RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 RFPL2O75678 378 aa13.35□□□□□ -0.27
LETM1-203ENST00000505551 CDH1P12830 882 aa13.35□□□□□ -0.27
LETM1-203ENST00000505551 GSTM2P28161 218 aa13.35□□□□□ -0.27
LETM1-203ENST00000505551 CASP3P42574 277 aa13.35□□□□□ -0.27
LETM1-203ENST00000505551 GNG2P59768 71 aa13.35□□□□□ -0.27
LETM1-203ENST00000505551 STX1BP61266 288 aa13.35□□□□□ -0.27
LETM1-203ENST00000505551 COPZ1P61923 177 aa13.35□□□□□ -0.27
LETM1-203ENST00000505551 KIZQ2M2Z5 673 aa13.35□□□□□ -0.27
LETM1-203ENST00000505551 AASDHQ4L235 1098 aaPredicted RBP13.35□□□□□ -0.27
LETM1-203ENST00000505551 GLRA4Q5JXX5 417 aa13.35□□□□□ -0.27
LETM1-203ENST00000505551 SAMD4BQ5PRF9 694 aaKnown RBP13.35□□□□□ -0.27
LETM1-203ENST00000505551 TMC5Q6UXY8 1006 aa13.35□□□□□ -0.27
LETM1-203ENST00000505551 PLD6Q8N2A8 252 aaKnown RBP13.35□□□□□ -0.27
LETM1-203ENST00000505551 CDKL2Q92772 493 aa13.35□□□□□ -0.27
LETM1-203ENST00000505551 UPF1Q92900 1129 aaKnown RBP eCLIP13.35□□□□□ -0.27
LETM1-203ENST00000505551 FUNDC2Q9BWH2 189 aa13.35□□□□□ -0.27
LETM1-203ENST00000505551 ZNF408Q9H9D4 720 aa13.35□□□□□ -0.27
LETM1-203ENST00000505551 SMPD3Q9NY59 655 aaPredicted RBP13.35□□□□□ -0.27
LETM1-203ENST00000505551 TMEM181Q9P2C4 612 aa13.35□□□□□ -0.27
LETM1-203ENST00000505551 SLCO1B7G3V0H7 640 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 SNPHO15079 494 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 IDH3BO43837 385 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 ENDOD1O94919 500 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 FYNP06241 537 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 TFEBP19484 476 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 TBXAS1P24557 533 aaPredicted RBP13.34□□□□□ -0.27
LETM1-203ENST00000505551 SFNP31947 248 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 CDH5P33151 784 aaPredicted RBP13.34□□□□□ -0.27
LETM1-203ENST00000505551 IST1P53990 364 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 P2RX3P56373 397 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 ADARB1P78563 741 aaKnown RBP13.34□□□□□ -0.27
LETM1-203ENST00000505551 GHRHRQ02643 423 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 MMRN1Q13201 1228 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 SLC12A1Q13621 1099 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 STILQ15468 1287 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 TBCELQ5QJ74 424 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 NXNQ6DKJ4 435 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 LINC00523Q86TU6 105 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 FAM9CQ8IZT9 166 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 LSMEM2Q8N112 164 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 SCML4Q8N228 414 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 WDTC1Q8N5D0 677 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 PIK3C3Q8NEB9 887 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 CENPNQ96H22 339 aaPredicted RBP13.34□□□□□ -0.27
LETM1-203ENST00000505551 CDK5RAP1Q96SZ6 601 aaKnown RBP13.34□□□□□ -0.27
LETM1-203ENST00000505551 ZNF518BQ9C0D4 1074 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 SNX15Q9NRS6 342 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 OAZ3Q9UMX2 235 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 EIF3LQ9Y262 564 aaKnown RBP13.34□□□□□ -0.27
LETM1-203ENST00000505551 BRCA1P38398 1863 aaKnown RBP13.34□□□□□ -0.27
LETM1-203ENST00000505551 DOCK5Q9H7D0 1870 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 MUSKO15146 869 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 LTFP02788 710 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 JUNP05412 331 aaKnown RBP13.34□□□□□ -0.27
LETM1-203ENST00000505551 PSAPP07602 524 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 RBL1P28749 1068 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 NAMPTP43490 491 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 ILF2Q12905 390 aaKnown RBP13.34□□□□□ -0.27
LETM1-203ENST00000505551 PRKAA1Q13131 559 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 STX5Q13190 355 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 SELPLGQ14242 412 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 LY6KQ17RY6 165 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 SEZ6Q53EL9 994 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.34□□□□□ -0.27
LETM1-203ENST00000505551 C9orf131Q5VYM1 1079 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 REP15Q6BDI9 236 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 LRRC8EQ6NSJ5 796 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 C8orf82Q6P1X6 216 aaPredicted RBP13.34□□□□□ -0.27
LETM1-203ENST00000505551 SLCO6A1Q86UG4 719 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 VPS33AQ96AX1 596 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 GPRASP2Q96D09 838 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 C12orf42Q96LP6 360 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 FAM213AQ9BRX8 229 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 DSEQ9UL01 958 aa13.34□□□□□ -0.27
LETM1-203ENST00000505551 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.33□□□□□ -0.27
LETM1-203ENST00000505551 FAM149AA5PLN7 773 aa13.33□□□□□ -0.27
LETM1-203ENST00000505551 EI24O14681 340 aa13.33□□□□□ -0.27
LETM1-203ENST00000505551 HNRNPDLO14979 420 aaKnown RBP13.33□□□□□ -0.27
LETM1-203ENST00000505551 GARTP22102 1010 aa13.33□□□□□ -0.27
LETM1-203ENST00000505551 TFDP2Q14188 446 aa13.33□□□□□ -0.27
LETM1-203ENST00000505551 STXBP2Q15833 593 aa13.33□□□□□ -0.27
LETM1-203ENST00000505551 CTF1Q16619 201 aa13.33□□□□□ -0.27
LETM1-203ENST00000505551 UBE2UQ5VVX9 321 aa13.33□□□□□ -0.27
LETM1-203ENST00000505551 ASCC1Q8N9N2 400 aaKnown RBP13.33□□□□□ -0.27
LETM1-203ENST00000505551 GIMAP5Q96F15 307 aa13.33□□□□□ -0.27
LETM1-203ENST00000505551 FTHL17Q9BXU8 183 aa13.33□□□□□ -0.27
LETM1-203ENST00000505551 OXSMQ9NWU1 459 aa13.33□□□□□ -0.27
LETM1-203ENST00000505551 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.33□□□□□ -0.27
LETM1-203ENST00000505551 COL11A1P12107 1806 aaPredicted RBP13.33□□□□□ -0.27
LETM1-203ENST00000505551 E2F8A0AVK6 867 aa13.33□□□□□ -0.28
LETM1-203ENST00000505551 BCLAF3A2AJT9 711 aaKnown RBP13.33□□□□□ -0.28
LETM1-203ENST00000505551 B4GAT1O43505 415 aa13.33□□□□□ -0.28
LETM1-203ENST00000505551 PIGNO95427 931 aa13.33□□□□□ -0.28
LETM1-203ENST00000505551 TRUB2O95900 331 aaKnown RBP13.33□□□□□ -0.28
LETM1-203ENST00000505551 ITGBL1O95965 494 aaPredicted RBP13.33□□□□□ -0.28
LETM1-203ENST00000505551 KRT6AP02538 564 aa13.33□□□□□ -0.28
LETM1-203ENST00000505551 KRT6BP04259 564 aa13.33□□□□□ -0.28
LETM1-203ENST00000505551 TFE3P19532 575 aaPredicted RBP13.33□□□□□ -0.28
LETM1-203ENST00000505551 EEF1B2P24534 225 aaKnown RBP13.33□□□□□ -0.28
LETM1-203ENST00000505551 FASP25445 335 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms