RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 TMEM265A0A087WTH1 108 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 CENPXA8MT69 81 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 PDZK1P1A8MUH7 402 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 MIF4GDA9UHW6 222 aaKnown RBP3.75□□□□□ -1.81
MCF2-210ENST00000536274 KBTBD13C9JR72 458 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 C9JVG2 144 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 PTGES3LE9PB15 166 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 DFFAO00273 331 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 TM9SF1O15321 606 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 PI15O43692 258 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 EXTL3O43909 919 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 CYP7B1O75881 506 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 DXOO77932 396 aaKnown RBP3.75□□□□□ -1.81
MCF2-210ENST00000536274 TMEM63AO94886 807 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 SLITRK3O94933 977 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 PDE8BO95263 885 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 SNAP29O95721 258 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 JUNP05412 331 aaKnown RBP3.75□□□□□ -1.81
MCF2-210ENST00000536274 UGT2B4P06133 528 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 WEE2P0C1S8 567 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 TFE3P19532 575 aaPredicted RBP3.75□□□□□ -1.81
MCF2-210ENST00000536274 RRM2P31350 389 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 NPTX2P47972 431 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 CLCN7P51798 805 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 OSTNP61366 133 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 SP2Q02086 613 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 PPP1R8Q12972 351 aaKnown RBP3.75□□□□□ -1.81
MCF2-210ENST00000536274 ORC1Q13415 861 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 TUBA3CQ13748 450 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 TNFAIP1Q13829 316 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 DGCR6Q14129 220 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 NOL9Q5SY16 702 aaKnown RBP3.75□□□□□ -1.81
MCF2-210ENST00000536274 ALKBH2Q6NS38 261 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 PPP4R4Q6NUP7 873 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 SYCE2Q6PIF2 218 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 SH2D5Q6ZV89 423 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 GDPD3Q7L5L3 318 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 NLRP8Q86W28 1048 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 EPHX4Q8IUS5 362 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 LINC00518Q8N0U6 118 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 NDUFAF2Q8N183 169 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 ANGPTL6Q8NI99 470 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 FAM174AQ8TBP5 190 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 CHAC2Q8WUX2 184 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 AFG1LQ8WV93 481 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 CPA5Q8WXQ8 436 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 TFAP2CQ92754 450 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 ITCHQ96J02 903 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 AK8Q96MA6 479 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 MBOAT7Q96N66 472 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 DACH2Q96NX9 599 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 MTMR9Q96QG7 549 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 OR2B2Q9GZK3 357 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 PCIF1Q9H4Z3 704 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 CNNM2Q9H8M5 875 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.75□□□□□ -1.81
MCF2-210ENST00000536274 IL1RL2Q9HB29 575 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 HMG20AQ9NP66 347 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 MYOZ2Q9NPC6 264 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 CASS4Q9NQ75 786 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 CHRAC1Q9NRG0 131 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 SMYD2Q9NRG4 433 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 IL17RBQ9NRM6 502 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 TBC1D22BQ9NU19 505 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 TBC1D13Q9NVG8 400 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 CD274Q9NZQ7 290 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 IFT80Q9P2H3 777 aaPredicted RBP3.75□□□□□ -1.81
MCF2-210ENST00000536274 GMEB2Q9UKD1 530 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 PSME2Q9UL46 239 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 CNOT6Q9ULM6 557 aaKnown RBP3.75□□□□□ -1.81
MCF2-210ENST00000536274 FIS1Q9Y3D6 152 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 TESMINQ9Y4I5 508 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 SNCAIPQ9Y6H5 919 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 ZHX2Q9Y6X8 837 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 ASTN2O75129 1339 aaPredicted RBP3.75□□□□□ -1.81
MCF2-210ENST00000536274 A0A0G2JMZ2 1700 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 RNF103-CHMP3A0A140T963 221 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 TCRBV9S1A1TA0A576 114 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 RGSL1A5PLK6 1076 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 LINC00587B1AMM8 73 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 WWP2O00308 870 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 EDIL3O43854 480 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 UBE4BO95155 1302 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 INHBAP08476 426 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 CYP2A6P11509 494 aaPredicted RBP3.74□□□□□ -1.81
MCF2-210ENST00000536274 APEHP13798 732 aaKnown RBP3.74□□□□□ -1.81
MCF2-210ENST00000536274 ALOX12P18054 663 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 ATF6P18850 670 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 KCNA5P22460 613 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 ELK3P41970 407 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 GPD2P43304 727 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 SLC1A6P48664 564 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 NR2C2P49116 596 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 ZNF33BQ06732 778 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 DSC1Q08554 894 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 MGAT3Q09327 533 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 FCHO2Q0JRZ9 810 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 SLAMF1Q13291 335 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 LAPTM5Q13571 262 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 SLC12A1Q13621 1099 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms