RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 FGFR3P22607 806 aa10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 PEX2P28328 305 aa10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 PKNOX1P55347 436 aa10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 C1QTNF8P60827 252 aa10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 SEMA3AQ14563 771 aa10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 PARP15Q460N3 678 aa10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 ZNF549Q6P9A3 640 aa10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 TAS1R1Q7RTX1 841 aa10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 KBTBD6Q86V97 674 aa10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 TMEM173Q86WV6 379 aaPredicted RBP10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 OR52K2Q8NGK3 314 aa10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 OR13C4Q8NGS5 318 aa10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 STON2Q8WXE9 905 aa10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 GATA6Q92908 595 aa10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 USP13Q92995 863 aaPredicted RBP10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 CASD1Q96PB1 797 aa10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 SUFUQ9UMX1 484 aa10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 TET1Q8NFU7 2136 aa10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 STX16-NPEPL1H3BU86 382 aa10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 MAP3K13O43283 966 aa10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 PRAMEF11O60813 436 aa10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 PRSS56P0CW18 603 aa10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 ENO3P13929 434 aaPredicted RBP10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 XRCC1P18887 633 aaPredicted RBP10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 TSPAN8P19075 237 aa10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 GPNMBQ14956 572 aa10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 SFT2D3Q587I9 215 aa10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 C16orf89Q6UX73 402 aa10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 FAM43BQ6ZT52 329 aaPredicted RBP10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 CUZD1Q86UP6 607 aa10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 ABI1Q8IZP0 508 aa10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 RNF148Q8N7C7 305 aa10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 TSPAN17Q96FV3 270 aa10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 NPAS2Q99743 824 aa10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 DONSONQ9NYP3 566 aa10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 STK39Q9UEW8 545 aa10.8□□□□□ -0.68
RAB11FIP1-204ENST00000522774 A0A1W2PQ45 241 aaPredicted RBP10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 A0A1W2PQY0 241 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 TCAF2A6NFQ2 919 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 SLC22A2O15244 555 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 NBNO60934 754 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 GOT2P00505 430 aaKnown RBP10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 UBTFL6P0CB48 400 aaPredicted RBP10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 SLC6A4P31645 630 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 TIAL1Q01085 375 aaKnown RBP eCLIP10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 GPR17Q13304 367 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 CEACAM7Q14002 265 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 ZNF235Q14590 738 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 ACAP2Q15057 778 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 PPP1R3AQ16821 1122 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 KLC3Q6P597 504 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 BNC2Q6ZN30 1099 aaPredicted RBP10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 GK5Q6ZS86 529 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 GALNT7Q86SF2 657 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 LGI2Q8N0V4 545 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 PELI3Q8N2H9 469 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 DBF4BQ8NFT6 615 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 OR7D4Q8NG98 312 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 HMGCLL1Q8TB92 370 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 SPPL2BQ8TCT7 592 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 GDPD5Q8WTR4 605 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 PTERQ96BW5 349 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 IFT43Q96FT9 208 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 NSMCE3Q96MG7 304 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 POLR1EQ9GZS1 481 aaKnown RBP10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 EBF3Q9H4W6 596 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 GSTO2Q9H4Y5 243 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 PDFQ9HBH1 243 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 PRPF19Q9UMS4 504 aaKnown RBP10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 TRPC5OSA6NMA1 111 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 UBFD1O14562 309 aaKnown RBP10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 ENPP3O14638 875 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 RBP1P09455 135 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 ATF6P18850 670 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 SP3Q02447 781 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 HERC3Q15034 1050 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 ZNF423Q2M1K9 1284 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 TCTN1Q2MV58 587 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 PIGGQ5H8A4 983 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 ARMC3Q5W041 872 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 FUT10Q6P4F1 479 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 LRRC8DQ7L1W4 858 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 SETD3Q86TU7 594 aaPredicted RBP10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 ISCA2Q86U28 154 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 SNX31Q8N9S9 440 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 CEP70Q8NHQ1 597 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 WDR41Q9HAD4 459 aa10.79□□□□□ -0.68
RAB11FIP1-204ENST00000522774 CCDC162PA2VCL2 907 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 MOXD2PA6NHM9 499 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 TBC1D4O60343 1298 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 ZDHHC11BP0C7U3 371 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 HOXD9P28356 352 aaPredicted RBP10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 ADSLP30566 484 aaPredicted RBP10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 MAPKAPK2P49137 400 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 YBEYP58557 167 aaPredicted RBP10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 ACVR1Q04771 509 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 RING1Q06587 406 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 PRSS55Q6UWB4 352 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms