RNA–Protein interactions for RNA: ENST00000522275.5

PCM1-215, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-215ENST00000522275 RNF34Q969K3 372 aa4.68□□□□□ -1.66
PCM1-215ENST00000522275 CSF3RQ99062 836 aa4.68□□□□□ -1.66
PCM1-215ENST00000522275 NPAS1Q99742 590 aa4.68□□□□□ -1.66
PCM1-215ENST00000522275 APBA2Q99767 749 aa4.68□□□□□ -1.66
PCM1-215ENST00000522275 VRK1Q99986 396 aaPredicted RBP4.68□□□□□ -1.66
PCM1-215ENST00000522275 EIF2AK1Q9BQI3 630 aaKnown RBP4.68□□□□□ -1.66
PCM1-215ENST00000522275 TUBGCP2Q9BSJ2 902 aa4.68□□□□□ -1.66
PCM1-215ENST00000522275 ROGDIQ9GZN7 287 aa4.68□□□□□ -1.66
PCM1-215ENST00000522275 COPS7BQ9H9Q2 264 aaPredicted RBP4.68□□□□□ -1.66
PCM1-215ENST00000522275 ABCB10Q9NRK6 738 aa4.68□□□□□ -1.66
PCM1-215ENST00000522275 CMTM6Q9NX76 183 aa4.68□□□□□ -1.66
PCM1-215ENST00000522275 HSPBP1Q9NZL4 362 aa4.68□□□□□ -1.66
PCM1-215ENST00000522275 VSX1Q9NZR4 365 aaPredicted RBP4.68□□□□□ -1.66
PCM1-215ENST00000522275 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.68□□□□□ -1.66
PCM1-215ENST00000522275 KLHL9Q9P2J3 617 aa4.68□□□□□ -1.66
PCM1-215ENST00000522275 ARPP21Q9UBL0 812 aaPredicted RBP4.68□□□□□ -1.66
PCM1-215ENST00000522275 ASH2LQ9UBL3 628 aa4.68□□□□□ -1.66
PCM1-215ENST00000522275 CTSFQ9UBX1 484 aa4.68□□□□□ -1.66
PCM1-215ENST00000522275 LGALS13Q9UHV8 139 aa4.68□□□□□ -1.66
PCM1-215ENST00000522275 SERPINB13Q9UIV8 391 aa4.68□□□□□ -1.66
PCM1-215ENST00000522275 CDH22Q9UJ99 828 aa4.68□□□□□ -1.66
PCM1-215ENST00000522275 METRNQ9UJH8 293 aa4.68□□□□□ -1.66
PCM1-215ENST00000522275 VAV3Q9UKW4 847 aa4.68□□□□□ -1.66
PCM1-215ENST00000522275 DGKBQ9Y6T7 804 aa4.68□□□□□ -1.66
PCM1-215ENST00000522275 ABCA6Q8N139 1617 aa4.68□□□□□ -1.66
PCM1-215ENST00000522275 KRT87PA6NCN2 255 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 TRIM49BA6NDI0 452 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 SAGE2PA6NJ88 616 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 RBAK-RBAKDNI3L0D1 243 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 GPR37O15354 613 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 PRPF4O43172 522 aaKnown RBP eCLIP4.67□□□□□ -1.66
PCM1-215ENST00000522275 HUS1O60921 280 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 TAF5LO75529 589 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 RPS6KA4O75676 772 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 CCNB2O95067 398 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 APOL3O95236 402 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 POMCP01189 267 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 APOA1P02647 267 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 POLBP06746 335 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 KLK3P07288 261 aaPredicted RBP4.67□□□□□ -1.66
PCM1-215ENST00000522275 RBP1P09455 135 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 MYL2P10916 166 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 BMP4P12644 408 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 IL7P13232 177 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 ZNF26P17031 533 aaPredicted RBP4.67□□□□□ -1.66
PCM1-215ENST00000522275 PFKLP17858 780 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 TNNI3P19429 210 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 MAGP20916 626 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 PTPREP23469 700 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 CHMP24386 653 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 POU1F1P28069 291 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 PIK3CBP42338 1070 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 IL12RB1P42701 662 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 ARCN1P48444 511 aaKnown RBP4.67□□□□□ -1.66
PCM1-215ENST00000522275 RPL10AP62906 217 aaKnown RBP4.67□□□□□ -1.66
PCM1-215ENST00000522275 BNC1Q01954 994 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 CDH17Q12864 832 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 ILF2Q12905 390 aaKnown RBP4.67□□□□□ -1.66
PCM1-215ENST00000522275 PPIL2Q13356 520 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 BFSP2Q13515 415 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 ACOX1Q15067 660 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 LRRC41Q15345 812 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 SSX2Q16385 188 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 CALCRLQ16602 461 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 TMEM44Q2T9K0 475 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 TOR1AIP1Q5JTV8 583 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 C9orf131Q5VYM1 1079 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 C3orf33Q6P1S2 294 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 BHLHB9Q6PI77 547 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 CREB3L2Q70SY1 520 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 VN1R5Q7Z5H4 357 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 SLC9B2Q86UD5 537 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 DCP1BQ8IZD4 617 aaKnown RBP4.67□□□□□ -1.66
PCM1-215ENST00000522275 LGI2Q8N0V4 545 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 PARP8Q8N3A8 854 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 CELF2-AS1Q8N7Q2 184 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 KBTBD3Q8NAB2 608 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 AGBL3Q8NEM8 1001 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 PLBD2Q8NHP8 589 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 DNAJB8Q8NHS0 232 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 SETD7Q8WTS6 366 aaKnown RBP4.67□□□□□ -1.66
PCM1-215ENST00000522275 RAB2BQ8WUD1 216 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 PPP1R13LQ8WUF5 828 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 HEXDCQ8WVB3 486 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 TCEAL3Q969E4 200 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 E2F7Q96AV8 911 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 BIRC7Q96CA5 298 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 PGAP3Q96FM1 320 aaPredicted RBP4.67□□□□□ -1.66
PCM1-215ENST00000522275 GLT1D1Q96MS3 346 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 QRFPRQ96P65 431 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 SLC9A7Q96T83 725 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 NYXQ9GZU5 481 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 ILKAPQ9H0C8 392 aaPredicted RBP4.67□□□□□ -1.66
PCM1-215ENST00000522275 ZCCHC4Q9H5U6 513 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 VRTNQ9H8Y1 702 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 GORASP2Q9H8Y8 452 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 CHMP1AQ9HD42 196 aaPredicted RBP4.67□□□□□ -1.66
PCM1-215ENST00000522275 SNX15Q9NRS6 342 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 RIMS3Q9UJD0 308 aa4.67□□□□□ -1.66
PCM1-215ENST00000522275 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms