RNA–Protein interactions for RNA: ENST00000511978.5

MATR3-218, Transcript of matrin 3, human

TSL 3

Gene MATR3, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-218	ENST00000511978	KLHL13	Q9P2N7	655 aa		5.74	□□□□□ -1.49
MATR3-218	ENST00000511978	KIAA0100	Q14667	2235 aa	Known RBP	5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	CYP3A7-CYP3A51P	A0A087WV96	503 aa		5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	CCDC196	A0A1B0GTZ2	297 aa		5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	SMIM35	A0A1B0GVV1	85 aa		5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	HMX3	A6NHT5	357 aa		5.73	□□□□□ -1.49
MATR3-218	ENST00000511978		B4DLN1	442 aa		5.73	□□□□□ -1.49
MATR3-218	ENST00000511978		H0Y3Z8	333 aa		5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	DUSP11	O75319	330 aa	Known RBP	5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	FAM155B	O75949	473 aa		5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	PGK1	P00558	417 aa		5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	RFPL3S	P0C7P2	107 aa		5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	POLR2M	P0CAP2	368 aa		5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	CYP3A7	P24462	503 aa		5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	GRK5	P34947	590 aa		5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	MRPL12	P52815	198 aa	Known RBP	5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	SLC37A1	P57057	533 aa		5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	EVC	P57679	992 aa		5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	DAZAP2	Q15038	168 aa	Predicted RBP	5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	CCDC142	Q17RM4	750 aa		5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	TBRG1	Q3YBR2	411 aa		5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	SLC18B1	Q6NT16	456 aa		5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	RRAGA	Q7L523	313 aa		5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	YTHDF3	Q7Z739	585 aa	Known RBP	5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	TLK2	Q86UE8	772 aa		5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	SRFBP1	Q8NEF9	429 aa	Known RBP	5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	CPT1B	Q92523	772 aa		5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	C3orf49	Q96BT1	292 aa		5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	TAAR1	Q96RJ0	339 aa		5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	FAM118B	Q9BPY3	351 aa		5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	HTATIP2	Q9BUP3	242 aa		5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	SAYSD1	Q9NPB0	183 aa		5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	PXMP2	Q9NR77	195 aa		5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	PDRG1	Q9NUG6	133 aa		5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	MAP3K20	Q9NYL2	800 aa	Known RBP	5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	NDUFAF4	Q9P032	175 aa		5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	MKI67	P46013	3256 aa	Known RBP	5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	FRMPD4	Q14CM0	1322 aa		5.73	□□□□□ -1.49
MATR3-218	ENST00000511978	KIAA1217	Q5T5P2	1943 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	LTBP2	Q14767	1821 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	TBC1D3D	A0A087WVF3	549 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	TBC1D3I	A0A087WXS9	549 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	TBC1D3E	A0A087X179	549 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	TBC1D3K	A0A087X1G2	549 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	TBC1D3B	A6NDS4	549 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	TBC1D3F	A6NER0	549 aa	Predicted RBP	5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	C3orf70	A6NLC5	250 aa	Predicted RBP	5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	TBC1D3L	B9A6J9	549 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	OVOL3	O00110	214 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	DSCR3	O14972	297 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	INPPL1	O15357	1258 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	EIF3J	O75822	258 aa	Known RBP	5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	HEXIM1	O94992	359 aa	Known RBP	5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	PLAU	P00749	431 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	ALDOA	P04075	364 aa	Known RBP	5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	ENO1	P06733	434 aa	Known RBP	5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	TBC1D3H	P0C7X1	549 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	SERPINA4	P29622	427 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	SOX2	P48431	317 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	PRKAA2	P54646	552 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	NAPA	P54920	295 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	MRPS21	P82921	87 aa	Known RBP	5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	CFHR1	Q03591	330 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	DHX8	Q14562	1220 aa	Known RBP	5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	PGM5	Q15124	567 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	PPP2R5B	Q15173	497 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	RPS6KA2	Q15349	733 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	STXBP2	Q15833	593 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	GLE1	Q53GS7	698 aa	Known RBP	5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	ARHGEF16	Q5VV41	709 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	TBC1D3G	Q6DHY5	549 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	TBC1D3C	Q6IPX1	549 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	ZNF474	Q6S9Z5	364 aa	Predicted RBP	5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	RBM44	Q6ZP01	1051 aa	Known RBP	5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	ADGRF3	Q8IZF5	1079 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	TBC1D3	Q8IZP1	549 aa	Predicted RBP	5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	ZNF713	Q8N859	430 aa	Predicted RBP	5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	EXD3	Q8N9H8	876 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	SLC2A12	Q8TD20	617 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	CLEC4C	Q8WTT0	213 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	SCFD2	Q8WU76	684 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	IGFBPL1	Q8WX77	278 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	CUL5	Q93034	780 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	TBC1D20	Q96BZ9	403 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	IWS1	Q96ST2	819 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	UPF3A	Q9H1J1	476 aa	Known RBP	5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	PRDM16	Q9HAZ2	1276 aa		5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	BAZ2B	Q9UIF8	2168 aa	Known RBP	5.72	□□□□□ -1.49
MATR3-218	ENST00000511978	AGAP5	A6NIR3	686 aa		5.71	□□□□□ -1.5
MATR3-218	ENST00000511978	MEIS2	O14770	477 aa		5.71	□□□□□ -1.5
MATR3-218	ENST00000511978	CPLX1	O14810	134 aa		5.71	□□□□□ -1.5
MATR3-218	ENST00000511978	CTAGE5	O15320	804 aa		5.71	□□□□□ -1.5
MATR3-218	ENST00000511978	CNTN5	O94779	1100 aa		5.71	□□□□□ -1.5
MATR3-218	ENST00000511978	PRR35	P0CG20	571 aa		5.71	□□□□□ -1.5
MATR3-218	ENST00000511978	DHRS4L1	P0CG22	281 aa		5.71	□□□□□ -1.5
MATR3-218	ENST00000511978	SCG2	P13521	617 aa		5.71	□□□□□ -1.5
MATR3-218	ENST00000511978	ATP5F1	P24539	256 aa	Predicted RBP	5.71	□□□□□ -1.5
MATR3-218	ENST00000511978	CCND2	P30279	289 aa		5.71	□□□□□ -1.5
MATR3-218	ENST00000511978	ACLY	P53396	1101 aa		5.71	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms