RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 MT-ND3P03897 115 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 PLEKP08567 350 aaPredicted RBP4.27□□□□□ -1.73
CPNE4-204ENST00000505331 PTPN4P29074 926 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 HOXC12P31275 282 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 CASQ1P31415 396 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 ABCD1P33897 745 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 EIF4A3P38919 411 aaKnown RBP4.27□□□□□ -1.73
CPNE4-204ENST00000505331 TXLNAP40222 546 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 CCT6AP40227 531 aaKnown RBP4.27□□□□□ -1.73
CPNE4-204ENST00000505331 USP8P40818 1118 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 CA7P43166 264 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 ME1P48163 572 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 PEX5P50542 639 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 SGSHP51688 502 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 NDST1P52848 882 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 NDST2P52849 883 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 RRADP55042 308 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 HNRNPH2P55795 449 aaKnown RBP4.27□□□□□ -1.73
CPNE4-204ENST00000505331 KCNK10P57789 538 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 ADORA2A-AS1P86434 159 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 CDH18Q13634 790 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 LLGL1Q15334 1064 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 TCEA2Q15560 299 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 ZSCAN26Q16670 478 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 ERCC6LQ2NKX8 1250 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 ALG11Q2TAA5 492 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 EARS2Q5JPH6 523 aaKnown RBP4.27□□□□□ -1.73
CPNE4-204ENST00000505331 PIK3R6Q5UE93 754 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 HGSNATQ68CP4 663 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 SCARA3Q6AZY7 606 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 FAAH2Q6GMR7 532 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 SYT10Q6XYQ8 523 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 C11orf57Q6ZUT1 292 aaPredicted RBP4.27□□□□□ -1.73
CPNE4-204ENST00000505331 MED25Q71SY5 747 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 ERN2Q76MJ5 926 aaKnown RBP4.27□□□□□ -1.73
CPNE4-204ENST00000505331 HDXQ7Z353 690 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 TAF8Q7Z7C8 310 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 SCD5Q86SK9 330 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 AOPEPQ8N6M6 819 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 NECAB1Q8N987 351 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 TMEM102Q8N9M5 508 aaPredicted RBP4.27□□□□□ -1.73
CPNE4-204ENST00000505331 ACRBPQ8NEB7 543 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 COG1Q8WTW3 980 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 COX4I2Q96KJ9 171 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 RBM15Q96T37 977 aaKnown RBP eCLIP4.27□□□□□ -1.73
CPNE4-204ENST00000505331 SPSB2Q99619 263 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 SMOQ99835 787 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 MENTQ9BUN1 341 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 C1QTNF2Q9BXJ5 285 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 HDAC8Q9BY41 377 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 KRTAP17-1Q9BYP8 105 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 DPEP2Q9H4A9 486 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 VIPAS39Q9H9C1 493 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 OLAHQ9NV23 265 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 ZNF446Q9NWS9 450 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 STK17AQ9UEE5 414 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 SERTAD1Q9UHV2 236 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 FEZ2Q9UHY8 353 aaPredicted RBP4.27□□□□□ -1.73
CPNE4-204ENST00000505331 VPS51Q9UID3 782 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 RAB21Q9UL25 225 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 KCNJ14Q9UNX9 436 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 STYXL1Q9Y6J8 313 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 ACANP16112 2415 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 TP53BP1Q12888 1972 aaPredicted RBP4.27□□□□□ -1.73
CPNE4-204ENST00000505331 MXRA5Q9NR99 2828 aa4.27□□□□□ -1.73
CPNE4-204ENST00000505331 MYOFQ9NZM1 2061 aa4.26□□□□□ -1.73
CPNE4-204ENST00000505331 SCN8AQ9UQD0 1980 aa4.26□□□□□ -1.73
CPNE4-204ENST00000505331 IGHV1OR21-1A0A087WYE8 117 aa4.26□□□□□ -1.73
CPNE4-204ENST00000505331 TYW5A2RUC4 315 aaKnown RBP4.26□□□□□ -1.73
CPNE4-204ENST00000505331 B4DGG1 531 aa4.26□□□□□ -1.73
CPNE4-204ENST00000505331 E9PMD0 336 aa4.26□□□□□ -1.73
CPNE4-204ENST00000505331 KPNA3O00505 521 aaPredicted RBP4.26□□□□□ -1.73
CPNE4-204ENST00000505331 MAP2K7O14733 419 aa4.26□□□□□ -1.73
CPNE4-204ENST00000505331 PCDH17O14917 1159 aa4.26□□□□□ -1.73
CPNE4-204ENST00000505331 ATP9BO43861 1147 aa4.26□□□□□ -1.73
CPNE4-204ENST00000505331 WFS1O76024 890 aa4.26□□□□□ -1.73
CPNE4-204ENST00000505331 BEST1O76090 585 aa4.26□□□□□ -1.73
CPNE4-204ENST00000505331 ZWINTO95229 277 aa4.26□□□□□ -1.73
CPNE4-204ENST00000505331 CPP00450 1065 aa4.26□□□□□ -1.73
CPNE4-204ENST00000505331 TNFP01375 233 aa4.26□□□□□ -1.73
CPNE4-204ENST00000505331 TMEM191BP0C7N4 346 aa4.26□□□□□ -1.73
CPNE4-204ENST00000505331 ZNF28P17035 718 aa4.26□□□□□ -1.73
CPNE4-204ENST00000505331 XBP1P17861 261 aa4.26□□□□□ -1.73
CPNE4-204ENST00000505331 BMP6P22004 513 aa4.26□□□□□ -1.73
CPNE4-204ENST00000505331 HTR1BP28222 390 aa4.26□□□□□ -1.73
CPNE4-204ENST00000505331 CSF2RBP32927 897 aa4.26□□□□□ -1.73
CPNE4-204ENST00000505331 TSFMP43897 325 aaKnown RBP4.26□□□□□ -1.73
CPNE4-204ENST00000505331 STK19P49842 368 aaPredicted RBP4.26□□□□□ -1.73
CPNE4-204ENST00000505331 CASP6P55212 293 aa4.26□□□□□ -1.73
CPNE4-204ENST00000505331 WNT7BP56706 349 aa4.26□□□□□ -1.73
CPNE4-204ENST00000505331 MAP3K7CLP57077 242 aa4.26□□□□□ -1.73
CPNE4-204ENST00000505331 SRP54P61011 504 aaKnown RBP4.26□□□□□ -1.73
CPNE4-204ENST00000505331 RPS15P62841 145 aaKnown RBP4.26□□□□□ -1.73
CPNE4-204ENST00000505331 GPLD1P80108 840 aa4.26□□□□□ -1.73
CPNE4-204ENST00000505331 FANCCQ00597 558 aa4.26□□□□□ -1.73
CPNE4-204ENST00000505331 SULT2A1Q06520 285 aa4.26□□□□□ -1.73
CPNE4-204ENST00000505331 NNTQ13423 1086 aa4.26□□□□□ -1.73
CPNE4-204ENST00000505331 BIRC2Q13490 618 aa4.26□□□□□ -1.73
CPNE4-204ENST00000505331 IL10RAQ13651 578 aa4.26□□□□□ -1.73
CPNE4-204ENST00000505331 POSTNQ15063 836 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms