RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 TRIM17Q9Y577 477 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 LOC100653049A0A140TA62 436 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 HDAC3O15379 428 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 GRID2O43424 1007 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 KRT34O76011 436 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 SLC11A2P49281 568 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 SGSHP51688 502 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 CLCN5P51795 746 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 MTA1Q13330 715 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 HECTD2Q5U5R9 776 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 SEL1L3Q68CR1 1132 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 APLFQ8IW19 511 aaPredicted RBP13.43□□□□□ -0.26
VPS33B-202ENST00000535906 RNF168Q8IYW5 571 aaPredicted RBP13.43□□□□□ -0.26
VPS33B-202ENST00000535906 CCNYL1Q8N7R7 359 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 SHKBP1Q8TBC3 707 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 SH3RF2Q8TEC5 729 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 UCMAQ8WVF2 138 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 ANKRD49Q8WVL7 239 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 FEM1CQ96JP0 617 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 TTC1Q99614 292 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 MAGEH1Q9H213 219 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 S100A14Q9HCY8 104 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.43□□□□□ -0.26
VPS33B-202ENST00000535906 CDH22Q9UJ99 828 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 MTF2Q9Y483 593 aaPredicted RBP13.43□□□□□ -0.26
VPS33B-202ENST00000535906 NEMP1O14524 444 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 JUNP05412 331 aaKnown RBP13.43□□□□□ -0.26
VPS33B-202ENST00000535906 CCDC166P0CW27 439 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 COX4I1P13073 169 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 CD1EP15812 388 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 ITGAXP20702 1163 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 KCNA5P22460 613 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 EPHA3P29320 983 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 RGRP47804 291 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 ERFP50548 548 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 CDKN2DP55273 166 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 PRKAA1Q13131 559 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 PEX6Q13608 980 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 TECRLQ5HYJ1 363 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 HECTD3Q5T447 861 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 ALG1LQ6GMV1 187 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 TMEM207Q6UWW9 146 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 FRMD7Q6ZUT3 714 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 GALNT7Q86SF2 657 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 GABPB2Q8TAK5 448 aaPredicted RBP13.43□□□□□ -0.26
VPS33B-202ENST00000535906 IGSF21Q96ID5 467 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 DNAJC1Q96KC8 554 aaKnown RBP13.43□□□□□ -0.26
VPS33B-202ENST00000535906 ZNF599Q96NL3 588 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 SPON2Q9BUD6 331 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 NUF2Q9BZD4 464 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 RNF38Q9H0F5 515 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 POMKQ9H5K3 350 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 CRYL1Q9Y2S2 319 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 VWA7Q9Y334 891 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 BACE2Q9Y5Z0 518 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 MICAL3Q7RTP6 2002 aa13.43□□□□□ -0.26
VPS33B-202ENST00000535906 STC2O76061 302 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 BAG2O95816 211 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 EPOP01588 193 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 FGF1P05230 155 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 SERPINF2P08697 491 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 HLA-DPA1P20036 260 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 VEGFBP49765 207 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 HK2P52789 917 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 CDH4P55283 916 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 DSG1Q02413 1049 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 ACVR1Q04771 509 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 KLF10Q13118 480 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 SLC14A2Q15849 920 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 FAM83EQ2M2I3 478 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 LSM12Q3MHD2 195 aaKnown RBP13.42□□□□□ -0.26
VPS33B-202ENST00000535906 KIAA1841Q6NSI8 718 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 PDZD8Q8NEN9 1154 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 OR13C4Q8NGS5 318 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 WBP2Q969T9 261 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 UBXN10Q96LJ8 280 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 MGME1Q9BQP7 344 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 VCXQ9H320 206 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 PAK6Q9NQU5 681 aaPredicted RBP13.42□□□□□ -0.26
VPS33B-202ENST00000535906 ARHGAP26Q9UNA1 814 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 TANC1Q9C0D5 1861 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 ZMPSTE24O75844 475 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 GOT2P00505 430 aaKnown RBP13.42□□□□□ -0.26
VPS33B-202ENST00000535906 LTA4HP09960 611 aaKnown RBP13.42□□□□□ -0.26
VPS33B-202ENST00000535906 CORO1AP31146 461 aaKnown RBP13.42□□□□□ -0.26
VPS33B-202ENST00000535906 EPHB1P54762 984 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 PRMT2P55345 433 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 BTG3Q14201 252 aaPredicted RBP13.42□□□□□ -0.26
VPS33B-202ENST00000535906 GSTA3Q16772 222 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 AGAP9Q5VTM2 703 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 KLHDC10Q6PID8 442 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 TRIM67Q6ZTA4 783 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 DEFB107AQ8IZN7 70 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 ZNF461Q8TAF7 563 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 BRSK1Q8TDC3 778 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 OVCA2Q8WZ82 227 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 JADE3Q92613 823 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 EXOC2Q96KP1 924 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 CEP295NLQ96MC4 621 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 TRIB3Q96RU7 358 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms