RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 CCNIQ14094 377 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 ZNF460Q14592 562 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 ZRSR2Q15696 482 aaKnown RBP9.3□□□□□ -0.92
DDB1-211ENST00000538280 PSMD5Q16401 504 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 LSM12Q3MHD2 195 aaKnown RBP9.3□□□□□ -0.92
DDB1-211ENST00000538280 CTXN3Q4LDR2 81 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 RALGPS1Q5JS13 557 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 CFAP157Q5JU67 520 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 RBM20Q5T481 1227 aaKnown RBP9.3□□□□□ -0.92
DDB1-211ENST00000538280 MARC1Q5VT66 337 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 SEL1L3Q68CR1 1132 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 ZNF470Q6ECI4 717 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 IRGCQ6NXR0 463 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 CNSTQ6PJW8 725 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 FRMD7Q6ZUT3 714 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 HERC6Q8IVU3 1022 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 TXNDC5Q8NBS9 432 aaKnown RBP9.3□□□□□ -0.92
DDB1-211ENST00000538280 GABPB2Q8TAK5 448 aaPredicted RBP9.3□□□□□ -0.92
DDB1-211ENST00000538280 SHKBP1Q8TBC3 707 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 C2orf15Q8WU43 125 aaKnown RBP9.3□□□□□ -0.92
DDB1-211ENST00000538280 HEXDCQ8WVB3 486 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 FBXO32Q969P5 355 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 TSPAN17Q96FV3 270 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 FEM1CQ96JP0 617 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 SCYL1Q96KG9 808 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 UBXN10Q96LJ8 280 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 CEP295NLQ96MC4 621 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 CASD1Q96PB1 797 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 OLFM1Q99784 485 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 TTLL2Q9BWV7 592 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 CRISPLD1Q9H336 500 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 SP110Q9HB58 689 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 S100A14Q9HCY8 104 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 NT5MQ9NPB1 228 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 TLR8Q9NR97 1041 aaKnown RBP9.3□□□□□ -0.92
DDB1-211ENST00000538280 CDH22Q9UJ99 828 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 PRPF19Q9UMS4 504 aaKnown RBP9.3□□□□□ -0.92
DDB1-211ENST00000538280 ARHGAP26Q9UNA1 814 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 LRCH1Q9Y2L9 728 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 PRG3Q9Y2Y8 225 aaPredicted RBP9.3□□□□□ -0.92
DDB1-211ENST00000538280 E9PBE3 544 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 SDHDO14521 159 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 DCXO43602 365 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 LDB2O43679 373 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 KLHL41O60662 606 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 PRAMEF11O60813 436 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 TADA2AO75478 443 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 NEBLO76041 1014 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 EFEMP2O95967 443 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 EPOP01588 193 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 LTA4HP09960 611 aaKnown RBP9.29□□□□□ -0.92
DDB1-211ENST00000538280 THRAP10827 490 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 HOXB8P17481 243 aaPredicted RBP9.29□□□□□ -0.92
DDB1-211ENST00000538280 TFEBP19484 476 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 NCF2P19878 526 aaPredicted RBP9.29□□□□□ -0.92
DDB1-211ENST00000538280 PBX3P40426 434 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 CCR10P46092 362 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 GLRBP48167 497 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 SUOXP51687 545 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 PGGT1BP53609 377 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 INHBCP55103 352 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 AP2B1P63010 937 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 CUL3Q13618 768 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 SEPT6Q14141 434 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 MUM1Q2TAK8 710 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 ZNF789Q5FWF6 425 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 SIRPB2Q5JXA9 342 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 HECTD2Q5U5R9 776 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 C1orf146Q5VVC0 180 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 RAP1GAP2Q684P5 730 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 NADSYN1Q6IA69 706 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 ACAD11Q709F0 780 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 CHSY3Q70JA7 882 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 PIWIL4Q7Z3Z4 852 aaKnown RBP9.29□□□□□ -0.92
DDB1-211ENST00000538280 CILP2Q8IUL8 1156 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 KBTBD2Q8IY47 623 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 CRIPAKQ8N1N5 446 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 PELI3Q8N2H9 469 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 PPFIBP2Q8ND30 876 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 GPR150Q8NGU9 434 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 RP9Q8TA86 221 aaKnown RBP9.29□□□□□ -0.92
DDB1-211ENST00000538280 SCG3Q8WXD2 468 aaKnown RBP9.29□□□□□ -0.92
DDB1-211ENST00000538280 PSMG2Q969U7 264 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 MIEF2Q96C03 454 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 CCDC126Q96EE4 140 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 KLHL5Q96PQ7 755 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 LENG8Q96PV6 779 aaPredicted RBP9.29□□□□□ -0.92
DDB1-211ENST00000538280 FAM193BQ96PV7 902 aaPredicted RBP9.29□□□□□ -0.92
DDB1-211ENST00000538280 TMEM175Q9BSA9 504 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 GPR62Q9BZJ7 368 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 ATXN3LQ9H3M9 355 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 ZDHHC7Q9NXF8 308 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 MARCH2Q9P0N8 246 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 PPM1HQ9ULR3 514 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 CORO1CQ9ULV4 474 aaPredicted RBP9.29□□□□□ -0.92
DDB1-211ENST00000538280 CDYLQ9Y232 598 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 SSX2IPQ9Y2D8 614 aa9.29□□□□□ -0.92
DDB1-211ENST00000538280 SLC12A8A0AV02 714 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 RGSL1A5PLK6 1076 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 A8MT66 165 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms