RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 MSH2P43246 934 aa4.84□□□□□ -1.63
LINC01088-203ENST00000507476 NEXNQ0ZGT2 675 aa4.84□□□□□ -1.63
LINC01088-203ENST00000507476 GALNT2Q10471 571 aa4.84□□□□□ -1.63
LINC01088-203ENST00000507476 BECN1Q14457 450 aa4.84□□□□□ -1.63
LINC01088-203ENST00000507476 HLFQ16534 295 aa4.84□□□□□ -1.63
LINC01088-203ENST00000507476 CTXN3Q4LDR2 81 aa4.84□□□□□ -1.63
LINC01088-203ENST00000507476 SLC9C2Q5TAH2 1124 aa4.84□□□□□ -1.63
LINC01088-203ENST00000507476 NAA16Q6N069 864 aaPredicted RBP4.84□□□□□ -1.63
LINC01088-203ENST00000507476 FBXL22Q6P050 247 aa4.84□□□□□ -1.63
LINC01088-203ENST00000507476 CASC1Q6TDU7 716 aa4.84□□□□□ -1.63
LINC01088-203ENST00000507476 RAPH1Q70E73 1250 aa4.84□□□□□ -1.63
LINC01088-203ENST00000507476 LRRC8DQ7L1W4 858 aa4.84□□□□□ -1.63
LINC01088-203ENST00000507476 LMNTD2Q8IXW0 634 aa4.84□□□□□ -1.63
LINC01088-203ENST00000507476 C17orf53Q8N3J3 647 aaPredicted RBP4.84□□□□□ -1.63
LINC01088-203ENST00000507476 ENDOVQ8N8Q3 282 aaKnown RBP4.84□□□□□ -1.63
LINC01088-203ENST00000507476 USP38Q8NB14 1042 aa4.84□□□□□ -1.63
LINC01088-203ENST00000507476 INPP4AQ96PE3 977 aaPredicted RBP4.84□□□□□ -1.63
LINC01088-203ENST00000507476 DUX5Q96PT3 197 aa4.84□□□□□ -1.63
LINC01088-203ENST00000507476 TWNKQ96RR1 684 aa4.84□□□□□ -1.63
LINC01088-203ENST00000507476 NPAS1Q99742 590 aa4.84□□□□□ -1.63
LINC01088-203ENST00000507476 MXD3Q9BW11 206 aa4.84□□□□□ -1.63
LINC01088-203ENST00000507476 HDHD5Q9BXW7 423 aa4.84□□□□□ -1.63
LINC01088-203ENST00000507476 MAK16Q9BXY0 300 aaKnown RBP4.84□□□□□ -1.63
LINC01088-203ENST00000507476 TP63Q9H3D4 680 aaPredicted RBP4.84□□□□□ -1.63
LINC01088-203ENST00000507476 RABEP2Q9H5N1 569 aa4.84□□□□□ -1.63
LINC01088-203ENST00000507476 CCDC177Q9NQR7 707 aaPredicted RBP4.84□□□□□ -1.63
LINC01088-203ENST00000507476 PRDM8Q9NQV8 689 aa4.84□□□□□ -1.63
LINC01088-203ENST00000507476 TMEM248Q9NWD8 314 aa4.84□□□□□ -1.63
LINC01088-203ENST00000507476 SUFUQ9UMX1 484 aa4.84□□□□□ -1.63
LINC01088-203ENST00000507476 CNTN6Q9UQ52 1028 aa4.84□□□□□ -1.63
LINC01088-203ENST00000507476 CAMK2AQ9UQM7 478 aa4.84□□□□□ -1.63
LINC01088-203ENST00000507476 CYP46A1Q9Y6A2 500 aa4.84□□□□□ -1.63
LINC01088-203ENST00000507476 EFCAB8A8MWE9 144 aa4.83□□□□□ -1.64
LINC01088-203ENST00000507476 PTGES3LE9PB15 166 aa4.83□□□□□ -1.64
LINC01088-203ENST00000507476 SOCS5O75159 536 aa4.83□□□□□ -1.64
LINC01088-203ENST00000507476 HMMRO75330 724 aa4.83□□□□□ -1.64
LINC01088-203ENST00000507476 GUCY1B2O75343 617 aa4.83□□□□□ -1.64
LINC01088-203ENST00000507476 PTP4A3O75365 173 aa4.83□□□□□ -1.64
LINC01088-203ENST00000507476 KRT36O76013 467 aa4.83□□□□□ -1.64
LINC01088-203ENST00000507476 CCNDBP1O95273 360 aa4.83□□□□□ -1.64
LINC01088-203ENST00000507476 LARGE1O95461 756 aa4.83□□□□□ -1.64
LINC01088-203ENST00000507476 ABCD3P28288 659 aa4.83□□□□□ -1.64
LINC01088-203ENST00000507476 PSMC2P35998 433 aaKnown RBP4.83□□□□□ -1.64
LINC01088-203ENST00000507476 LMAN1P49257 510 aa4.83□□□□□ -1.64
LINC01088-203ENST00000507476 CCR5P51681 352 aa4.83□□□□□ -1.64
LINC01088-203ENST00000507476 RCAN1P53805 252 aa4.83□□□□□ -1.64
LINC01088-203ENST00000507476 TUBA1BP68363 451 aa4.83□□□□□ -1.64
LINC01088-203ENST00000507476 TMF1P82094 1093 aa4.83□□□□□ -1.64
LINC01088-203ENST00000507476 CREB5Q02930 508 aa4.83□□□□□ -1.64
LINC01088-203ENST00000507476 POU3F1Q03052 451 aaPredicted RBP4.83□□□□□ -1.64
LINC01088-203ENST00000507476 BTBD16Q32M84 506 aa4.83□□□□□ -1.64
LINC01088-203ENST00000507476 FAM69AQ5T7M9 428 aa4.83□□□□□ -1.64
LINC01088-203ENST00000507476 FAM171A1Q5VUB5 890 aa4.83□□□□□ -1.64
LINC01088-203ENST00000507476 BBS12Q6ZW61 710 aa4.83□□□□□ -1.64
LINC01088-203ENST00000507476 BTN2A1Q7KYR7 527 aa4.83□□□□□ -1.64
LINC01088-203ENST00000507476 ERC1Q8IUD2 1116 aa4.83□□□□□ -1.64
LINC01088-203ENST00000507476 DIS3L2Q8IYB7 885 aaKnown RBP4.83□□□□□ -1.64
LINC01088-203ENST00000507476 CCAR2Q8N163 923 aaKnown RBP4.83□□□□□ -1.64
LINC01088-203ENST00000507476 TMCO5AQ8N6Q1 288 aa4.83□□□□□ -1.64
LINC01088-203ENST00000507476 ANKRD44Q8N8A2 993 aa4.83□□□□□ -1.64
LINC01088-203ENST00000507476 TMEM255BQ8WV15 326 aa4.83□□□□□ -1.64
LINC01088-203ENST00000507476 SLC35F5Q8WV83 523 aa4.83□□□□□ -1.64
LINC01088-203ENST00000507476 STAMQ92783 540 aa4.83□□□□□ -1.64
LINC01088-203ENST00000507476 ZNF333Q96JL9 665 aa4.83□□□□□ -1.64
LINC01088-203ENST00000507476 REEP2Q9BRK0 252 aa4.83□□□□□ -1.64
LINC01088-203ENST00000507476 DDX23Q9BUQ8 820 aaKnown RBP4.83□□□□□ -1.64
LINC01088-203ENST00000507476 FTOQ9C0B1 505 aaKnown RBP eCLIP4.83□□□□□ -1.64
LINC01088-203ENST00000507476 ATP8A2Q9NTI2 1148 aa4.83□□□□□ -1.64
LINC01088-203ENST00000507476 NDUFAF4Q9P032 175 aa4.83□□□□□ -1.64
LINC01088-203ENST00000507476 C19orf53Q9UNZ5 99 aaPredicted RBP4.83□□□□□ -1.64
LINC01088-203ENST00000507476 IGLV5-52A0A0A0MRZ9 124 aa4.82□□□□□ -1.64
LINC01088-203ENST00000507476 LINC01553A4QN01 128 aa4.82□□□□□ -1.64
LINC01088-203ENST00000507476 TMCC1O94876 653 aa4.82□□□□□ -1.64
LINC01088-203ENST00000507476 MYZAPP0CAP1 466 aa4.82□□□□□ -1.64
LINC01088-203ENST00000507476 CSH1P0DML2 217 aa4.82□□□□□ -1.64
LINC01088-203ENST00000507476 CSH2P0DML3 217 aa4.82□□□□□ -1.64
LINC01088-203ENST00000507476 STMN1P16949 149 aa4.82□□□□□ -1.64
LINC01088-203ENST00000507476 NAGAP17050 411 aa4.82□□□□□ -1.64
LINC01088-203ENST00000507476 TYK2P29597 1187 aa4.82□□□□□ -1.64
LINC01088-203ENST00000507476 ATP5DP30049 168 aa4.82□□□□□ -1.64
LINC01088-203ENST00000507476 HOXC13P31276 330 aa4.82□□□□□ -1.64
LINC01088-203ENST00000507476 UBXN1Q04323 297 aa4.82□□□□□ -1.64
LINC01088-203ENST00000507476 ILF3Q12906 894 aaKnown RBP eCLIP4.82□□□□□ -1.642e-7■■■□□ 17.6
LINC01088-203ENST00000507476 SCARB2Q14108 478 aa4.82□□□□□ -1.64
LINC01088-203ENST00000507476 ZRSR1Q15695 479 aaKnown RBP4.82□□□□□ -1.64
LINC01088-203ENST00000507476 TBCEQ15813 527 aaPredicted RBP4.82□□□□□ -1.64
LINC01088-203ENST00000507476 NFIL3Q16649 462 aa4.82□□□□□ -1.64
LINC01088-203ENST00000507476 TRIM60Q495X7 471 aa4.82□□□□□ -1.64
LINC01088-203ENST00000507476 C5orf22Q49AR2 442 aa4.82□□□□□ -1.64
LINC01088-203ENST00000507476 SLC22A25Q6T423 547 aa4.82□□□□□ -1.64
LINC01088-203ENST00000507476 DNAJB7Q7Z6W7 309 aaPredicted RBP4.82□□□□□ -1.64
LINC01088-203ENST00000507476 PRPF39Q86UA1 669 aaKnown RBP4.82□□□□□ -1.64
LINC01088-203ENST00000507476 RFLNBQ8N5W9 214 aa4.82□□□□□ -1.64
LINC01088-203ENST00000507476 SCAMP5Q8TAC9 235 aa4.82□□□□□ -1.64
LINC01088-203ENST00000507476 ETNPPLQ8TBG4 499 aa4.82□□□□□ -1.64
LINC01088-203ENST00000507476 RUFY2Q8WXA3 655 aa4.82□□□□□ -1.64
LINC01088-203ENST00000507476 KIF1BPQ96EK5 621 aa4.82□□□□□ -1.64
LINC01088-203ENST00000507476 FAM120BQ96EK7 910 aaKnown RBP4.82□□□□□ -1.64
LINC01088-203ENST00000507476 WBP1Q96G27 269 aa4.82□□□□□ -1.64
LINC01088-203ENST00000507476 APOPT1Q96IL0 206 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms