RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 HLA-DPA1P20036 260 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 CD6P30203 668 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 CNR2P34972 360 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 RPL22P35268 128 aaKnown RBP7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 ABL2P42684 1182 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 FNTBP49356 437 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 EPHB1P54762 984 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 ADPRHP54922 357 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 WNT3AP56704 352 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 BASP1P80723 227 aaKnown RBP7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 DR1Q01658 176 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 CDK18Q07002 472 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 DMWDQ09019 674 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 GPS1Q13098 491 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 SEMA5AQ13591 1074 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 PTK6Q13882 451 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 IHHQ14623 411 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 TRIP13Q15645 432 aaPredicted RBP7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 PCSK7Q16549 785 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 UGP2Q16851 508 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 MAP7D1Q3KQU3 841 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 FAM182AQ5T1J6 154 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 FAXCQ5TGI0 409 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 KCTD11Q693B1 232 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 NAPEPLDQ6IQ20 393 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 ERAP2Q6P179 960 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 ZC3H14Q6PJT7 736 aaKnown RBP7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 KDELC1Q6UW63 502 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 SLC36A4Q6YBV0 504 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 USP45Q70EL2 814 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 PRUNE1Q86TP1 453 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 CTAGE6Q86UF2 777 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 C11orf74Q86VG3 221 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 ZSWIM9Q86XI8 627 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 JAMLQ86YT9 394 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 CTAGE4Q8IX94 777 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 CEP112Q8N8E3 955 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 ZBTB44Q8NCP5 570 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 IPMKQ8NFU5 416 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 GAB3Q8WWW8 586 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 RMDN1Q96DB5 314 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 MRGPRX2Q96LB1 330 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 TRIB3Q96RU7 358 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 KRT12Q99456 494 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 GORASP1Q9BQQ3 440 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 MLPHQ9BV36 600 aaPredicted RBP7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 KCNH6Q9H252 994 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 NEUROG2Q9H2A3 272 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 LRRC40Q9H9A6 602 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 PREBQ9HCU5 417 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 CD93Q9NPY3 652 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 EIF2B3Q9NR50 452 aaKnown RBP7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 RAB6BQ9NRW1 208 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 WSB2Q9NYS7 404 aaPredicted RBP7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 UBP1Q9NZI7 540 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 TPX2Q9ULW0 747 aaKnown RBP7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 PHTF1Q9UMS5 762 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 CHKBQ9Y259 395 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 PPIL1Q9Y3C6 166 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 NEU2Q9Y3R4 380 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 PCDHGA2Q9Y5H1 932 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 WDFY4Q6ZS81 3184 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 ARHGEF17Q96PE2 2063 aaPredicted RBP7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 MUC6Q6W4X9 2439 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 LOC285095A0A1B0GVY8 99 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 FAM187AA6NFU0 413 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 CAPN8A6NHC0 703 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 LRRC72A6NJI9 287 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 ANKRD66B4E2M5 251 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 PLK4O00444 970 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 AREL1O15033 823 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 TTI1O43156 1089 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 TSPAN6O43657 245 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 NDUFS2O75306 463 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 RPP40O75818 363 aaKnown RBP7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 SEMA4FO95754 770 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 F12P00748 615 aaPredicted RBP7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 PRLP01236 227 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 APRTP07741 180 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 PDHA1P08559 390 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 ZSCAN5DPP0CG00 497 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 CYP2A6P11509 494 aaPredicted RBP7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 TIMP2P16035 220 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 ZNF30P17039 623 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 TPSB2P20231 275 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 ACSL1P33121 698 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 MMP12P39900 470 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 SLC19A1P41440 591 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 PTGIRP43119 386 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 LMAN1P49257 510 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 VPS41P49754 854 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 TAS2R38P59533 333 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 CDK16Q00536 496 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 GALNT3Q14435 633 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 TPSAB1Q15661 275 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 SLC1A5Q15758 541 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 TMEM259Q4ZIN3 620 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 LRRC73Q5JTD7 316 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 CCDC70Q6NSX1 233 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms