RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 FAM72AQ5TYM5 149 aa4.99□□□□□ -1.61
CCDC7-208ENST00000537047 IRAK1BP1Q5VVH5 260 aa4.99□□□□□ -1.61
CCDC7-208ENST00000537047 FAM72DQ6L9T8 149 aa4.99□□□□□ -1.61
CCDC7-208ENST00000537047 DENND1BQ6P3S1 775 aa4.99□□□□□ -1.61
CCDC7-208ENST00000537047 CCNI2Q6ZMN8 369 aaPredicted RBP4.99□□□□□ -1.61
CCDC7-208ENST00000537047 FAM72BQ86X60 149 aa4.99□□□□□ -1.61
CCDC7-208ENST00000537047 TMEM219Q86XT9 240 aa4.99□□□□□ -1.61
CCDC7-208ENST00000537047 SLC24A4Q8NFF2 622 aa4.99□□□□□ -1.61
CCDC7-208ENST00000537047 SNAPC3Q92966 411 aa4.99□□□□□ -1.61
CCDC7-208ENST00000537047 TWNKQ96RR1 684 aa4.99□□□□□ -1.61
CCDC7-208ENST00000537047 DERAQ9Y315 318 aa4.99□□□□□ -1.61
CCDC7-208ENST00000537047 NFE2L3Q9Y4A8 694 aa4.99□□□□□ -1.61
CCDC7-208ENST00000537047 ATXN2Q99700 1313 aaKnown RBP4.98□□□□□ -1.61
CCDC7-208ENST00000537047 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.98□□□□□ -1.61
CCDC7-208ENST00000537047 ASPDHA6ND91 283 aa4.98□□□□□ -1.61
CCDC7-208ENST00000537047 PABPN1LA6NDY0 278 aaKnown RBP4.98□□□□□ -1.61
CCDC7-208ENST00000537047 TNNT1P13805 278 aa4.98□□□□□ -1.61
CCDC7-208ENST00000537047 ITGA2P17301 1181 aa4.98□□□□□ -1.61
CCDC7-208ENST00000537047 EIF2S3P41091 472 aaKnown RBP4.98□□□□□ -1.61
CCDC7-208ENST00000537047 FMO5P49326 533 aa4.98□□□□□ -1.61
CCDC7-208ENST00000537047 AARSP49588 968 aaKnown RBP eCLIP4.98□□□□□ -1.61
CCDC7-208ENST00000537047 TUBB8Q3ZCM7 444 aa4.98□□□□□ -1.61
CCDC7-208ENST00000537047 STXBP5Q5T5C0 1151 aa4.98□□□□□ -1.61
CCDC7-208ENST00000537047 LRRC8EQ6NSJ5 796 aa4.98□□□□□ -1.61
CCDC7-208ENST00000537047 ANKRD54Q6NXT1 300 aa4.98□□□□□ -1.61
CCDC7-208ENST00000537047 C1orf228Q6PIY5 440 aa4.98□□□□□ -1.61
CCDC7-208ENST00000537047 TBC1D26Q86UD7 250 aa4.98□□□□□ -1.61
CCDC7-208ENST00000537047 CPXM2Q8N436 756 aa4.98□□□□□ -1.61
CCDC7-208ENST00000537047 DUSP19Q8WTR2 217 aa4.98□□□□□ -1.61
CCDC7-208ENST00000537047 AFG1LQ8WV93 481 aa4.98□□□□□ -1.61
CCDC7-208ENST00000537047 RAB40AQ8WXH6 277 aa4.98□□□□□ -1.61
CCDC7-208ENST00000537047 ZC3HAV1LQ96H79 300 aaKnown RBP4.98□□□□□ -1.61
CCDC7-208ENST00000537047 NUF2Q9BZD4 464 aa4.98□□□□□ -1.61
CCDC7-208ENST00000537047 DDX4Q9NQI0 724 aaKnown RBP4.98□□□□□ -1.61
CCDC7-208ENST00000537047 CTNNAL1Q9UBT7 734 aa4.98□□□□□ -1.61
CCDC7-208ENST00000537047 DNAJC16Q9Y2G8 782 aa4.98□□□□□ -1.61
CCDC7-208ENST00000537047 A0A1W2PS18 150 aa4.97□□□□□ -1.61
CCDC7-208ENST00000537047 B9A039 149 aa4.97□□□□□ -1.61
CCDC7-208ENST00000537047 F5H423 210 aaPredicted RBP4.97□□□□□ -1.61
CCDC7-208ENST00000537047 NDUFB4O95168 129 aa4.97□□□□□ -1.61
CCDC7-208ENST00000537047 ZNF8P17098 575 aaPredicted RBP4.97□□□□□ -1.61
CCDC7-208ENST00000537047 RXRAP19793 462 aa4.97□□□□□ -1.61
CCDC7-208ENST00000537047 ADD2P35612 726 aa4.97□□□□□ -1.61
CCDC7-208ENST00000537047 SREBF2Q12772 1141 aa4.97□□□□□ -1.61
CCDC7-208ENST00000537047 HSP90AB2PQ58FF8 381 aa4.97□□□□□ -1.61
CCDC7-208ENST00000537047 C17orf99Q6UX52 265 aa4.97□□□□□ -1.61
CCDC7-208ENST00000537047 THAP4Q8WY91 577 aa4.97□□□□□ -1.61
CCDC7-208ENST00000537047 KXD1Q9BQD3 176 aa4.97□□□□□ -1.61
CCDC7-208ENST00000537047 HAUS8Q9BT25 410 aa4.97□□□□□ -1.61
CCDC7-208ENST00000537047 STN1Q9H668 368 aaKnown RBP4.97□□□□□ -1.61
CCDC7-208ENST00000537047 SAYSD1Q9NPB0 183 aa4.97□□□□□ -1.61
CCDC7-208ENST00000537047 FAM90A7PA6NKC0 464 aa4.96□□□□□ -1.62
CCDC7-208ENST00000537047 FAM90A22PA8MWA6 464 aa4.96□□□□□ -1.62
CCDC7-208ENST00000537047 FAM90A12PA8MX19 464 aa4.96□□□□□ -1.62
CCDC7-208ENST00000537047 FAM90A23PA8MXZ1 464 aa4.96□□□□□ -1.62
CCDC7-208ENST00000537047 PER2O15055 1255 aa4.96□□□□□ -1.62
CCDC7-208ENST00000537047 TK1P04183 234 aa4.96□□□□□ -1.62
CCDC7-208ENST00000537047 G6PDP11413 515 aa4.96□□□□□ -1.62
CCDC7-208ENST00000537047 ALDH4A1P30038 563 aa4.96□□□□□ -1.62
CCDC7-208ENST00000537047 NR1H2P55055 460 aa4.96□□□□□ -1.62
CCDC7-208ENST00000537047 TRIM14Q14142 442 aa4.96□□□□□ -1.62
CCDC7-208ENST00000537047 PPP6R3Q5H9R7 873 aaPredicted RBP4.96□□□□□ -1.62
CCDC7-208ENST00000537047 ZNF772Q68DY9 489 aaPredicted RBP4.96□□□□□ -1.62
CCDC7-208ENST00000537047 ARHGAP11AQ6P4F7 1023 aa4.96□□□□□ -1.62
CCDC7-208ENST00000537047 NFE4Q86UQ8 179 aa4.96□□□□□ -1.62
CCDC7-208ENST00000537047 CHERPQ8IWX8 916 aaKnown RBP4.96□□□□□ -1.62
CCDC7-208ENST00000537047 KIAA2013Q8IYS2 634 aa4.96□□□□□ -1.62
CCDC7-208ENST00000537047 SPEM1Q8N4L4 309 aa4.96□□□□□ -1.62
CCDC7-208ENST00000537047 KCNH5Q8NCM2 988 aa4.96□□□□□ -1.62
CCDC7-208ENST00000537047 VPS37AQ8NEZ2 397 aa4.96□□□□□ -1.62
CCDC7-208ENST00000537047 GRAPLQ8TC17 118 aaPredicted RBP4.96□□□□□ -1.62
CCDC7-208ENST00000537047 CNOT9Q92600 299 aaKnown RBP4.96□□□□□ -1.62
CCDC7-208ENST00000537047 LITAFQ99732 161 aa4.96□□□□□ -1.62
CCDC7-208ENST00000537047 EPHX3Q9H6B9 360 aa4.96□□□□□ -1.62
CCDC7-208ENST00000537047 CNGB3Q9NQW8 809 aa4.96□□□□□ -1.62
CCDC7-208ENST00000537047 POU2F3Q9UKI9 436 aa4.96□□□□□ -1.62
CCDC7-208ENST00000537047 C17orf113A0A1B0GUU1 675 aa4.95□□□□□ -1.62
CCDC7-208ENST00000537047 ARHGAP10A1A4S6 786 aa4.95□□□□□ -1.62
CCDC7-208ENST00000537047 CD53P19397 219 aa4.95□□□□□ -1.62
CCDC7-208ENST00000537047 IL15P40933 162 aaPredicted RBP4.95□□□□□ -1.62
CCDC7-208ENST00000537047 TMPOP42166 694 aaKnown RBP4.95□□□□□ -1.62
CCDC7-208ENST00000537047 HTR3AP46098 478 aa4.95□□□□□ -1.62
CCDC7-208ENST00000537047 CHRNDQ07001 517 aa4.95□□□□□ -1.62
CCDC7-208ENST00000537047 TMEM30BQ3MIR4 351 aa4.95□□□□□ -1.62
CCDC7-208ENST00000537047 CTXN3Q4LDR2 81 aa4.95□□□□□ -1.62
CCDC7-208ENST00000537047 CCSAPQ6IQ19 270 aaPredicted RBP4.95□□□□□ -1.62
CCDC7-208ENST00000537047 FAM122CQ6P4D5 195 aa4.95□□□□□ -1.62
CCDC7-208ENST00000537047 CCDC174Q6PII3 467 aa4.95□□□□□ -1.62
CCDC7-208ENST00000537047 ZNF34Q8IZ26 560 aa4.95□□□□□ -1.62
CCDC7-208ENST00000537047 OTULINQ96BN8 352 aa4.95□□□□□ -1.62
CCDC7-208ENST00000537047 MXRA8Q9BRK3 442 aa4.95□□□□□ -1.62
CCDC7-208ENST00000537047 RBM4Q9BWF3 364 aaKnown RBP4.95□□□□□ -1.62
CCDC7-208ENST00000537047 MROH8Q9H579 483 aa4.95□□□□□ -1.62
CCDC7-208ENST00000537047 C17orf75Q9HAS0 396 aa4.95□□□□□ -1.62
CCDC7-208ENST00000537047 OBSCNQ5VST9 7968 aa4.95□□□□□ -1.62
CCDC7-208ENST00000537047 IGKV3D-15A0A087WSY6 115 aa4.94□□□□□ -1.62
CCDC7-208ENST00000537047 WEE2P0C1S8 567 aa4.94□□□□□ -1.62
CCDC7-208ENST00000537047 POSTNQ15063 836 aa4.94□□□□□ -1.62
CCDC7-208ENST00000537047 EIF2S3LQ2VIR3 472 aaKnown RBP4.94□□□□□ -1.62
CCDC7-208ENST00000537047 ARHGAP17Q68EM7 881 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms