RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 GPR15P49685 360 aa18■□□□□ 0.47
CCHCR1-228ENST00000509552 ATXN3P54252 364 aaPredicted RBP18■□□□□ 0.47
CCHCR1-228ENST00000509552 INHBCP55103 352 aa18■□□□□ 0.47
CCHCR1-228ENST00000509552 AGKQ53H12 422 aa18■□□□□ 0.47
CCHCR1-228ENST00000509552 GPR158Q5T848 1215 aa18■□□□□ 0.47
CCHCR1-228ENST00000509552 FBXL19Q6PCT2 694 aa18■□□□□ 0.47
CCHCR1-228ENST00000509552 MARVELD2Q8N4S9 558 aa18■□□□□ 0.47
CCHCR1-228ENST00000509552 ASB9Q96DX5 294 aa18■□□□□ 0.47
CCHCR1-228ENST00000509552 TRAF6Q9Y4K3 522 aa18■□□□□ 0.47
CCHCR1-228ENST00000509552 IGLV3-10A0A075B6K4 115 aa18■□□□□ 0.47
CCHCR1-228ENST00000509552 SEPT4O43236 478 aa18■□□□□ 0.47
CCHCR1-228ENST00000509552 CALRP27797 417 aaKnown RBP18■□□□□ 0.47
CCHCR1-228ENST00000509552 GRK4P32298 578 aa18■□□□□ 0.47
CCHCR1-228ENST00000509552 ROR2Q01974 943 aaKnown RBP18■□□□□ 0.47
CCHCR1-228ENST00000509552 LAMB3Q13751 1172 aa18■□□□□ 0.47
CCHCR1-228ENST00000509552 POLD3Q15054 466 aaPredicted RBP18■□□□□ 0.47
CCHCR1-228ENST00000509552 KCNA10Q16322 511 aa18■□□□□ 0.47
CCHCR1-228ENST00000509552 UGT2A3Q6UWM9 527 aa18■□□□□ 0.47
CCHCR1-228ENST00000509552 RPS27LQ71UM5 84 aaKnown RBP18■□□□□ 0.47
CCHCR1-228ENST00000509552 LDB1Q86U70 411 aaPredicted RBP18■□□□□ 0.47
CCHCR1-228ENST00000509552 ZNF280BQ86YH2 543 aa18■□□□□ 0.47
CCHCR1-228ENST00000509552 TRIB2Q92519 343 aa18■□□□□ 0.47
CCHCR1-228ENST00000509552 TRIM4Q9C037 500 aa18■□□□□ 0.47
CCHCR1-228ENST00000509552 UNC93B1Q9H1C4 597 aa18■□□□□ 0.47
CCHCR1-228ENST00000509552 GSTO2Q9H4Y5 243 aa18■□□□□ 0.47
CCHCR1-228ENST00000509552 RGS18Q9NS28 235 aa18■□□□□ 0.47
CCHCR1-228ENST00000509552 CCDC167Q9P0B6 97 aa18■□□□□ 0.47
CCHCR1-228ENST00000509552 PCDHB5Q9Y5E4 795 aa18■□□□□ 0.47
CCHCR1-228ENST00000509552 PCDHGA7Q9Y5G6 932 aa18■□□□□ 0.47
CCHCR1-228ENST00000509552 TTC3P53804 2025 aa18■□□□□ 0.47
CCHCR1-228ENST00000509552 PRSS51A0A1B0GVH4 220 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 AP1G1O43747 822 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 RAMP2O60895 175 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 SUPT7LO94864 414 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 ETFBP38117 255 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 ARSDP51689 593 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 CDKN2DP55273 166 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 TNK2Q07912 1038 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 IL10RBQ08334 325 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 RAP1GAP2Q684P5 730 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 PCDH20Q8N6Y1 951 aaKnown RBP17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 ZFAND2BQ8WV99 257 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 SPATA16Q9BXB7 569 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 TNFRSF12AQ9NP84 129 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 CACNA2D2Q9NY47 1150 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 SUCOQ9UBS9 1254 aaKnown RBP17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 BPTFQ12830 3046 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 C15orf38-AP3S2A0A0A6YYH1 394 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 LOC285095A0A1B0GVY8 99 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 TTC24A2A3L6 582 aaPredicted RBP17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 CCL22O00626 93 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 ADAMTS4O75173 837 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 GLP2RO95838 553 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 SNRPB2P08579 225 aaKnown RBP17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 OR1G1P47890 313 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 PSMD8P48556 350 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 HSPA13P48723 471 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 USP46P62068 366 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 NKX3-2P78367 333 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 TRIM25Q14258 630 aaKnown RBP17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 TLR1Q15399 786 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 TRIP4Q15650 581 aaPredicted RBP17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 PARP15Q460N3 678 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 ZNF678Q5SXM1 525 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 REP15Q6BDI9 236 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 FBXL22Q6P050 247 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 ARPINQ7Z6K5 226 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 MFN1Q8IWA4 741 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 PNPLA1Q8N8W4 532 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 ARRDC2Q8TBH0 407 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 L3HYPDHQ96EM0 354 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 SLC25A23Q9BV35 468 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 OLA1Q9NTK5 396 aaKnown RBP17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 CRYL1Q9Y2S2 319 aa17.99■□□□□ 0.47
CCHCR1-228ENST00000509552 TRPA1O75762 1119 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 HOXB8P17481 243 aaPredicted RBP17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 CTGFP29279 349 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 PBX3P40426 434 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 LRP8Q14114 963 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 PPP1R3AQ16821 1122 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 TMEM207Q6UWW9 146 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 ISCA2Q86U28 154 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 MIB1Q86YT6 1006 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 FAM156AQ8NDB6 213 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 IGSF8Q969P0 613 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 TOP1MTQ969P6 601 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 TADA1Q96BN2 335 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 KLHL32Q96NJ5 620 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 RPRD1AQ96P16 312 aaPredicted RBP17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 PKP2Q99959 881 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 POLR1EQ9GZS1 481 aaKnown RBP17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 HACD3Q9P035 362 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 MARCH4Q9P2E8 410 aaPredicted RBP17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 TBC1D30Q9Y2I9 924 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 TLL2Q9Y6L7 1015 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 OR51F1A6NGY5 319 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 LDB2O43679 373 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 B4GALT3O60512 393 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 DNAJA2O60884 412 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 WISP3O95389 354 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms