RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 TNFRSF13BO14836 293 aaPredicted RBP3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 KLK8O60259 260 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 PAGE4O60829 102 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 PTP4A3O75365 173 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 IPO7O95373 1038 aaKnown RBP3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 CRYABP02511 175 aaKnown RBP3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 HOXB5P09067 269 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 RARGP13631 454 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 SCP2P22307 547 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 CDC25AP30304 524 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 MAPK4P31152 587 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 SHMT1P34896 483 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 KCNJ4P48050 445 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 F2RL1P55085 397 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 KRTAP10-9P60411 292 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 CSTF3Q12996 717 aaKnown RBP3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 TRAF1Q13077 416 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 LAMB3Q13751 1172 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 ALG11Q2TAA5 492 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 FSCBQ5H9T9 825 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 DNTTIP2Q5QJE6 756 aaKnown RBP3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 FNBP1LQ5T0N5 605 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 FAM205BPQ63HN1 556 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 C11orf87Q6NUJ2 197 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 KLHL35Q6PF15 583 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 NCEH1Q6PIU2 408 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 CCDC129Q6ZRS4 1044 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 C1QL2Q7Z5L3 287 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 IRF2BP2Q7Z5L9 587 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 PCGF5Q86SE9 256 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 HAPLN4Q86UW8 402 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 SLC35F3Q8IY50 421 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 TTC39CQ8N584 583 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 HUS1BQ8NHY5 278 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 TMEM163Q8TC26 289 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 SCFD2Q8WU76 684 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 ARHGEF2Q92974 986 aaKnown RBP3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 ZKSCAN4Q969J2 545 aaPredicted RBP3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 MMABQ96EY8 250 aaPredicted RBP3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 MAP7D2Q96T17 732 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 MSTO1Q9BUK6 570 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 STRA6Q9BX79 667 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 C1QTNF7Q9BXJ2 289 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 FAM234AQ9H0X4 552 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 SYNCQ9H7C4 482 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 POLR1BQ9H9Y6 1135 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 PLAC1Q9HBJ0 212 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 GPR108Q9NPR9 543 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 FZD10Q9ULW2 581 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 FAM237AA0A1B0GTK4 181 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 DYTNA2CJ06 578 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 AKR1B15C9JRZ8 316 aaPredicted RBP3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 ASAP2O43150 1006 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 NDUFB4O95168 129 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 MLYCDO95822 493 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 MMP2P08253 660 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 FGF2P09038 288 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 NAGAP17050 411 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 PIGAP37287 484 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 NR4A2P43354 598 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 OLIG2Q13516 323 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 NAE1Q13564 534 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 NEDD9Q14511 834 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 ZSCAN23Q3MJ62 389 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 GKAP1Q5VSY0 366 aaPredicted RBP3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 DAB2IPQ5VWQ8 1189 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 TYW3Q6IPR3 259 aaKnown RBP3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 ZNF425Q6IV72 752 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 CFAP161Q6P656 301 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 TMEM154Q6P9G4 183 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 CLEC4GQ6UXB4 293 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 FASTKD5Q7L8L6 764 aaKnown RBP3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 ARHGAP12Q8IWW6 846 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 WDTC1Q8N5D0 677 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 SCCPDHQ8NBX0 429 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 BEST2Q8NFU1 509 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 ARRDC2Q8TBH0 407 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 NEK9Q8TD19 979 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 TRIB2Q92519 343 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 SMG7Q92540 1137 aaKnown RBP3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 URB1-AS1Q96HZ7 61 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 CMTM3Q96MX0 182 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 NCAPGQ9BPX3 1015 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 TREX2Q9BQ50 279 aaPredicted RBP3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 NDST4Q9H3R1 872 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 SMARCAD1Q9H4L7 1026 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 SLC28A3Q9HAS3 691 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 OR6C3Q9NZP0 311 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 CNOT8Q9UFF9 292 aaKnown RBP3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 SLCO3A1Q9UIG8 710 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 ZNF215Q9UL58 517 aaPredicted RBP3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 ERVK-11Q9UQG0 969 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 ADAM18Q9Y3Q7 739 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 PTGDR2Q9Y5Y4 395 aa3.51□□□□□ -1.85
TRAPPC11-207ENST00000511409 A0A1B0GVT2 93 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 A0A1W2PRG0 241 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 A6NCN8 305 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 TMEM202A6NGA9 273 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 OR6C75A6NL08 312 aa3.5□□□□□ -1.85
TRAPPC11-207ENST00000511409 SPRY3O43610 288 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms