RNA–Protein interactions for RNA: ENST00000522275.5

PCM1-215, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-215ENST00000522275 AEBP2Q6ZN18 517 aaPredicted RBP9.7□□□□□ -0.86
PCM1-215ENST00000522275 CHIC1Q5VXU3 224 aa9.09□□□□□ -0.95
PCM1-215ENST00000522275 PELP1Q8IZL8 1130 aaKnown RBP8.54□□□□□ -1.04
PCM1-215ENST00000522275 MYT1Q01538 1121 aa8.42□□□□□ -1.06
PCM1-215ENST00000522275 SENP3Q9H4L4 574 aaPredicted RBP8.33□□□□□ -1.08
PCM1-215ENST00000522275 POTEDQ86YR6 584 aa8.3□□□□□ -1.08
PCM1-215ENST00000522275 PHF23Q9BUL5 403 aaPredicted RBP8.18□□□□□ -1.1
PCM1-215ENST00000522275 TTBK1Q5TCY1 1321 aaPredicted RBP8.11□□□□□ -1.11
PCM1-215ENST00000522275 PRKCSHP14314 528 aaPredicted RBP8.03□□□□□ -1.12
PCM1-215ENST00000522275 SLC24A1O60721 1099 aa7.84□□□□□ -1.15
PCM1-215ENST00000522275 ERICH6Q7L0X2 663 aa7.82□□□□□ -1.16
PCM1-215ENST00000522275 APLP2Q06481 763 aa7.82□□□□□ -1.16
PCM1-215ENST00000522275 HRCP23327 699 aa7.81□□□□□ -1.16
PCM1-215ENST00000522275 FOXD1Q16676 465 aa7.78□□□□□ -1.16
PCM1-215ENST00000522275 BCL11AQ9H165 835 aa7.77□□□□□ -1.17
PCM1-215ENST00000522275 SCAF1Q9H7N4 1312 aaKnown RBP7.76□□□□□ -1.17
PCM1-215ENST00000522275 FAM9AQ8IZU1 332 aaPredicted RBP7.69□□□□□ -1.18
PCM1-215ENST00000522275 PPARGC1BQ86YN6 1023 aaKnown RBP7.62□□□□□ -1.19
PCM1-215ENST00000522275 DAXXQ9UER7 740 aaPredicted RBP7.49□□□□□ -1.21
PCM1-215ENST00000522275 CENPBP07199 599 aaPredicted RBP7.48□□□□□ -1.21
PCM1-215ENST00000522275 PLPPR3Q6T4P5 718 aa7.46□□□□□ -1.21
PCM1-215ENST00000522275 MSH5O43196 834 aa7.41□□□□□ -1.22
PCM1-215ENST00000522275 EIF5BO60841 1220 aaKnown RBP7.38□□□□□ -1.23
PCM1-215ENST00000522275 ACIN1Q9UKV3 1341 aaKnown RBP7.36□□□□□ -1.23
PCM1-215ENST00000522275 GTF3C3Q9Y5Q9 886 aa7.35□□□□□ -1.23
PCM1-215ENST00000522275 PCGF6Q9BYE7 350 aa7.33□□□□□ -1.24
PCM1-215ENST00000522275 ANP32EQ9BTT0 268 aa7.32□□□□□ -1.24
PCM1-215ENST00000522275 NEUROD1Q13562 356 aa7.31□□□□□ -1.24
PCM1-215ENST00000522275 CSRNP3Q8WYN3 585 aa7.27□□□□□ -1.24
PCM1-215ENST00000522275 PLEKHG5O94827 1062 aa7.26□□□□□ -1.25
PCM1-215ENST00000522275 ANO8Q9HCE9 1232 aaPredicted RBP7.24□□□□□ -1.25
PCM1-215ENST00000522275 UBE2Q2Q8WVN8 375 aa7.22□□□□□ -1.25
PCM1-215ENST00000522275 PIAS4Q8N2W9 510 aaPredicted RBP7.17□□□□□ -1.26
PCM1-215ENST00000522275 ZEB1P37275 1124 aaPredicted RBP7.15□□□□□ -1.27
PCM1-215ENST00000522275 PODXL2Q9NZ53 605 aa7.12□□□□□ -1.27
PCM1-215ENST00000522275 ADRA2BP18089 450 aa7.09□□□□□ -1.27
PCM1-215ENST00000522275 PPP6R1Q9UPN7 881 aa7.08□□□□□ -1.28
PCM1-215ENST00000522275 PKNOX2Q96KN3 472 aa7.06□□□□□ -1.28
PCM1-215ENST00000522275 SALL2Q9Y467 1007 aaPredicted RBP7.05□□□□□ -1.28
PCM1-215ENST00000522275 CCDC136Q96JN2 1154 aa7.03□□□□□ -1.28
PCM1-215ENST00000522275 MYO15BQ96JP2 1530 aa6.99□□□□□ -1.29
PCM1-215ENST00000522275 TSHZ2Q9NRE2 1034 aa6.97□□□□□ -1.29
PCM1-215ENST00000522275 TRIM26Q12899 539 aaPredicted RBP6.91□□□□□ -1.3
PCM1-215ENST00000522275 ERICH6BQ5W0A0 696 aa6.91□□□□□ -1.3
PCM1-215ENST00000522275 KLHL34Q8N239 644 aa6.89□□□□□ -1.31
PCM1-215ENST00000522275 NCBP3Q53F19 620 aaKnown RBP6.88□□□□□ -1.31
PCM1-215ENST00000522275 DIEXFQ68CQ4 756 aaKnown RBP6.88□□□□□ -1.31
PCM1-215ENST00000522275 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.88□□□□□ -1.31
PCM1-215ENST00000522275 CCDC180Q9P1Z9 1646 aa6.87□□□□□ -1.31
PCM1-215ENST00000522275 NEFLP07196 543 aa6.86□□□□□ -1.31
PCM1-215ENST00000522275 PDIA4P13667 645 aaKnown RBP6.84□□□□□ -1.31
PCM1-215ENST00000522275 PDE4CQ08493 712 aa6.84□□□□□ -1.31
PCM1-215ENST00000522275 YTHDC1Q96MU7 727 aaKnown RBP6.84□□□□□ -1.31
PCM1-215ENST00000522275 DEKP35659 375 aaKnown RBP6.83□□□□□ -1.32
PCM1-215ENST00000522275 DCAF1Q9Y4B6 1507 aa6.83□□□□□ -1.32
PCM1-215ENST00000522275 MYT1LQ9UL68 1186 aa6.82□□□□□ -1.32
PCM1-215ENST00000522275 SUPT16HQ9Y5B9 1047 aaKnown RBP6.82□□□□□ -1.32
PCM1-215ENST00000522275 RANGAP1P46060 587 aaPredicted RBP6.81□□□□□ -1.32
PCM1-215ENST00000522275 FGD1P98174 961 aa6.79□□□□□ -1.32
PCM1-215ENST00000522275 KCNA4P22459 653 aa6.79□□□□□ -1.32
PCM1-215ENST00000522275 ARXQ96QS3 562 aa6.79□□□□□ -1.32
PCM1-215ENST00000522275 A0A0U1RQG5 324 aaPredicted RBP6.76□□□□□ -1.33
PCM1-215ENST00000522275 RBM19Q9Y4C8 960 aaKnown RBP6.76□□□□□ -1.33
PCM1-215ENST00000522275 CLSPNQ9HAW4 1339 aa6.76□□□□□ -1.33
PCM1-215ENST00000522275 BCL11BQ9C0K0 894 aaPredicted RBP6.75□□□□□ -1.33
PCM1-215ENST00000522275 ZMYND15Q9H091 742 aa6.75□□□□□ -1.33
PCM1-215ENST00000522275 TIMELESSQ9UNS1 1208 aa6.74□□□□□ -1.33
PCM1-215ENST00000522275 RTN4Q9NQC3 1192 aaKnown RBP6.73□□□□□ -1.33
PCM1-215ENST00000522275 IL27Q8NEV9 243 aa6.73□□□□□ -1.33
PCM1-215ENST00000522275 AAMPQ13685 434 aa6.71□□□□□ -1.34
PCM1-215ENST00000522275 GLIPR1L2Q4G1C9 344 aa6.7□□□□□ -1.34
PCM1-215ENST00000522275 RBM10P98175 930 aaKnown RBP6.69□□□□□ -1.34
PCM1-215ENST00000522275 VSIG10Q8N0Z9 540 aa6.68□□□□□ -1.34
PCM1-215ENST00000522275 TAF7LQ5H9L4 462 aa6.67□□□□□ -1.34
PCM1-215ENST00000522275 TRIM41Q8WV44 630 aa6.67□□□□□ -1.34
PCM1-215ENST00000522275 CACNB1Q02641 598 aaPredicted RBP6.65□□□□□ -1.34
PCM1-215ENST00000522275 PPP4R3CPQ6ZMV5 832 aa6.64□□□□□ -1.35
PCM1-215ENST00000522275 MIER1Q8N108 512 aa6.64□□□□□ -1.35
PCM1-215ENST00000522275 FANCIQ9NVI1 1328 aa6.62□□□□□ -1.35
PCM1-215ENST00000522275 EHMT2Q96KQ7 1210 aa6.61□□□□□ -1.35
PCM1-215ENST00000522275 RSPH6AQ9H0K4 717 aa6.6□□□□□ -1.35
PCM1-215ENST00000522275 DHX37Q8IY37 1157 aaKnown RBP6.58□□□□□ -1.36
PCM1-215ENST00000522275 ZNF316A6NFI3 1004 aaPredicted RBP6.58□□□□□ -1.36
PCM1-215ENST00000522275 PAXIP1Q6ZW49 1069 aaPredicted RBP6.58□□□□□ -1.36
PCM1-215ENST00000522275 BCANQ96GW7 911 aa6.58□□□□□ -1.36
PCM1-215ENST00000522275 DMRT2Q9Y5R5 561 aa6.58□□□□□ -1.36
PCM1-215ENST00000522275 LOC105371045A0A1W2PR82 267 aa6.57□□□□□ -1.36
PCM1-215ENST00000522275 TULP1O00294 542 aaPredicted RBP6.57□□□□□ -1.36
PCM1-215ENST00000522275 NBR1Q14596 966 aa6.57□□□□□ -1.36
PCM1-215ENST00000522275 CHMP4AQ9BY43 222 aa6.55□□□□□ -1.36
PCM1-215ENST00000522275 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.55□□□□□ -1.36
PCM1-215ENST00000522275 CCER1Q8TC90 406 aaPredicted RBP6.55□□□□□ -1.36
PCM1-215ENST00000522275 HOMEZQ8IX15 550 aa6.54□□□□□ -1.36
PCM1-215ENST00000522275 BRD2P25440 801 aaKnown RBP6.52□□□□□ -1.37
PCM1-215ENST00000522275 MAPK8IP2Q13387 824 aaPredicted RBP6.52□□□□□ -1.37
PCM1-215ENST00000522275 SUPT5HO00267 1087 aaKnown RBP6.51□□□□□ -1.37
PCM1-215ENST00000522275 RSPH4AQ5TD94 716 aa6.51□□□□□ -1.37
PCM1-215ENST00000522275 FKBP8Q14318 412 aa6.5□□□□□ -1.37
PCM1-215ENST00000522275 NAP1L5Q96NT1 182 aaPredicted RBP6.5□□□□□ -1.37
PCM1-215ENST00000522275 C11orf95C9JLR9 678 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms