RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 TRAF1Q13077 416 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 TRIM29Q14134 588 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 BECN1Q14457 450 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 PPP2R5AQ15172 486 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 PWP2Q15269 919 aaKnown RBP3.23□□□□□ -1.89
CSDE1-208ENST00000524652 STXBP2Q15833 593 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 CNGA3Q16281 694 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 UGCGQ16739 394 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 KIAA0753Q2KHM9 967 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 HSDL1Q3SXM5 330 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 CCSAPQ6IQ19 270 aaPredicted RBP3.23□□□□□ -1.89
CSDE1-208ENST00000524652 RFX8Q6ZV50 586 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 PLA2G4DQ86XP0 818 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 UEVLDQ8IX04 471 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 FAM177A1Q8N128 213 aaPredicted RBP3.23□□□□□ -1.89
CSDE1-208ENST00000524652 BICD2Q8TD16 824 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 PRR11Q96HE9 360 aaPredicted RBP3.23□□□□□ -1.89
CSDE1-208ENST00000524652 MTMR9Q96QG7 549 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 CTAGE1Q96RT6 745 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 IWS1Q96ST2 819 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 PCYT2Q99447 389 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 SENP7Q9BQF6 1050 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 GATA5Q9BWX5 397 aaPredicted RBP3.23□□□□□ -1.89
CSDE1-208ENST00000524652 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.23□□□□□ -1.899e-6■■□□□ 13.2
CSDE1-208ENST00000524652 UNC45AQ9H3U1 944 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 HEYLQ9NQ87 328 aaPredicted RBP3.23□□□□□ -1.89
CSDE1-208ENST00000524652 SELENONQ9NZV5 590 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 MSRB1Q9NZV6 116 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 WRAP73Q9P2S5 460 aaPredicted RBP3.23□□□□□ -1.89
CSDE1-208ENST00000524652 ADD3Q9UEY8 706 aaKnown RBP3.23□□□□□ -1.89
CSDE1-208ENST00000524652 AGO2Q9UKV8 859 aaKnown RBP3.23□□□□□ -1.89
CSDE1-208ENST00000524652 PNMA2Q9UL42 364 aa3.23□□□□□ -1.89
CSDE1-208ENST00000524652 TDRD15B5MCY1 1934 aaKnown RBP3.23□□□□□ -1.89
CSDE1-208ENST00000524652 NOTCH4Q99466 2003 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 GRIN2DO15399 1336 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 NLRC5Q86WI3 1866 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 ASH1LQ9NR48 2969 aaKnown RBP3.22□□□□□ -1.89
CSDE1-208ENST00000524652 CFAP54Q96N23 3096 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 A0A087WWV3 80 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 TRBV5-3A0A0A0MS03 114 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 IGKV6D-21A0A0A0MT36 114 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 TMEM150BA6NC51 233 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 GTPBP1O00178 669 aaKnown RBP3.22□□□□□ -1.89
CSDE1-208ENST00000524652 IPO5O00410 1097 aaKnown RBP3.22□□□□□ -1.89
CSDE1-208ENST00000524652 SPTLC2O15270 562 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 FIBPO43427 364 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 NEMFO60524 1076 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 CBFA2T3O75081 653 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 DUSP11O75319 330 aaKnown RBP3.22□□□□□ -1.89
CSDE1-208ENST00000524652 MED24O75448 989 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 STBD1O95210 358 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 HSP90AA1P07900 732 aaKnown RBP3.22□□□□□ -1.89
CSDE1-208ENST00000524652 MMP3P08254 477 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 OR52Z1P0C646 297 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 AKR1A1P14550 325 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 ST6GAL1P15907 406 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 MARCKSP29966 332 aaPredicted RBP3.22□□□□□ -1.89
CSDE1-208ENST00000524652 CDC25AP30304 524 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 HOXD12P35452 270 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 IDUAP35475 653 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 TECP42680 631 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 PGGT1BP53609 377 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 SETQ01105 290 aaPredicted RBP3.22□□□□□ -1.89
CSDE1-208ENST00000524652 SP4Q02446 784 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 TNFAIP2Q03169 654 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 MTA1Q13330 715 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 FHL3Q13643 280 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 PRTGQ2VWP7 1150 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 DUSP28Q4G0W2 176 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 SPECC1Q5M775 1068 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 CELF3Q5SZQ8 465 aaKnown RBP3.22□□□□□ -1.89
CSDE1-208ENST00000524652 MFSD14CQ5VZR4 134 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 MOXD1Q6UVY6 613 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 RNF44Q7L0R7 432 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 NIPA1Q7RTP0 329 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 TLK2Q86UE8 772 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 CCDC60Q8IWA6 550 aaPredicted RBP3.22□□□□□ -1.89
CSDE1-208ENST00000524652 RAVER1Q8IY67 606 aaKnown RBP3.22□□□□□ -1.89
CSDE1-208ENST00000524652 KRT78Q8N1N4 520 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 LINC00301Q8NCQ3 95 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 KLHDC9Q8NEP7 349 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 OR6J1Q8NGC5 347 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 B4GALNT2Q8NHY0 566 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 SCFD2Q8WU76 684 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 AFG1LQ8WV93 481 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 AKAP1Q92667 903 aaKnown RBP eCLIP3.22□□□□□ -1.89
CSDE1-208ENST00000524652 KAT2BQ92831 832 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 ZBTB10Q96DT7 871 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 DEFB118Q96PH6 123 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 ZNF577Q9BSK1 485 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 TMEM204Q9BSN7 226 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 C16orf70Q9BSU1 422 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 MMTAG2Q9BU76 263 aaKnown RBP3.22□□□□□ -1.89
CSDE1-208ENST00000524652 UNKQ9C0B0 810 aaKnown RBP3.22□□□□□ -1.89
CSDE1-208ENST00000524652 GLT8D2Q9H1C3 349 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 UPF3AQ9H1J1 476 aaKnown RBP3.22□□□□□ -1.89
CSDE1-208ENST00000524652 MOV10Q9HCE1 1003 aaKnown RBP3.22□□□□□ -1.89
CSDE1-208ENST00000524652 ZBTB26Q9HCK0 441 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 ASNSD1Q9NWL6 643 aa3.22□□□□□ -1.89
CSDE1-208ENST00000524652 DDX20Q9UHI6 824 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms