RNA–Protein interactions for RNA: ENST00000533350.1

PICALM-221, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 3

Gene PICALM, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-221	ENST00000533350	ZNF778	Q96MU6	729 aa		4.63	□□□□□ -1.67
PICALM-221	ENST00000533350	MAP7D2	Q96T17	732 aa		4.63	□□□□□ -1.67
PICALM-221	ENST00000533350	ITPA	Q9BY32	194 aa		4.63	□□□□□ -1.67
PICALM-221	ENST00000533350	PLAC1	Q9HBJ0	212 aa		4.63	□□□□□ -1.67
PICALM-221	ENST00000533350	GPR108	Q9NPR9	543 aa		4.63	□□□□□ -1.67
PICALM-221	ENST00000533350	PLK2	Q9NYY3	685 aa		4.63	□□□□□ -1.67
PICALM-221	ENST00000533350	IL36RN	Q9UBH0	155 aa		4.63	□□□□□ -1.67
PICALM-221	ENST00000533350	RCOR1	Q9UKL0	485 aa		4.63	□□□□□ -1.67
PICALM-221	ENST00000533350	MTMR6	Q9Y217	621 aa		4.63	□□□□□ -1.67
PICALM-221	ENST00000533350	LY6G6E	A0A0G2JKS1	128 aa		4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	TNFRSF13B	O14836	293 aa	Predicted RBP	4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	TGFB1I1	O43294	461 aa		4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	NDUFS3	O75489	264 aa		4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	BMP15	O95972	392 aa		4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	MMP2	P08253	660 aa		4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	ZNF182	P17025	639 aa	Predicted RBP	4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	THPO	P40225	353 aa		4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	NR4A2	P43354	598 aa		4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	CEBPZ	Q03701	1054 aa	Known RBP	4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	ST3GAL1	Q11201	340 aa		4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	OLIG2	Q13516	323 aa		4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	NAE1	Q13564	534 aa		4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	RILPL1	Q5EBL4	403 aa		4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	COLEC12	Q5KU26	742 aa		4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	KLHL35	Q6PF15	583 aa		4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	NCEH1	Q6PIU2	408 aa		4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	FBXO46	Q6PJ61	603 aa	Predicted RBP	4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	TMED8	Q6PL24	325 aa	Predicted RBP	4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	FASTKD5	Q7L8L6	764 aa	Known RBP	4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	SHF	Q7M4L6	423 aa		4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	PCGF5	Q86SE9	256 aa		4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	DSEL	Q8IZU8	1212 aa		4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	TTC39C	Q8N584	583 aa		4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	HUS1B	Q8NHY5	278 aa		4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	GPT2	Q8TD30	523 aa		4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	TRIB2	Q92519	343 aa		4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	MMAB	Q96EY8	250 aa	Predicted RBP	4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	TXNDC15	Q96J42	360 aa		4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	TMEM68	Q96MH6	324 aa		4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	CMTM3	Q96MX0	182 aa		4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	TREX2	Q9BQ50	279 aa	Predicted RBP	4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	TMEM47	Q9BQJ4	181 aa		4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	MAK16	Q9BXY0	300 aa	Known RBP	4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	IFIH1	Q9BYX4	1025 aa	Known RBP	4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	NDST4	Q9H3R1	872 aa		4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	MUC13	Q9H3R2	512 aa		4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	SLC28A3	Q9HAS3	691 aa		4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	ZBTB40	Q9NUA8	1239 aa		4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	OR6C3	Q9NZP0	311 aa		4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	VPS28	Q9UK41	221 aa		4.62	□□□□□ -1.67
PICALM-221	ENST00000533350	MAU2	Q9Y6X3	613 aa		4.62	□□□□□ -1.67
PICALM-221	ENST00000533350		A0A0U1RQF3	1178 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350		A0A1W2PRG0	241 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	LIPT2	A6NK58	231 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	OR6C75	A6NL08	312 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	BECN2	A8MW95	431 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	LDB2	O43679	373 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	PAGE4	O60829	102 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	TSPAN9	O75954	239 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	GFPT2	O94808	682 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	MLYCD	O95822	493 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	CLTB	P09497	229 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	RARG	P13631	454 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	ALOX12	P18054	663 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	CHAT	P28329	748 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	CXCR3	P49682	368 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	NUDT6	P53370	316 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	PMS2	P54278	862 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	SNX16	P57768	344 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	ROR2	Q01974	943 aa	Known RBP	4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	PRKG2	Q13237	762 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	LAMB3	Q13751	1172 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	MYBPC2	Q14324	1141 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	ZNF284	Q2VY69	593 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	C11orf87	Q6NUJ2	197 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	SARM1	Q6SZW1	724 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350		Q6ZSV7	163 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	IRF2BP2	Q7Z5L9	587 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	SLC35F3	Q8IY50	421 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	OR14A16	Q8NHC5	309 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	ARRDC2	Q8TBH0	407 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	ERGIC1	Q969X5	290 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	PERP	Q96FX8	193 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	FCRL4	Q96PJ5	515 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	MMTAG2	Q9BU76	263 aa	Known RBP	4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	STRA6	Q9BX79	667 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	GLIS2	Q9BZE0	524 aa	Predicted RBP	4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	SWAP70	Q9UH65	585 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	ZNF215	Q9UL58	517 aa	Predicted RBP	4.61	□□□□□ -1.67
PICALM-221	ENST00000533350	PTGDR2	Q9Y5Y4	395 aa		4.61	□□□□□ -1.67
PICALM-221	ENST00000533350		A0A1B0GVM2	712 aa		4.6	□□□□□ -1.67
PICALM-221	ENST00000533350	DYTN	A2CJ06	578 aa		4.6	□□□□□ -1.67
PICALM-221	ENST00000533350		A6NCN8	305 aa		4.6	□□□□□ -1.67
PICALM-221	ENST00000533350		I6L893	689 aa	Predicted RBP	4.6	□□□□□ -1.67
PICALM-221	ENST00000533350	IFNL4	K9M1U5	179 aa		4.6	□□□□□ -1.67
PICALM-221	ENST00000533350	SPRY3	O43610	288 aa		4.6	□□□□□ -1.67
PICALM-221	ENST00000533350	DOK2	O60496	412 aa		4.6	□□□□□ -1.67
PICALM-221	ENST00000533350	PTP4A3	O75365	173 aa		4.6	□□□□□ -1.67
PICALM-221	ENST00000533350	TMEM11	P17152	192 aa		4.6	□□□□□ -1.67
PICALM-221	ENST00000533350	CDH2	P19022	906 aa	Predicted RBP	4.6	□□□□□ -1.67

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