RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 PRAMEF10O60809 474 aa17.44■□□□□ 0.38
PKP3-208ENST00000531857 FAM87AP0C7U9 286 aa17.44■□□□□ 0.38
PKP3-208ENST00000531857 ITGB6P18564 788 aa17.44■□□□□ 0.38
PKP3-208ENST00000531857 MSNP26038 577 aaKnown RBP17.44■□□□□ 0.38
PKP3-208ENST00000531857 EPHB2P29323 1055 aa17.44■□□□□ 0.38
PKP3-208ENST00000531857 RFC1P35251 1148 aaPredicted RBP17.44■□□□□ 0.38
PKP3-208ENST00000531857 LIG3P49916 1009 aa17.44■□□□□ 0.38
PKP3-208ENST00000531857 CSRP3P50461 194 aa17.44■□□□□ 0.38
PKP3-208ENST00000531857 SUOXP51687 545 aa17.44■□□□□ 0.38
PKP3-208ENST00000531857 CDR2Q01850 454 aa17.44■□□□□ 0.38
PKP3-208ENST00000531857 ZFP36L1Q07352 338 aaKnown RBP17.44■□□□□ 0.38
PKP3-208ENST00000531857 PTP4A2Q12974 167 aa17.44■□□□□ 0.38
PKP3-208ENST00000531857 SERINC3Q13530 473 aa17.44■□□□□ 0.38
PKP3-208ENST00000531857 TMPRSS9Q7Z410 1059 aa17.44■□□□□ 0.38
PKP3-208ENST00000531857 SLFN11Q7Z7L1 901 aa17.44■□□□□ 0.38
PKP3-208ENST00000531857 ZFAND4Q86XD8 727 aa17.44■□□□□ 0.38
PKP3-208ENST00000531857 NTAN1Q96AB6 310 aa17.44■□□□□ 0.38
PKP3-208ENST00000531857 MRFAP1L1Q96HT8 127 aa17.44■□□□□ 0.38
PKP3-208ENST00000531857 WDR92Q96MX6 357 aa17.44■□□□□ 0.38
PKP3-208ENST00000531857 NCAPGQ9BPX3 1015 aa17.44■□□□□ 0.38
PKP3-208ENST00000531857 ARHGAP9Q9BRR9 750 aa17.44■□□□□ 0.38
PKP3-208ENST00000531857 SUV39H2Q9H5I1 410 aa17.44■□□□□ 0.38
PKP3-208ENST00000531857 MRPL40Q9NQ50 206 aaKnown RBP17.44■□□□□ 0.38
PKP3-208ENST00000531857 STARD5Q9NSY2 213 aa17.44■□□□□ 0.38
PKP3-208ENST00000531857 FOXJ2Q9P0K8 574 aa17.44■□□□□ 0.38
PKP3-208ENST00000531857 SPTA1P02549 2419 aa17.44■□□□□ 0.38
PKP3-208ENST00000531857 TMEM202A6NGA9 273 aa17.43■□□□□ 0.38
PKP3-208ENST00000531857 TNFP01375 233 aa17.43■□□□□ 0.38
PKP3-208ENST00000531857 ITGB2P05107 769 aa17.43■□□□□ 0.38
PKP3-208ENST00000531857 KRT3P12035 628 aa17.43■□□□□ 0.38
PKP3-208ENST00000531857 GLB1P16278 677 aa17.43■□□□□ 0.38
PKP3-208ENST00000531857 WT1P19544 449 aaPredicted RBP17.43■□□□□ 0.38
PKP3-208ENST00000531857 MMP12P39900 470 aa17.43■□□□□ 0.38
PKP3-208ENST00000531857 AGERQ15109 404 aa17.43■□□□□ 0.38
PKP3-208ENST00000531857 DPCR1Q3MIW9 517 aa17.43■□□□□ 0.38
PKP3-208ENST00000531857 CERCAMQ5T4B2 595 aa17.43■□□□□ 0.38
PKP3-208ENST00000531857 OGFOD3Q6PK18 319 aa17.43■□□□□ 0.38
PKP3-208ENST00000531857 SPRED1Q7Z699 444 aa17.43■□□□□ 0.38
PKP3-208ENST00000531857 LUZP1Q86V48 1076 aa17.43■□□□□ 0.38
PKP3-208ENST00000531857 ZNF677Q86XU0 584 aa17.43■□□□□ 0.38
PKP3-208ENST00000531857 OR6C4Q8NGE1 309 aa17.43■□□□□ 0.38
PKP3-208ENST00000531857 HCAR2Q8TDS4 363 aa17.43■□□□□ 0.38
PKP3-208ENST00000531857 OR1E3Q8WZA6 343 aa17.43■□□□□ 0.38
PKP3-208ENST00000531857 FUBP1Q96AE4 644 aaKnown RBP17.43■□□□□ 0.38
PKP3-208ENST00000531857 GANQ9H2C0 597 aa17.43■□□□□ 0.38
PKP3-208ENST00000531857 APPL1Q9UKG1 709 aa17.43■□□□□ 0.38
PKP3-208ENST00000531857 PCDHGA4Q9Y5G9 962 aa17.43■□□□□ 0.38
PKP3-208ENST00000531857 DGKBQ9Y6T7 804 aa17.43■□□□□ 0.38
PKP3-208ENST00000531857 RNF215Q9Y6U7 377 aa17.43■□□□□ 0.38
PKP3-208ENST00000531857 PTPN13Q12923 2485 aa17.43■□□□□ 0.38
PKP3-208ENST00000531857 TERTO14746 1132 aaKnown RBP17.42■□□□□ 0.38
PKP3-208ENST00000531857 GPD1P21695 349 aa17.42■□□□□ 0.38
PKP3-208ENST00000531857 ERCC5P28715 1186 aaPredicted RBP17.42■□□□□ 0.38
PKP3-208ENST00000531857 KLK7P49862 253 aa17.42■□□□□ 0.38
PKP3-208ENST00000531857 YBEYP58557 167 aaPredicted RBP17.42■□□□□ 0.38
PKP3-208ENST00000531857 CYP4F2P78329 520 aa17.42■□□□□ 0.38
PKP3-208ENST00000531857 MTM1Q13496 603 aa17.42■□□□□ 0.38
PKP3-208ENST00000531857 MANEAQ5SRI9 462 aa17.42■□□□□ 0.38
PKP3-208ENST00000531857 WDR59Q6PJI9 974 aa17.42■□□□□ 0.38
PKP3-208ENST00000531857 TAF8Q7Z7C8 310 aa17.42■□□□□ 0.38
PKP3-208ENST00000531857 DNAAF5Q86Y56 855 aa17.42■□□□□ 0.38
PKP3-208ENST00000531857 CAMK1DQ8IU85 385 aa17.42■□□□□ 0.38
PKP3-208ENST00000531857 FAM46DQ8NEK8 389 aa17.42■□□□□ 0.38
PKP3-208ENST00000531857 CCL4L1Q8NHW4 92 aa17.42■□□□□ 0.38
PKP3-208ENST00000531857 USP7Q93009 1102 aa17.42■□□□□ 0.38
PKP3-208ENST00000531857 PCDHB18PQ96TA0 734 aa17.42■□□□□ 0.38
PKP3-208ENST00000531857 TRIM5Q9C035 493 aa17.42■□□□□ 0.38
PKP3-208ENST00000531857 PDFQ9HBH1 243 aa17.42■□□□□ 0.38
PKP3-208ENST00000531857 FGF22Q9HCT0 170 aa17.42■□□□□ 0.38
PKP3-208ENST00000531857 SAMSN1Q9NSI8 373 aaKnown RBP17.42■□□□□ 0.38
PKP3-208ENST00000531857 ZFC3H1O60293 1989 aaKnown RBP17.41■□□□□ 0.38
PKP3-208ENST00000531857 C9orf172C9J069 976 aa17.41■□□□□ 0.38
PKP3-208ENST00000531857 J3KR12 359 aa17.41■□□□□ 0.38
PKP3-208ENST00000531857 CBFA2T2O43439 604 aa17.41■□□□□ 0.38
PKP3-208ENST00000531857 CREB3O43889 395 aa17.41■□□□□ 0.38
PKP3-208ENST00000531857 UNGP13051 313 aaPredicted RBP17.41■□□□□ 0.38
PKP3-208ENST00000531857 RGRP47804 291 aa17.41■□□□□ 0.38
PKP3-208ENST00000531857 MAPK10P53779 464 aa17.41■□□□□ 0.38
PKP3-208ENST00000531857 TBR1Q16650 682 aa17.41■□□□□ 0.38
PKP3-208ENST00000531857 PARP15Q460N3 678 aa17.41■□□□□ 0.38
PKP3-208ENST00000531857 EFHC2Q5JST6 749 aa17.41■□□□□ 0.38
PKP3-208ENST00000531857 ERAP2Q6P179 960 aa17.41■□□□□ 0.38
PKP3-208ENST00000531857 SCYL2Q6P3W7 929 aa17.41■□□□□ 0.38
PKP3-208ENST00000531857 XKR5Q6UX68 686 aa17.41■□□□□ 0.38
PKP3-208ENST00000531857 SLITRK4Q8IW52 837 aa17.41■□□□□ 0.38
PKP3-208ENST00000531857 UMODL1-AS1Q8N2C9 162 aa17.41■□□□□ 0.38
PKP3-208ENST00000531857 OR56A4Q8NGH8 313 aa17.41■□□□□ 0.38
PKP3-208ENST00000531857 ATL2Q8NHH9 583 aa17.41■□□□□ 0.38
PKP3-208ENST00000531857 TMEM168Q9H0V1 697 aa17.41■□□□□ 0.38
PKP3-208ENST00000531857 SEMA6CQ9H3T2 930 aa17.41■□□□□ 0.38
PKP3-208ENST00000531857 SEPT10Q9P0V9 454 aa17.41■□□□□ 0.38
PKP3-208ENST00000531857 LRIT1Q9P2V4 623 aa17.41■□□□□ 0.38
PKP3-208ENST00000531857 UBA2Q9UBT2 640 aaPredicted RBP17.41■□□□□ 0.38
PKP3-208ENST00000531857 ATP8A1Q9Y2Q0 1164 aa17.41■□□□□ 0.38
PKP3-208ENST00000531857 COL12A1Q99715 3063 aa17.41■□□□□ 0.38
PKP3-208ENST00000531857 WASH4PA8MWX3 477 aa17.4■□□□□ 0.38
PKP3-208ENST00000531857 B4DGG1 531 aa17.4■□□□□ 0.38
PKP3-208ENST00000531857 EPHB6O15197 1021 aa17.4■□□□□ 0.38
PKP3-208ENST00000531857 CCP110O43303 1012 aa17.4■□□□□ 0.38
PKP3-208ENST00000531857 SUV39H1O43463 412 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms