RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 C1QTNF9BB2RNN3 333 aa16.74■□□□□ 0.27
PKP3-209ENST00000533069 MATN3O15232 486 aa16.74■□□□□ 0.27
PKP3-209ENST00000533069 KIF5CO60282 957 aa16.74■□□□□ 0.27
PKP3-209ENST00000533069 ZNF500O60304 480 aaPredicted RBP16.74■□□□□ 0.27
PKP3-209ENST00000533069 RFPL3O75679 317 aa16.74■□□□□ 0.27
PKP3-209ENST00000533069 CPP00450 1065 aa16.74■□□□□ 0.27
PKP3-209ENST00000533069 ELFN1P0C7U0 828 aa16.74■□□□□ 0.27
PKP3-209ENST00000533069 C1QTNF9P0C862 333 aa16.74■□□□□ 0.27
PKP3-209ENST00000533069 CKMT2P17540 419 aa16.74■□□□□ 0.27
PKP3-209ENST00000533069 CCNCP24863 283 aa16.74■□□□□ 0.27
PKP3-209ENST00000533069 ACADVLP49748 655 aa16.74■□□□□ 0.27
PKP3-209ENST00000533069 PEX5P50542 639 aa16.74■□□□□ 0.27
PKP3-209ENST00000533069 PROX2Q3B8N5 592 aa16.74■□□□□ 0.27
PKP3-209ENST00000533069 MACC1Q6ZN28 852 aa16.74■□□□□ 0.27
PKP3-209ENST00000533069 PQLC3Q8N755 202 aa16.74■□□□□ 0.27
PKP3-209ENST00000533069 TRIM58Q8NG06 486 aa16.74■□□□□ 0.27
PKP3-209ENST00000533069 RAPGEF5Q92565 580 aa16.74■□□□□ 0.27
PKP3-209ENST00000533069 MAML1Q92585 1016 aa16.74■□□□□ 0.27
PKP3-209ENST00000533069 TSGA13Q96PP4 275 aa16.74■□□□□ 0.27
PKP3-209ENST00000533069 RNF157Q96PX1 679 aa16.74■□□□□ 0.27
PKP3-209ENST00000533069 ALS2CR12Q96Q35 445 aa16.74■□□□□ 0.27
PKP3-209ENST00000533069 DUSP23Q9BVJ7 150 aa16.74■□□□□ 0.27
PKP3-209ENST00000533069 POLR1EQ9GZS1 481 aaKnown RBP16.74■□□□□ 0.27
PKP3-209ENST00000533069 NOD2Q9HC29 1040 aa16.74■□□□□ 0.27
PKP3-209ENST00000533069 MBNL1Q9NR56 388 aaKnown RBP16.74■□□□□ 0.27
PKP3-209ENST00000533069 UCKL1Q9NWZ5 548 aa16.74■□□□□ 0.27
PKP3-209ENST00000533069 NLGN3Q9NZ94 848 aa16.74■□□□□ 0.27
PKP3-209ENST00000533069 PCDHGC4Q9Y5F7 938 aa16.74■□□□□ 0.27
PKP3-209ENST00000533069 CSNK1G3Q9Y6M4 447 aa16.74■□□□□ 0.27
PKP3-209ENST00000533069 EPG5Q9HCE0 2579 aa16.73■□□□□ 0.27
PKP3-209ENST00000533069 SIGLEC6O43699 453 aa16.73■□□□□ 0.27
PKP3-209ENST00000533069 PRKCGP05129 697 aa16.73■□□□□ 0.27
PKP3-209ENST00000533069 CES1P23141 567 aa16.73■□□□□ 0.27
PKP3-209ENST00000533069 MAXP61244 160 aa16.73■□□□□ 0.27
PKP3-209ENST00000533069 GBE1Q04446 702 aa16.73■□□□□ 0.27
PKP3-209ENST00000533069 RALGDSQ12967 914 aa16.73■□□□□ 0.27
PKP3-209ENST00000533069 DNAJC3Q13217 504 aa16.73■□□□□ 0.27
PKP3-209ENST00000533069 SMAD1Q15797 465 aaKnown RBP16.73■□□□□ 0.27
PKP3-209ENST00000533069 WSCD2Q2TBF2 565 aa16.73■□□□□ 0.27
PKP3-209ENST00000533069 ODF2Q5BJF6 829 aa16.73■□□□□ 0.27
PKP3-209ENST00000533069 ZNF542PQ5EBM4 170 aa16.73■□□□□ 0.27
PKP3-209ENST00000533069 TPRG1LQ5T0D9 272 aa16.73■□□□□ 0.27
PKP3-209ENST00000533069 CCNI2Q6ZMN8 369 aaPredicted RBP16.73■□□□□ 0.27
PKP3-209ENST00000533069 RHOT1Q8IXI2 618 aa16.73■□□□□ 0.27
PKP3-209ENST00000533069 SYCE1Q8N0S2 351 aa16.73■□□□□ 0.27
PKP3-209ENST00000533069 KDF1Q8NAX2 398 aaPredicted RBP16.73■□□□□ 0.27
PKP3-209ENST00000533069 ZNF548Q8NEK5 533 aaPredicted RBP16.73■□□□□ 0.27
PKP3-209ENST00000533069 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.73■□□□□ 0.27
PKP3-209ENST00000533069 HDAC11Q96DB2 347 aa16.73■□□□□ 0.27
PKP3-209ENST00000533069 TBATAQ96M53 351 aa16.73■□□□□ 0.27
PKP3-209ENST00000533069 NSMCE3Q96MG7 304 aa16.73■□□□□ 0.27
PKP3-209ENST00000533069 USP29Q9HBJ7 922 aa16.73■□□□□ 0.27
PKP3-209ENST00000533069 NT5MQ9NPB1 228 aa16.73■□□□□ 0.27
PKP3-209ENST00000533069 LZTFL1Q9NQ48 299 aa16.73■□□□□ 0.27
PKP3-209ENST00000533069 EVA1BQ9NVM1 165 aa16.73■□□□□ 0.27
PKP3-209ENST00000533069 DDX56Q9NY93 547 aaKnown RBP16.73■□□□□ 0.27
PKP3-209ENST00000533069 COQ6Q9Y2Z9 468 aa16.73■□□□□ 0.27
PKP3-209ENST00000533069 KNL1Q8NG31 2342 aa16.73■□□□□ 0.27
PKP3-209ENST00000533069 FRYQ5TBA9 3013 aa16.72■□□□□ 0.27
PKP3-209ENST00000533069 TTC24A2A3L6 582 aaPredicted RBP16.72■□□□□ 0.27
PKP3-209ENST00000533069 TRIM38O00635 465 aa16.72■□□□□ 0.27
PKP3-209ENST00000533069 SCAMP1O15126 338 aa16.72■□□□□ 0.27
PKP3-209ENST00000533069 FFAR2O15552 330 aa16.72■□□□□ 0.27
PKP3-209ENST00000533069 NEBLO76041 1014 aa16.72■□□□□ 0.27
PKP3-209ENST00000533069 KRT1P04264 644 aa16.72■□□□□ 0.27
PKP3-209ENST00000533069 KRT10P13645 584 aa16.72■□□□□ 0.27
PKP3-209ENST00000533069 ZFXP17010 805 aaPredicted RBP16.72■□□□□ 0.27
PKP3-209ENST00000533069 JUNDP17535 347 aa16.72■□□□□ 0.27
PKP3-209ENST00000533069 ACP1P24666 158 aa16.72■□□□□ 0.27
PKP3-209ENST00000533069 HTR1BP28222 390 aa16.72■□□□□ 0.27
PKP3-209ENST00000533069 TRAF2Q12933 501 aa16.72■□□□□ 0.27
PKP3-209ENST00000533069 EIF2B5Q13144 721 aaKnown RBP16.72■□□□□ 0.27
PKP3-209ENST00000533069 MTM1Q13496 603 aa16.72■□□□□ 0.27
PKP3-209ENST00000533069 CCDC157Q569K6 752 aa16.72■□□□□ 0.27
PKP3-209ENST00000533069 ALG1LQ6GMV1 187 aa16.72■□□□□ 0.27
PKP3-209ENST00000533069 LIPIQ6XZB0 460 aa16.72■□□□□ 0.27
PKP3-209ENST00000533069 TMPRSS12Q86WS5 348 aa16.72■□□□□ 0.27
PKP3-209ENST00000533069 ATL2Q8NHH9 583 aa16.72■□□□□ 0.27
PKP3-209ENST00000533069 PDCD6IPQ8WUM4 868 aaKnown RBP16.72■□□□□ 0.27
PKP3-209ENST00000533069 SEMA3CQ99985 751 aa16.72■□□□□ 0.27
PKP3-209ENST00000533069 MAK16Q9BXY0 300 aaKnown RBP16.72■□□□□ 0.27
PKP3-209ENST00000533069 LACRTQ9GZZ8 138 aa16.72■□□□□ 0.27
PKP3-209ENST00000533069 TRMT1Q9NXH9 659 aaKnown RBP16.72■□□□□ 0.27
PKP3-209ENST00000533069 KCTD5Q9NXV2 234 aa16.72■□□□□ 0.27
PKP3-209ENST00000533069 DTLQ9NZJ0 730 aa16.72■□□□□ 0.27
PKP3-209ENST00000533069 SPASTQ9UBP0 616 aa16.72■□□□□ 0.27
PKP3-209ENST00000533069 B4GALT6Q9UBX8 382 aa16.72■□□□□ 0.27
PKP3-209ENST00000533069 PHTF1Q9UMS5 762 aa16.72■□□□□ 0.27
PKP3-209ENST00000533069 GUCA1BQ9UMX6 200 aa16.72■□□□□ 0.27
PKP3-209ENST00000533069 TPRP12270 2363 aaKnown RBP16.72■□□□□ 0.27
PKP3-209ENST00000533069 TP53BP1Q12888 1972 aaPredicted RBP16.71■□□□□ 0.27
PKP3-209ENST00000533069 C3orf70A6NLC5 250 aaPredicted RBP16.71■□□□□ 0.27
PKP3-209ENST00000533069 AQP9O43315 295 aa16.71■□□□□ 0.27
PKP3-209ENST00000533069 SPOPO43791 374 aa16.71■□□□□ 0.27
PKP3-209ENST00000533069 RECQL5O94762 991 aaPredicted RBP16.71■□□□□ 0.27
PKP3-209ENST00000533069 PGLSO95336 258 aa16.71■□□□□ 0.27
PKP3-209ENST00000533069 MAP3K6O95382 1288 aa16.71■□□□□ 0.27
PKP3-209ENST00000533069 CYP2A6P11509 494 aaPredicted RBP16.71■□□□□ 0.27
PKP3-209ENST00000533069 CA4P22748 312 aa16.71■□□□□ 0.27
PKP3-209ENST00000533069 VIPR1P32241 457 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms