 aa12.58□□□□□ -0.4
VAMP1-206ENST00000538970 KIAA1024LP59773 190 aa12.58□□□□□ -0.4
VAMP1-206ENST00000538970 RHDQ02161 417 aa12.58□□□□□ -0.4
VAMP1-206ENST00000538970 IL10RBQ08334 325 aa12.58□□□□□ -0.4
VAMP1-206ENST00000538970 ARHGAP40Q5TG30 622 aa12.58□□□□□ -0.4
VAMP1-206ENST00000538970 FOXR1Q6PIV2 292 aa12.58□□□□□ -0.4
VAMP1-206ENST00000538970 DPPA4Q7L190 304 aa12.58□□□□□ -0.4
VAMP1-206ENST00000538970 RD3Q7Z3Z2 195 aa12.58□□□□□ -0.4
VAMP1-206ENST00000538970 ARL14Q8N4G2 192 aa12.58□□□□□ -0.4
VAMP1-206ENST00000538970 FNIP1Q8TF40 1166 aa12.58□□□□□ -0.4
VAMP1-206ENST00000538970 SNRNP27Q8WVK2 155 aaKnown RBP12.58□□□□□ -0.4
VAMP1-206ENST00000538970 LIN37Q96GY3 246 aaPredicted RBP12.58□□□□□ -0.4
VAMP1-206ENST00000538970 RBM15Q96T37 977 aaKnown RBP eCLIP12.58□□□□□ -0.4
VAMP1-206ENST00000538970 TRIM7Q9C029 511 aa12.58□□□□□ -0.4
VAMP1-206ENST00000538970 SP110Q9HB58 689 aa12.58□□□□□ -0.4
VAMP1-206ENST00000538970 GPR34Q9UPC5 381 aa12.58□□□□□ -0.4
VAMP1-206ENST00000538970 DGKBQ9Y6T7 804 aa12.58□□□□□ -0.4
VAMP1-206ENST00000538970 COL12A1Q99715 3063 aa12.57□□□□□ -0.4
VAMP1-206ENST00000538970 A0A1W2PQM1 296 aa12.57□□□□□ -0.4
VAMP1-206ENST00000538970 D6RAR5 112 aa12.57□□□□□ -0.4
VAMP1-206ENST00000538970 DFFAO00273 331 aa12.57□□□□□ -0.4
VAMP1-206ENST00000538970 TRAFD1O14545 582 aaPredicted RBP12.57□□□□□ -0.4
VAMP1-206ENST00000538970 DAPK3O43293 454 aa12.57□□□□□ -0.4
VAMP1-206ENST00000538970 LRCH4O75427 683 aa12.57□□□□□ -0.4
VAMP1-206ENST00000538970 RNF8O76064 485 aa12.57□□□□□ -0.4
VAMP1-206ENST00000538970 RECQL5O94762 991 aaPredicted RBP12.57□□□□□ -0.4
VAMP1-206ENST00000538970 TNFSF15O95150 251 aa12.57□□□□□ -0.4
VAMP1-206ENST00000538970 RPLP0P05388 317 aaKnown RBP12.57□□□□□ -0.4
VAMP1-206ENST00000538970 ITGA2BP08514 1039 aa12.57□□□□□ -0.4
VAMP1-206ENST00000538970 ELFN1P0C7U0 828 aa12.57□□□□□ -0.4
VAMP1-206ENST00000538970 GM2AP17900 193 aa12.57□□□□□ -0.4
VAMP1-206ENST00000538970 MIPP30301 263 aa12.57□□□□□ -0.4
VAMP1-206ENST00000538970 ANP32AP39687 249 aaKnown RBP12.57□□□□□ -0.4
VAMP1-206ENST00000538970 TYRO3Q06418 890 aa12.57□□□□□ -0.4
VAMP1-206ENST00000538970 BCL2L1Q07817 233 aa12.57□□□□□ -0.4
VAMP1-206ENST00000538970 VAC14Q08AM6 782 aa12.57□□□□□ -0.4
VAMP1-206ENST00000538970 NSUN2Q08J23 767 aaKnown RBP eCLIP12.57□□□□□ -0.4
VAMP1-206ENST00000538970 DPYSQ14117 519 aa12.57□□□□□ -0.4
VAMP1-206ENST00000538970 LY6DQ14210 128 aa12.57□□□□□ -0.4
VAMP1-206ENST00000538970 RFTN1Q14699 578 aaPredicted RBP12.57□□□□□ -0.4
VAMP1-206ENST00000538970 TAF1BQ53T94 588 aaPredicted RBP12.57□□□□□ -0.4
VAMP1-206ENST00000538970 PPP6R3Q5H9R7 873 aaPredicted RBP12.57□□□□□ -0.4
VAMP1-206ENST00000538970 CCDC183Q5T5S1 534 aa12.57□□□□□ -0.4
VAMP1-206ENST00000538970 E4F1Q66K89 784 aaPredicted RBP12.57□□□□□ -0.4
VAMP1-206ENST00000538970 LIPIQ6XZB0 460 aa12.57□□□□□ -0.4
VAMP1-206ENST00000538970 B3GNT8Q7Z7M8 397 aa12.57□□□□□ -0.4
VAMP1-206ENST00000538970 PSTKQ8IV42 348 aaKnown RBP12.57□□□□□ -0.4
VAMP1-206ENST00000538970 OR56A4Q8NGH8 313 aa12.57□□□□□ -0.4
VAMP1-206ENST00000538970 OR1E3Q8WZA6 343 aa12.57□□□□□ -0.4
VAMP1-206ENST00000538970 FUBP1Q96AE4 644 aaKnown RBP12.57□□□□□ -0.4
VAMP1-206ENST00000538970 CCDC97Q96F63 343 aaPredicted RBP12.57□□□□□ -0.4
VAMP1-206ENST00000538970 NSMCE3Q96MG7 304 aa12.57□□□□□ -0.4
VAMP1-206ENST00000538970 GFM1Q96RP9 751 aaKnown RBP12.57□□□□□ -0.4
VAMP1-206ENST00000538970 HAUS4Q9H6D7 363 aa12.57□□□□□ -0.4
VAMP1-206ENST00000538970 FGF22Q9HCT0 170 aa12.57□□□□□ -0.4
VAMP1-206ENST00000538970 RTN4Q9NQC3 1192 aaKnown RBP12.57□□□□□ -0.4
VAMP1-206ENST00000538970 LRRK1Q38SD2 2015 aa12.57□□□□□ -0.4
VAMP1-206ENST00000538970 TMEM202A6NGA9 273 aa12.56□□□□□ -0.4
VAMP1-206ENST00000538970 CACNB4O00305 520 aaPredicted RBP12.56□□□□□ -0.4
VAMP1-206ENST00000538970 PRPSAP2O60256 369 aa12.56□□□□□ -0.4
VAMP1-206ENST00000538970 WISP1O95388 367 aa12.56□□□□□ -0.4
VAMP1-206ENST00000538970 TNFP01375 233 aa12.56□□□□□ -0.4
VAMP1-206ENST00000538970 GZMAP12544 262 aa12.56□□□□□ -0.4
VAMP1-206ENST00000538970 HCAR3P49019 387 aa12.56□□□□□ -0.4
VAMP1-206ENST00000538970 ZNF135P52742 658 aaPredicted RBP12.56□□□□□ -0.4
VAMP1-206ENST00000538970 AP1S1P61966 158 aa12.56□□□□□ -0.4
VAMP1-206ENST00000538970 CCL7P80098 99 aa12.56□□□□□ -0.4
VAMP1-206ENST00000538970 EIF3IQ13347 325 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 513.9 ms