RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 SPATA4Q8NEY3 305 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 OR7G3Q8NG95 312 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 EXOC6Q8TAG9 804 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 PIP4K2CQ8TBX8 421 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 RBM41Q96IZ5 413 aaKnown RBP6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 ZNF558Q96NG5 402 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 ADI1Q9BV57 179 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 TPPP3Q9BW30 176 aa6.35□□□□□ -1.39
TRAPPC11-209ENST00000512476 NPC1L1Q9UHC9 1359 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 PTPRUQ92729 1446 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 SHISA3A0PJX4 238 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 ZNF879B4DU55 563 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 NRG2O14511 850 aaPredicted RBP6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 EIF3DO15371 548 aaKnown RBP eCLIP6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 CIB2O75838 187 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 ITGBL1O95965 494 aaPredicted RBP6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 CLPTM1O96005 669 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 OTCP00480 354 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 FGBP02675 491 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 CTNNA2P26232 953 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 GATMP50440 423 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 CDH15P55291 814 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 POLE2P56282 527 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 HSPA14Q0VDF9 509 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 SPP2Q13103 211 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 GAMTQ14353 236 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 ZXDCQ2QGD7 858 aaPredicted RBP6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 ATAD3BQ5T9A4 648 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 TMC5Q6UXY8 1006 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 ZNF852Q6ZMS4 543 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 KRT28Q7Z3Y7 464 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 PLEKHH3Q7Z736 793 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 RASGRP3Q8IV61 690 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 MINDY1Q8N5J2 469 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 CPT1BQ92523 772 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 VCX2Q9H322 139 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 GREM2Q9H772 168 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 DBR1Q9UK59 544 aaKnown RBP6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 SYNGAP1Q96PV0 1343 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 A0A1W2PQM1 296 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 A8MZ25 164 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 KDM4EB2RXH2 506 aaPredicted RBP6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 SPATA31C2B4DYI2 1134 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 M0QYT0 321 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 BCAT2O15382 392 aaPredicted RBP6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 AKAP8O43823 692 aaKnown RBP6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 ZIC2O95409 532 aaPredicted RBP6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 SBK3P0C264 359 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 ITGB8P26012 769 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 CDC25AP30304 524 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 RPL7AP62424 266 aaKnown RBP6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 TGM3Q08188 693 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 TEFQ10587 303 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 SRSF5Q13243 272 aaKnown RBP6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 ITGB3BPQ13352 177 aaPredicted RBP6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 COLEC12Q5KU26 742 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 KCTD11Q693B1 232 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 DGAT2L7PQ6IED9 249 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 GPR142Q7Z601 462 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 CAMKMTQ7Z624 323 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 MRPL10Q7Z7H8 261 aaKnown RBP6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 USP37Q86T82 979 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 RASAL3Q86YV0 1011 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 IRF2BP1Q8IU81 584 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 RHPN2Q8IUC4 686 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 MMP21Q8N119 569 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 DNAJC5GQ8N7S2 189 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 BPIFCQ8NFQ6 507 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 MAFAQ8NHW3 353 aaPredicted RBP6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 ST6GALNAC6Q969X2 333 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 SLAMF9Q96A28 289 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 MSANTD3Q96H12 275 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 KLHL15Q96M94 604 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 UBE2OQ9C0C9 1292 aaKnown RBP6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 TSPYL1Q9H0U9 437 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 IL20RAQ9UHF4 553 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 VPS4AQ9UN37 437 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 GDAQ9Y2T3 454 aa6.34□□□□□ -1.39
TRAPPC11-209ENST00000512476 NINLQ9Y2I6 1382 aa6.34□□□□□ -1.4
TRAPPC11-209ENST00000512476 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 A0A1W2PRX2 142 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 ANKRD61A6NGH8 418 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 F8WDY8 70 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 CLDN3O15551 220 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 DHHO43323 396 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 LIASO43766 372 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 SMNDC1O75940 238 aaKnown RBP eCLIP6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 THRBP10828 461 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 INSRRP14616 1297 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 PFKLP17858 780 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 KRT4P19013 534 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 CD72P21854 359 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 AKT2P31751 481 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 PCGF2P35227 344 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 MAGEA1P43355 309 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 SLC11A2P49281 568 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 PRMT2P55345 433 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms