RNA–Protein interactions for RNA: ENST00000504701.5

CDC42SE2-207, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-207ENST00000504701 GP1BAP07359 652 aa22.77■■□□□ 1.24
CDC42SE2-207ENST00000504701 ARL4AP40617 200 aa22.77■■□□□ 1.24
CDC42SE2-207ENST00000504701 DUSP3P51452 185 aaPredicted RBP22.77■■□□□ 1.24
CDC42SE2-207ENST00000504701 RFTN1Q14699 578 aaPredicted RBP22.77■■□□□ 1.24
CDC42SE2-207ENST00000504701 NR0B2Q15466 257 aa22.77■■□□□ 1.24
CDC42SE2-207ENST00000504701 C6orf132Q5T0Z8 1188 aa22.77■■□□□ 1.24
CDC42SE2-207ENST00000504701 TMCO3Q6UWJ1 677 aa22.77■■□□□ 1.24
CDC42SE2-207ENST00000504701 SFTPA2Q8IWL1 248 aa22.77■■□□□ 1.24
CDC42SE2-207ENST00000504701 KYQ8NBH2 561 aa22.77■■□□□ 1.24
CDC42SE2-207ENST00000504701 LRRN4Q8WUT4 740 aa22.77■■□□□ 1.24
CDC42SE2-207ENST00000504701 MRPL40Q9NQ50 206 aaKnown RBP22.77■■□□□ 1.24
CDC42SE2-207ENST00000504701 SIRPGQ9P1W8 387 aa22.77■■□□□ 1.24
CDC42SE2-207ENST00000504701 SEPT3Q9UH03 358 aa22.77■■□□□ 1.24
CDC42SE2-207ENST00000504701 NENFQ9UMX5 172 aa22.77■■□□□ 1.24
CDC42SE2-207ENST00000504701 RAI2Q9Y5P3 530 aa22.77■■□□□ 1.24
CDC42SE2-207ENST00000504701 TPP1O14773 563 aa22.76■■□□□ 1.23
CDC42SE2-207ENST00000504701 USP12O75317 370 aa22.76■■□□□ 1.23
CDC42SE2-207ENST00000504701 MAP3K6O95382 1288 aa22.76■■□□□ 1.23
CDC42SE2-207ENST00000504701 ANXA6P08133 673 aa22.76■■□□□ 1.23
CDC42SE2-207ENST00000504701 CR2P20023 1033 aa22.76■■□□□ 1.23
CDC42SE2-207ENST00000504701 IL4RP24394 825 aa22.76■■□□□ 1.23
CDC42SE2-207ENST00000504701 CASP14P31944 242 aa22.76■■□□□ 1.23
CDC42SE2-207ENST00000504701 GJC1P36383 396 aa22.76■■□□□ 1.23
CDC42SE2-207ENST00000504701 HK3P52790 923 aa22.76■■□□□ 1.23
CDC42SE2-207ENST00000504701 NSUN2Q08J23 767 aaKnown RBP eCLIP22.76■■□□□ 1.23
CDC42SE2-207ENST00000504701 PIGHQ14442 188 aaPredicted RBP22.76■■□□□ 1.23
CDC42SE2-207ENST00000504701 ACAP1Q15027 740 aa22.76■■□□□ 1.23
CDC42SE2-207ENST00000504701 AGERQ15109 404 aa22.76■■□□□ 1.23
CDC42SE2-207ENST00000504701 SOWAHCQ53LP3 525 aaPredicted RBP22.76■■□□□ 1.23
CDC42SE2-207ENST00000504701 BOLA3Q53S33 107 aa22.76■■□□□ 1.23
CDC42SE2-207ENST00000504701 DPPA4Q7L190 304 aa22.76■■□□□ 1.23
CDC42SE2-207ENST00000504701 PAF1Q8N7H5 531 aa22.76■■□□□ 1.23
CDC42SE2-207ENST00000504701 NIPA2Q8N8Q9 360 aa22.76■■□□□ 1.23
CDC42SE2-207ENST00000504701 PCDH19Q8TAB3 1148 aa22.76■■□□□ 1.23
CDC42SE2-207ENST00000504701 OR1E3Q8WZA6 343 aa22.76■■□□□ 1.23
CDC42SE2-207ENST00000504701 SMIM14Q96QK8 99 aa22.76■■□□□ 1.23
CDC42SE2-207ENST00000504701 PACSIN1Q9BY11 444 aa22.76■■□□□ 1.23
CDC42SE2-207ENST00000504701 ABCG4Q9H172 646 aa22.76■■□□□ 1.23
CDC42SE2-207ENST00000504701 USP29Q9HBJ7 922 aa22.76■■□□□ 1.23
CDC42SE2-207ENST00000504701 NOD2Q9HC29 1040 aa22.76■■□□□ 1.23
CDC42SE2-207ENST00000504701 B4GALT6Q9UBX8 382 aa22.76■■□□□ 1.23
CDC42SE2-207ENST00000504701 RABGEF1Q9UJ41 708 aa22.76■■□□□ 1.23
CDC42SE2-207ENST00000504701 TMEM202A6NGA9 273 aa22.75■■□□□ 1.23
CDC42SE2-207ENST00000504701 ELFN1P0C7U0 828 aa22.75■■□□□ 1.23
CDC42SE2-207ENST00000504701 ZNF135P52742 658 aaPredicted RBP22.75■■□□□ 1.23
CDC42SE2-207ENST00000504701 SRP54P61011 504 aaKnown RBP22.75■■□□□ 1.23
CDC42SE2-207ENST00000504701 TPM4P67936 248 aa22.75■■□□□ 1.23
CDC42SE2-207ENST00000504701 TRAF2Q12933 501 aa22.75■■□□□ 1.23
CDC42SE2-207ENST00000504701 ZNF235Q14590 738 aa22.75■■□□□ 1.23
CDC42SE2-207ENST00000504701 ZSCAN23Q3MJ62 389 aa22.75■■□□□ 1.23
CDC42SE2-207ENST00000504701 CCDC122Q5T0U0 273 aa22.75■■□□□ 1.23
CDC42SE2-207ENST00000504701 ALKBH5Q6P6C2 394 aaKnown RBP22.75■■□□□ 1.23
CDC42SE2-207ENST00000504701 LZTR1Q8N653 840 aa22.75■■□□□ 1.23
CDC42SE2-207ENST00000504701 PDCD6IPQ8WUM4 868 aaKnown RBP22.75■■□□□ 1.23
CDC42SE2-207ENST00000504701 DEPDC7Q96QD5 511 aa22.75■■□□□ 1.23
CDC42SE2-207ENST00000504701 LGR4Q9BXB1 951 aa22.75■■□□□ 1.23
CDC42SE2-207ENST00000504701 XPO4Q9C0E2 1151 aaKnown RBP22.75■■□□□ 1.23
CDC42SE2-207ENST00000504701 FGF22Q9HCT0 170 aa22.75■■□□□ 1.23
CDC42SE2-207ENST00000504701 GULP1Q9UBP9 304 aa22.75■■□□□ 1.23
CDC42SE2-207ENST00000504701 KLQ9UEF7 1012 aa22.75■■□□□ 1.23
CDC42SE2-207ENST00000504701 IP6K2Q9UHH9 426 aa22.75■■□□□ 1.23
CDC42SE2-207ENST00000504701 BZW2Q9Y6E2 419 aaKnown RBP22.75■■□□□ 1.23
CDC42SE2-207ENST00000504701 IGSF10Q6WRI0 2623 aa22.75■■□□□ 1.23
CDC42SE2-207ENST00000504701 SMG1Q96Q15 3661 aaKnown RBP22.75■■□□□ 1.23
CDC42SE2-207ENST00000504701 GOLGA6L19H0YKK7 550 aa22.74■■□□□ 1.23
CDC42SE2-207ENST00000504701 MFSD11O43934 449 aa22.74■■□□□ 1.23
CDC42SE2-207ENST00000504701 SSR1P43307 286 aaKnown RBP22.74■■□□□ 1.23
CDC42SE2-207ENST00000504701 ABCG1P45844 678 aa22.74■■□□□ 1.23
CDC42SE2-207ENST00000504701 PEX5P50542 639 aa22.74■■□□□ 1.23
CDC42SE2-207ENST00000504701 CDH6P55285 790 aa22.74■■□□□ 1.23
CDC42SE2-207ENST00000504701 AP1S1P61966 158 aa22.74■■□□□ 1.23
CDC42SE2-207ENST00000504701 GABREP78334 506 aa22.74■■□□□ 1.23
CDC42SE2-207ENST00000504701 CCDC173Q0VFZ6 552 aa22.74■■□□□ 1.23
CDC42SE2-207ENST00000504701 MTM1Q13496 603 aa22.74■■□□□ 1.23
CDC42SE2-207ENST00000504701 TBC1D25Q3MII6 688 aa22.74■■□□□ 1.23
CDC42SE2-207ENST00000504701 FAM182AQ5T1J6 154 aa22.74■■□□□ 1.23
CDC42SE2-207ENST00000504701 ATPAF2Q8N5M1 289 aa22.74■■□□□ 1.23
CDC42SE2-207ENST00000504701 SNIP1Q8TAD8 396 aaKnown RBP22.74■■□□□ 1.23
CDC42SE2-207ENST00000504701 TEKT4Q8WW24 435 aa22.74■■□□□ 1.23
CDC42SE2-207ENST00000504701 ATXN7L3BQ96GX2 97 aa22.74■■□□□ 1.23
CDC42SE2-207ENST00000504701 NAF1Q96HR8 494 aaKnown RBP22.74■■□□□ 1.23
CDC42SE2-207ENST00000504701 TBATAQ96M53 351 aa22.74■■□□□ 1.23
CDC42SE2-207ENST00000504701 WDR92Q96MX6 357 aa22.74■■□□□ 1.23
CDC42SE2-207ENST00000504701 ZNF599Q96NL3 588 aa22.74■■□□□ 1.23
CDC42SE2-207ENST00000504701 MGME1Q9BQP7 344 aa22.74■■□□□ 1.23
CDC42SE2-207ENST00000504701 LUC7L2Q9Y383 392 aaKnown RBP22.74■■□□□ 1.23
CDC42SE2-207ENST00000504701 TOR1BO14657 336 aa22.73■■□□□ 1.23
CDC42SE2-207ENST00000504701 HTRA2O43464 458 aaPredicted RBP22.73■■□□□ 1.23
CDC42SE2-207ENST00000504701 ARSEP51690 589 aa22.73■■□□□ 1.23
CDC42SE2-207ENST00000504701 PDX1P52945 283 aa22.73■■□□□ 1.23
CDC42SE2-207ENST00000504701 TAS2R40P59535 323 aa22.73■■□□□ 1.23
CDC42SE2-207ENST00000504701 KRT81Q14533 505 aa22.73■■□□□ 1.23
CDC42SE2-207ENST00000504701 IHHQ14623 411 aa22.73■■□□□ 1.23
CDC42SE2-207ENST00000504701 ACOX1Q15067 660 aa22.73■■□□□ 1.23
CDC42SE2-207ENST00000504701 CNGA3Q16281 694 aa22.73■■□□□ 1.23
CDC42SE2-207ENST00000504701 ISXQ2M1V0 245 aa22.73■■□□□ 1.23
CDC42SE2-207ENST00000504701 DENND2CQ68D51 928 aa22.73■■□□□ 1.23
CDC42SE2-207ENST00000504701 ZNF564Q8TBZ8 553 aaPredicted RBP22.73■■□□□ 1.23
CDC42SE2-207ENST00000504701 NUDCD1Q96RS6 583 aa22.73■■□□□ 1.23
CDC42SE2-207ENST00000504701 CCDC3Q9BQI4 270 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms