RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 BMP15O95972 392 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 IGKV2-30P06310 120 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 OR4Q2P0C623 313 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 HAPLN1P10915 354 aaPredicted RBP3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 IFNAR1P17181 557 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 ATF6P18850 670 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 CYP11B2P19099 503 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 HDCP19113 662 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 MUTP22033 750 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 CD40P25942 277 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 U2AF2P26368 475 aaKnown RBP eCLIP3.88□□□□□ -1.792e-9■■■■■ 29.5
PDLIM5-218ENST00000513341 CD6P30203 668 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 LSP1P33241 339 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 HSPA4P34932 840 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 PPP3CCP48454 512 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 FOXG1P55316 489 aaPredicted RBP3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 RIPPLY3P57055 190 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 ANAPC15P60006 121 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 ERVPABLB-1P60509 514 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 RPL10AP62906 217 aaKnown RBP3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 APBA1Q02410 837 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 STRN3Q13033 797 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 TARDBPQ13148 414 aaKnown RBP eCLIP3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 LY6DQ14210 128 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 CTTNQ14247 550 aaKnown RBP3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 E2F5Q15329 346 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 NFE2Q16621 373 aaPredicted RBP3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 KYAT1Q16773 422 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 TBC1D25Q3MII6 688 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 MGAT5BQ3V5L5 792 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 CREB3L3Q68CJ9 461 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 DHRS13Q6UX07 377 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 DSTYKQ6XUX3 929 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 NEK8Q86SG6 692 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 RHOT2Q8IXI1 618 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 DCP1BQ8IZD4 617 aaKnown RBP3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 BLIDQ8IZY5 108 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 NXPE1Q8N323 547 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 TMEM132CQ8N3T6 1108 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 DEFB119Q8N690 84 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 ATL2Q8NHH9 583 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 DEPTORQ8TB45 409 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 LRRC15Q8TF66 581 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 CHTF18Q8WVB6 975 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 RFFLQ8WZ73 363 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 OTUB2Q96DC9 234 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 IFT74Q96LB3 600 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 CYP2S1Q96SQ9 504 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 LGMNQ99538 433 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 ACO2Q99798 780 aaKnown RBP3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 EIF2AK1Q9BQI3 630 aaKnown RBP3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 HEPHQ9BQS7 1158 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 NTPCRQ9BSD7 190 aaKnown RBP3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 TCHPQ9BT92 498 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 LRRC2Q9BYS8 371 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 SEMA4CQ9C0C4 833 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 ZCWPW1Q9H0M4 648 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 PCDH12Q9NPG4 1184 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 WSB2Q9NYS7 404 aaPredicted RBP3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 EHD2Q9NZN4 543 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 GCNT4Q9P109 453 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 CALCOCO1Q9P1Z2 691 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 TBC1D14Q9P2M4 693 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 UBQLN1Q9UMX0 589 aaKnown RBP3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 ARHGAP26Q9UNA1 814 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 HEMK1Q9Y5R4 338 aaPredicted RBP3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 USP9YO00507 2555 aaPredicted RBP3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 OBSL1O75147 1896 aa3.88□□□□□ -1.79
PDLIM5-218ENST00000513341 MYLKQ15746 1914 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 COL12A1Q99715 3063 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 A0A1W2PQF6 199 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 A0A1W2PR48 441 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 E2F8A0AVK6 867 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 TBC1D3BA6NDS4 549 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 NPC1O15118 1278 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 SLC37A4O43826 429 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 CCNT1O60563 726 aaKnown RBP3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 NOL4O94818 638 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 ADRB2P07550 413 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 ODC1P11926 461 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 HOXB2P14652 356 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 GPR15P49685 360 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 SESN3P58005 492 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 LILRA4P59901 499 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 ASIC1P78348 528 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 E2F1Q01094 437 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 GAD2Q05329 585 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 CCDC173Q0VFZ6 552 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 MYO1EQ12965 1108 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 KRT32Q14532 448 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 ATP13A4Q4VNC1 1196 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 SLC39A12Q504Y0 691 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 NCAPH2Q6IBW4 605 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 RHBDF2Q6PJF5 856 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 ERICH1Q86X53 443 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 METTL23Q86XA0 190 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 SPATS2Q86XZ4 545 aaKnown RBP3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 MARCH9Q86YJ5 346 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 CD302Q8IX05 232 aa3.87□□□□□ -1.79
PDLIM5-218ENST00000513341 DHX40Q8IX18 779 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms