RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 SOX2P48431 317 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 CLK3P49761 638 aaKnown RBP3.5□□□□□ -1.85
SNHG1-202ENST00000535689 BLKP51451 505 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 SHC2P98077 582 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 GAB1Q13480 694 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 BYSLQ13895 437 aaKnown RBP3.5□□□□□ -1.85
SNHG1-202ENST00000535689 TWIST1Q15672 202 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 LRRC26Q2I0M4 334 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 GJB7Q6PEY0 223 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 PCSK4Q6UW60 755 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 IL20RBQ6UXL0 311 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 CCDC129Q6ZRS4 1044 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 RSRC2Q7L4I2 434 aaKnown RBP3.5□□□□□ -1.85
SNHG1-202ENST00000535689 CNGA4Q8IV77 575 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 SCN4BQ8IWT1 228 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 ZDHHC23Q8IYP9 409 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 ADGRF3Q8IZF5 1079 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 ESX1Q8N693 406 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 ANKRD13CQ8N6S4 541 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 GPRC5AQ8NFJ5 357 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-202ENST00000535689 WIPF2Q8TF74 440 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-202ENST00000535689 HDAC2Q92769 488 aaKnown RBP3.5□□□□□ -1.85
SNHG1-202ENST00000535689 STAMQ92783 540 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 ATP2A3Q93084 1043 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 MCRS1Q96EZ8 462 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 TIGD1Q96MW7 591 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 MACROD1Q9BQ69 325 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 INTS2Q9H0H0 1204 aaKnown RBP3.5□□□□□ -1.85
SNHG1-202ENST00000535689 SLC28A3Q9HAS3 691 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 PREBQ9HCU5 417 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 UBN1Q9NPG3 1134 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 DECR2Q9NUI1 292 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 AGTPBP1Q9UPW5 1226 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 CRYL1Q9Y2S2 319 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 PTPRFP10586 1907 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 RLFQ13129 1914 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 KAT6AQ92794 2004 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 MUC6Q6W4X9 2439 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 MYH13Q9UKX3 1938 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 SPTBN5Q9NRC6 3674 aaKnown RBP3.49□□□□□ -1.85
SNHG1-202ENST00000535689 PI4K2BG5E9Z4 385 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 CCNDBP1O95273 360 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 FGBP02675 491 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 PYGLP06737 847 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 CTSAP10619 480 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 CDK4P11802 303 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 ST6GAL1P15907 406 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 CYP2B6P20813 491 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 PRPH2P23942 346 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 CHMP24386 653 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 CNTFP26441 200 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 EPHB2P29323 1055 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 ALDH7A1P49419 539 aaKnown RBP3.49□□□□□ -1.85
SNHG1-202ENST00000535689 CLCNKBP51801 687 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 MVDP53602 400 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 CDH15P55291 814 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 IRX3P78415 501 aaPredicted RBP3.49□□□□□ -1.85
SNHG1-202ENST00000535689 PMPCAQ10713 525 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 GCKRQ14397 625 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 NAA25Q14CX7 972 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 MORN5Q5VZ52 161 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 SLC18B1Q6NT16 456 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 MTFR2Q6P444 385 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 C4orf50Q6ZRC1 276 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 NEK8Q86SG6 692 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 BRSK2Q8IWQ3 736 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 SCYL3Q8IZE3 742 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 VPS52Q8N1B4 723 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 CERS5Q8N5B7 392 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 FAM98AQ8NCA5 519 aaKnown RBP3.49□□□□□ -1.85
SNHG1-202ENST00000535689 DNAAF1Q8NEP3 725 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 BICD2Q8TD16 824 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 DENND1AQ8TEH3 1009 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 HSPH1Q92598 858 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 CNOT9Q92600 299 aaKnown RBP3.49□□□□□ -1.85
SNHG1-202ENST00000535689 BADQ92934 168 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 PLEKHF1Q96S99 279 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 SEZ6LQ9BYH1 1024 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 TTYH1Q9H313 450 aaPredicted RBP3.49□□□□□ -1.85
SNHG1-202ENST00000535689 ACTR5Q9H9F9 607 aaPredicted RBP3.49□□□□□ -1.85
SNHG1-202ENST00000535689 TXNRD2Q9NNW7 524 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 FZD3Q9NPG1 666 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 SLC22A11Q9NSA0 550 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 TMEM45AQ9NWC5 275 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 TMEM160Q9NX00 188 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 TUBA8Q9NY65 449 aaPredicted RBP3.49□□□□□ -1.85
SNHG1-202ENST00000535689 IL1RAPL1Q9NZN1 696 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 MORF4L1Q9UBU8 362 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 AGO2Q9UKV8 859 aaKnown RBP3.49□□□□□ -1.85
SNHG1-202ENST00000535689 ARHGAP26Q9UNA1 814 aa3.49□□□□□ -1.85
SNHG1-202ENST00000535689 MYH2Q9UKX2 1941 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 COL3A1P02461 1466 aaPredicted RBP3.48□□□□□ -1.85
SNHG1-202ENST00000535689 PFASO15067 1338 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 MROH7Q68CQ1 1323 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 MUC3AQ02505 3323 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 KIR2DS5A0A0G2JLQ3 304 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 C17orf113A0A1B0GUU1 675 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 NPIPB13A6NJU9 1138 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 LRRC3CA6NJW4 275 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms