RNA–Protein interactions for RNA: ENST00000535664.5

MSRB3-206, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-206ENST00000535664 SLC14A2Q15849 920 aa14.65□□□□□ -0.06
MSRB3-206ENST00000535664 PLPP6Q8IY26 295 aa14.65□□□□□ -0.06
MSRB3-206ENST00000535664 ZNF366Q8N895 744 aa14.65□□□□□ -0.06
MSRB3-206ENST00000535664 PDCD7Q8N8D1 485 aaKnown RBP14.65□□□□□ -0.06
MSRB3-206ENST00000535664 MCUQ8NE86 351 aa14.65□□□□□ -0.06
MSRB3-206ENST00000535664 SPATA22Q8NHS9 363 aa14.65□□□□□ -0.06
MSRB3-206ENST00000535664 FRS2Q8WU20 508 aa14.65□□□□□ -0.06
MSRB3-206ENST00000535664 HNRNPLLQ8WVV9 542 aaKnown RBP14.65□□□□□ -0.06
MSRB3-206ENST00000535664 VOPP1Q96AW1 172 aa14.65□□□□□ -0.06
MSRB3-206ENST00000535664 FAM129BQ96TA1 746 aa14.65□□□□□ -0.06
MSRB3-206ENST00000535664 FMO2Q99518 471 aa14.65□□□□□ -0.06
MSRB3-206ENST00000535664 TXLNGYQ9BZA5 131 aa14.65□□□□□ -0.06
MSRB3-206ENST00000535664 TMEM9BQ9NQ34 198 aa14.65□□□□□ -0.06
MSRB3-206ENST00000535664 FBXL12Q9NXK8 326 aa14.65□□□□□ -0.06
MSRB3-206ENST00000535664 TTLL3Q9Y4R7 772 aa14.65□□□□□ -0.06
MSRB3-206ENST00000535664 FRYLO94915 3013 aa14.65□□□□□ -0.06
MSRB3-206ENST00000535664 TTC24A2A3L6 582 aaPredicted RBP14.64□□□□□ -0.07
MSRB3-206ENST00000535664 ERI2A8K979 691 aaKnown RBP14.64□□□□□ -0.07
MSRB3-206ENST00000535664 E7ESA3 106 aa14.64□□□□□ -0.07
MSRB3-206ENST00000535664 ANXA9O76027 345 aa14.64□□□□□ -0.07
MSRB3-206ENST00000535664 NEBLO76041 1014 aa14.64□□□□□ -0.07
MSRB3-206ENST00000535664 MT-CYBP00156 380 aaPredicted RBP14.64□□□□□ -0.07
MSRB3-206ENST00000535664 IL1BP01584 269 aa14.64□□□□□ -0.07
MSRB3-206ENST00000535664 APRTP07741 180 aa14.64□□□□□ -0.07
MSRB3-206ENST00000535664 ADRA1AP35348 466 aa14.64□□□□□ -0.07
MSRB3-206ENST00000535664 GRIA1P42261 906 aa14.64□□□□□ -0.07
MSRB3-206ENST00000535664 MAGEA3P43357 314 aa14.64□□□□□ -0.07
MSRB3-206ENST00000535664 CDK16Q00536 496 aa14.64□□□□□ -0.07
MSRB3-206ENST00000535664 NSUN2Q08J23 767 aaKnown RBP eCLIP14.64□□□□□ -0.07
MSRB3-206ENST00000535664 STPG1Q5TH74 334 aa14.64□□□□□ -0.07
MSRB3-206ENST00000535664 ARMCX6Q7L4S7 300 aa14.64□□□□□ -0.07
MSRB3-206ENST00000535664 CAND1Q86VP6 1230 aaKnown RBP14.64□□□□□ -0.07
MSRB3-206ENST00000535664 MMAAQ8IVH4 418 aaKnown RBP14.64□□□□□ -0.07
MSRB3-206ENST00000535664 SLC41A1Q8IVJ1 513 aa14.64□□□□□ -0.07
MSRB3-206ENST00000535664 BBS5Q8N3I7 341 aa14.64□□□□□ -0.07
MSRB3-206ENST00000535664 CAVIN3Q969G5 261 aa14.64□□□□□ -0.07
MSRB3-206ENST00000535664 ISG20Q96AZ6 181 aaKnown RBP14.64□□□□□ -0.07
MSRB3-206ENST00000535664 SKA1Q96BD8 255 aa14.64□□□□□ -0.07
MSRB3-206ENST00000535664 EXOC2Q96KP1 924 aa14.64□□□□□ -0.07
MSRB3-206ENST00000535664 MRGPRX2Q96LB1 330 aa14.64□□□□□ -0.07
MSRB3-206ENST00000535664 PPP1R2P1Q96PQ5 205 aa14.64□□□□□ -0.07
MSRB3-206ENST00000535664 NUDCD1Q96RS6 583 aa14.64□□□□□ -0.07
MSRB3-206ENST00000535664 RBM15Q96T37 977 aaKnown RBP eCLIP14.64□□□□□ -0.07
MSRB3-206ENST00000535664 SEMA3CQ99985 751 aa14.64□□□□□ -0.07
MSRB3-206ENST00000535664 EDEM2Q9BV94 578 aa14.64□□□□□ -0.07
MSRB3-206ENST00000535664 FOXP3Q9BZS1 431 aa14.64□□□□□ -0.07
MSRB3-206ENST00000535664 PHACTR1Q9C0D0 580 aa14.64□□□□□ -0.07
MSRB3-206ENST00000535664 CFAP54Q96N23 3096 aa14.64□□□□□ -0.07
MSRB3-206ENST00000535664 THADAQ6YHU6 1953 aa14.64□□□□□ -0.07
MSRB3-206ENST00000535664 LNP1A1A4G5 178 aa14.63□□□□□ -0.07
MSRB3-206ENST00000535664 DYNC1I1O14576 645 aa14.63□□□□□ -0.07
MSRB3-206ENST00000535664 PPFIA2O75334 1257 aa14.63□□□□□ -0.07
MSRB3-206ENST00000535664 PRNPP04156 253 aa14.63□□□□□ -0.07
MSRB3-206ENST00000535664 CFIP05156 583 aa14.63□□□□□ -0.07
MSRB3-206ENST00000535664 CD86P42081 329 aa14.63□□□□□ -0.07
MSRB3-206ENST00000535664 CSNK1DP48730 415 aa14.63□□□□□ -0.07
MSRB3-206ENST00000535664 GEMP55040 296 aa14.63□□□□□ -0.07
MSRB3-206ENST00000535664 RHOAP61586 193 aa14.63□□□□□ -0.07
MSRB3-206ENST00000535664 IRX4P78413 519 aa14.63□□□□□ -0.07
MSRB3-206ENST00000535664 MPP3Q13368 585 aa14.63□□□□□ -0.07
MSRB3-206ENST00000535664 OLIG2Q13516 323 aa14.63□□□□□ -0.07
MSRB3-206ENST00000535664 PRPSAP1Q14558 356 aa14.63□□□□□ -0.07
MSRB3-206ENST00000535664 CCDC6Q16204 474 aa14.63□□□□□ -0.07
MSRB3-206ENST00000535664 BEND6Q5SZJ8 279 aaPredicted RBP14.63□□□□□ -0.07
MSRB3-206ENST00000535664 FNBP1LQ5T0N5 605 aa14.63□□□□□ -0.07
MSRB3-206ENST00000535664 C22orf39Q6P5X5 142 aa14.63□□□□□ -0.07
MSRB3-206ENST00000535664 EMBQ6PCB8 327 aa14.63□□□□□ -0.07
MSRB3-206ENST00000535664 NCEH1Q6PIU2 408 aa14.63□□□□□ -0.07
MSRB3-206ENST00000535664 IL27RAQ6UWB1 636 aa14.63□□□□□ -0.07
MSRB3-206ENST00000535664 STK40Q8N2I9 435 aa14.63□□□□□ -0.07
MSRB3-206ENST00000535664 AGGF1Q8N302 714 aaeCLIP14.63□□□□□ -0.07
MSRB3-206ENST00000535664 PCDH20Q8N6Y1 951 aaKnown RBP14.63□□□□□ -0.07
MSRB3-206ENST00000535664 TMIEQ8NEW7 156 aa14.63□□□□□ -0.07
MSRB3-206ENST00000535664 OR2T34Q8NGX1 318 aa14.63□□□□□ -0.07
MSRB3-206ENST00000535664 ERLEC1Q96DZ1 483 aa14.63□□□□□ -0.07
MSRB3-206ENST00000535664 LRIG1Q96JA1 1093 aa14.63□□□□□ -0.07
MSRB3-206ENST00000535664 SERPINB12Q96P63 405 aa14.63□□□□□ -0.07
MSRB3-206ENST00000535664 WDR83Q9BRX9 315 aaKnown RBP14.63□□□□□ -0.07
MSRB3-206ENST00000535664 LRRC40Q9H9A6 602 aa14.63□□□□□ -0.07
MSRB3-206ENST00000535664 NOD2Q9HC29 1040 aa14.63□□□□□ -0.07
MSRB3-206ENST00000535664 TMEM74BQ9NUR3 256 aa14.63□□□□□ -0.07
MSRB3-206ENST00000535664 UBP1Q9NZI7 540 aa14.63□□□□□ -0.07
MSRB3-206ENST00000535664 MTRF1LQ9UGC7 380 aaKnown RBP14.63□□□□□ -0.07
MSRB3-206ENST00000535664 PPM1HQ9ULR3 514 aa14.63□□□□□ -0.07
MSRB3-206ENST00000535664 AAR2Q9Y312 384 aaKnown RBP14.63□□□□□ -0.07
MSRB3-206ENST00000535664 E7EVH7 732 aa14.62□□□□□ -0.07
MSRB3-206ENST00000535664 GOLGA8MH3BSY2 632 aa14.62□□□□□ -0.07
MSRB3-206ENST00000535664 BCAT2O15382 392 aaPredicted RBP14.62□□□□□ -0.07
MSRB3-206ENST00000535664 INSIG1O15503 277 aa14.62□□□□□ -0.07
MSRB3-206ENST00000535664 PSMD3O43242 534 aa14.62□□□□□ -0.07
MSRB3-206ENST00000535664 ERLIN1O75477 346 aa14.62□□□□□ -0.07
MSRB3-206ENST00000535664 RNASEH2AO75792 299 aaKnown RBP14.62□□□□□ -0.07
MSRB3-206ENST00000535664 GSRP00390 522 aa14.62□□□□□ -0.07
MSRB3-206ENST00000535664 MLNP12872 115 aa14.62□□□□□ -0.07
MSRB3-206ENST00000535664 CD27P26842 260 aa14.62□□□□□ -0.07
MSRB3-206ENST00000535664 ACSL1P33121 698 aa14.62□□□□□ -0.07
MSRB3-206ENST00000535664 WNT3AP56704 352 aa14.62□□□□□ -0.07
MSRB3-206ENST00000535664 ITKQ08881 620 aa14.62□□□□□ -0.07
MSRB3-206ENST00000535664 SPARCL1Q14515 664 aa14.62□□□□□ -0.07
MSRB3-206ENST00000535664 TEAD4Q15561 434 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms