RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 ADAM22Q9P0K1 906 aa8.33□□□□□ -1.08
SCARNA20.3-201ENST00000516913 GPR34Q9UPC5 381 aa8.33□□□□□ -1.08
SCARNA20.3-201ENST00000516913 LRBAP50851 2863 aa8.33□□□□□ -1.08
SCARNA20.3-201ENST00000516913 SCN8AQ9UQD0 1980 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 CCDC187A0A096LP49 1063 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 PRAMEF33A0A0G2JMD5 474 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 CREB3O43889 395 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 PRAMEF10O60809 474 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 TCEA3O75764 348 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 RECQL5O94762 991 aaPredicted RBP8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 SOD1P00441 154 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 PCCBP05166 539 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 FGF1P05230 155 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 ANXA6P08133 673 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 ITGA2BP08514 1039 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 FAM87AP0C7U9 286 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 ATP1A3P13637 1013 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 GPD1P21695 349 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 LHCGRP22888 699 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 IL1R2P27930 398 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 EPHB2P29323 1055 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 RBMS1P29558 406 aaKnown RBP8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 ETFBP38117 255 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 ZNF143P52747 638 aaPredicted RBP8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 THOP1P52888 689 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 COPB1P53618 953 aaKnown RBP8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 MAZP56270 477 aaKnown RBP8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 OR1D5P58170 312 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 RHOAP61586 193 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 SLC10A7Q0GE19 358 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 MAMLD1Q13495 774 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 SCYL2Q6P3W7 929 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 RBM43Q6ZSC3 357 aaKnown RBP8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 RAB11FIP2Q7L804 512 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 SPRED1Q7Z699 444 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 SLFN11Q7Z7L1 901 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 SRLQ86TD4 932 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 MCOLN2Q8IZK6 566 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 ARL10Q8N8L6 244 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 C3orf20Q8ND61 904 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 FAM174AQ8TBP5 190 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 ENOX1Q8TC92 643 aaKnown RBP8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 JPH3Q8WXH2 748 aaPredicted RBP8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 TBATAQ96M53 351 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 COQ10AQ96MF6 247 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 GDAP1L1Q96MZ0 367 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 MCEEQ96PE7 176 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 NUDT22Q9BRQ3 303 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 RDH14Q9HBH5 336 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 EPB41L5Q9HCM4 733 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 TMEM9Q9P0T7 183 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 ACSL6Q9UKU0 697 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 DGKBQ9Y6T7 804 aa8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 RP1L1Q8IWN7 2480 aaPredicted RBP8.32□□□□□ -1.08
SCARNA20.3-201ENST00000516913 LRRC10BA6NIK2 292 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 H3BM21 787 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 TERTO14746 1132 aaKnown RBP8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 CEACAM5P06731 702 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 CR2P20023 1033 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 MPSTP25325 297 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 AK4P27144 223 aaPredicted RBP8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 CD1CP29017 333 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 CCKBRP32239 447 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 CSF2RBP32927 897 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 PEX5P50542 639 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 SRSF1Q07955 248 aaKnown RBP eCLIP8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 CCDC15Q0P6D6 951 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 SPIDRQ14159 915 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 TBR1Q16650 682 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 ZSCAN23Q3MJ62 389 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 NKAIN2Q5VXU1 208 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 USP53Q70EK8 1073 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 HSD11B1LQ7Z5J1 315 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 TSPAN33Q86UF1 283 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 ZNF677Q86XU0 584 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 FBXO39Q8N4B4 442 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 RCBTB1Q8NDN9 531 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 CXorf40AQ8TE69 158 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 LRRN4Q8WUT4 740 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 USP7Q93009 1102 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 RNF31Q96EP0 1072 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 CCNL2Q96S94 520 aaPredicted RBP8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 AGAP2Q99490 1192 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 AGPAT1Q99943 283 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 FUCA2Q9BTY2 467 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 OSBPL1AQ9BXW6 950 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 SLC13A1Q9BZW2 595 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 SPRY4Q9C004 299 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 SYNDIG1Q9H7V2 258 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 STARD5Q9NSY2 213 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 CWC15Q9P013 229 aaKnown RBP8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 B4GALT6Q9UBX8 382 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 PISDQ9UG56 409 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 APPL1Q9UKG1 709 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 ATP8A1Q9Y2Q0 1164 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 LOXL2Q9Y4K0 774 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 PCDHGA7Q9Y5G6 932 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 CELSR2Q9HCU4 2923 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 SDK2Q58EX2 2172 aa8.31□□□□□ -1.08
SCARNA20.3-201ENST00000516913 SPTBN1Q01082 2364 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms